TomoSeq data search

Data search

Results for MligTC455_35958

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35958

770

16.04

Mlig455_026638

Neo: -

Age: Up-Down-Up

RAB32

Mlig455_026638 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=147.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=102.9]; ADP-ribosylation factor family [PF00025.23, score=55.1]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=23.1]; RsgA GTPase [PF03193.18, score=19.0]} {Human: ENSG00000118508, RAB32, RAB32, member RAS oncogene family, [Score=184, Expect=8e-58]; ENSG00000123892, RAB38, RAB38, member RAS oncogene family, [Score=177, Expect=1e-55]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=182, Expect=2e-57]; ENSMUSG00000030559, Rab38, RAB38, member RAS oncogene family, [Score=177, Expect=8e-56]} {Dmel: FBgn0002567, Rab32, [Score=190, Expect=6e-61]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=159, Expect=1e-48]} {Smed: dd_Smed_v6_1037_0_1, dd_Smed_v6_1037_0_1, [Score=161, Expect=9e-50]} {RNA1509_49076} {RNA1310_25952} {RNA815_23958.2}

Cumulative graph for MligTC455_35958

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.047	4.301	0.34622	0.98992
RegionR2	-0.235	4.301	0.52825	0.90007
RegionR3	0.315	4.301	0.27927	0.82289
RegionR4	0.734	4.301	0.04398	0.17687
RegionR5	0.29	4.301	0.29928	0.63436
RegionR6	0.348	4.301	0.24972	0.83581
RegionR7	-0.315	4.301	0.46730	1.00000
RegionR8	-0.09	4.301	0.85984	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.448	4.301	0.77187	1.00000
RegenerationR2	-0.169	4.301	0.52957	0.88405
RegenerationR3	-0.781	4.301	0.01141	0.19496
RegenerationR4	-0.543	4.301	0.09473	0.47915
RegenerationR5	-0.239	4.301	0.40221	0.80043
RegenerationR6	-0.605	4.301	0.06064	0.30962
RegenerationBL	-0.684	4.301	0.13259	0.43387
RegenerationTP	-0.346	4.301	0.45652	0.87217

Genes with expression patterns similar to MligTC455_35958

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35958	770	16.04	Mlig455_026638	Neo: - Age: Up-Down-Up	RAB32	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026638 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=147.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=102.9]; ADP-ribosylation factor family [PF00025.23, score=55.1]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=23.1]; RsgA GTPase [PF03193.18, score=19.0]} {Human: ENSG00000118508, RAB32, RAB32, member RAS oncogene family, [Score=184, Expect=8e-58]; ENSG00000123892, RAB38, RAB38, member RAS oncogene family, [Score=177, Expect=1e-55]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=182, Expect=2e-57]; ENSMUSG00000030559, Rab38, RAB38, member RAS oncogene family, [Score=177, Expect=8e-56]} {Dmel: FBgn0002567, Rab32, [Score=190, Expect=6e-61]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=159, Expect=1e-48]} {Smed: dd_Smed_v6_1037_0_1, dd_Smed_v6_1037_0_1, [Score=161, Expect=9e-50]} {RNA1509_49076} {RNA1310_25952} {RNA815_23958.2}
2.	MligTC455_35957	838	17.46	Mlig455_026548	Neo: - Age: -	RAB32	4.851	0.998	0.999	-	0.969	0.947	0.938	Mlig455_026548 {REF} {Length: 4076} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=149.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=101.3]; ADP-ribosylation factor family [PF00025.23, score=56.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=25.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.7]; Conserved hypothetical ATP binding protein [PF03029.19, score=23.7]; RsgA GTPase [PF03193.18, score=20.5]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=18.5]} {Human: ENSG00000118508, RAB32, RAB32, member RAS oncogene family, [Score=184, Expect=4e-58]; ENSG00000123892, RAB38, RAB38, member RAS oncogene family, [Score=179, Expect=2e-56]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=186, Expect=1e-58]; ENSMUSG00000030559, Rab38, RAB38, member RAS oncogene family, [Score=180, Expect=1e-56]} {Dmel: FBgn0002567, Rab32, [Score=193, Expect=4e-62]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=161, Expect=1e-49]} {Smed: dd_Smed_v6_1037_0_1, dd_Smed_v6_1037_0_1, [Score=163, Expect=1e-50]} {RNA1509_49076} {RNA1310_25952} {RNA815_23958.2}
3.	MligTC455_31510	978	20.37	Mlig455_050155	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.020	LAMB4	0.956	-	-	-	-	-	0.956	Mlig455_050155 {REF} {Length: 22508} {TRANSSPLICED} {Pfam: Autophagy protein 16 (ATG16) [PF08614.13, score=30.3]; Crescentin protein [PF19220.2, score=28.5]; HOOK protein coiled-coil region [PF05622.14, score=20.2]; Mitotic checkpoint protein [PF05557.15, score=18.2]} {Human: ENSG00000091128, LAMB4, laminin subunit beta 4, [Score=63.2, Expect=3e-08]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=55.1, Expect=4e-06]} {Smed: dd_Smed_v6_9784_0_3, dd_Smed_v6_9784_0_3, [Score=86.7, Expect=6e-16]} {RNA1509_13842} {RNA1310_120.1} {RNA815_543.1}
4.	MligTC455_44610	2287	47.65	Mlig455_056905	Neo: - Age: -	FUNDC1	0.953	-	-	-	0.953	-	-	Mlig455_056905 {REF} {Length: 1221} {TRANSSPLICED} {Pfam: FUN14 family [PF04930.17, score=69.2]} {Human: ENSG00000069509, FUNDC1, FUN14 domain containing 1, [Score=68.9, Expect=1e-14]} {Mouse: ENSMUSG00000025040, Fundc1, FUN14 domain containing 1, [Score=68.6, Expect=9e-15]} {Dmel: FBgn0032200, CG5676, [RH, Score=65.1, Expect=1e-13]} {RNA1509_5972} {RNA1310_27140.1} {RNA815_15383}
5.	MligTC455_49643	1190	24.79	Mlig455_035158	Neo: - Age: -	GRAMD1B	0.953	-	-	-	0.953	-	-	Mlig455_035158 {REF} {Length: 3651} {TRANSSPLICED} {Pfam: VAD1 Analog of StAR-related lipid transfer domain [PF16016.7, score=89.9]; GRAM domain [PF02893.22, score=69.8]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=224, Expect=1e-62]; ENSG00000178075, GRAMD1C, GRAM domain containing 1C, [RH, Score=219, Expect=5e-61]} {Mouse: ENSMUSG00000040111, Gramd1b, GRAM domain containing 1B, [RH, Score=223, Expect=3e-62]; ENSMUSG00000036292, Gramd1c, GRAM domain containing 1C, [RH, Score=212, Expect=1e-58]} {Dmel: FBgn0085423, CG34394, [Score=142, Expect=2e-34]} {Celegans: WBGene00022593, ZC328.3, [RH, Score=132, Expect=8e-32]} {Smed: dd_Smed_v6_9149_0_1, dd_Smed_v6_9149_0_1, [RH, Score=188, Expect=5e-51]} {RNA1509_11905, RNA1509_14267} {RNA1310_5700, RNA1509_11905, RNA1509_14267} {RNA1509_11905, RNA1509_14267, RNA815_13670}

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