Data search
Results for MligTC455_49712
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49712 | 1937 | 40.36 | Mlig455_003035 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.123/0.00246 |
GALE | Mlig455_003035 {REF} {Length: 2329} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=200.7]; NAD dependent epimerase/dehydratase family [PF01370.23, score=183.7]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=64.0]; Polysaccharide biosynthesis protein [PF02719.17, score=62.2]; RmlD substrate binding domain [PF04321.19, score=50.0]; NAD(P)H-binding [PF13460.8, score=35.7]; Male sterility protein [PF07993.14, score=35.5]; short chain dehydrogenase [PF00106.27, score=30.5]; KR domain [PF08659.12, score=29.3]; NmrA-like family [PF05368.15, score=18.7]} {Human: ENSG00000117308, GALE, UDP-galactose-4-epimerase, [RH, Score=454, Expect=7e-161]} {Mouse: ENSMUSG00000028671, Gale, galactose-4-epimerase, UDP, [RH, Score=454, Expect=6e-161]} {Dmel: FBgn0035147, Gale, UDP-galactose 4'-epimerase, [RH, Score=430, Expect=1e-151]} {Celegans: WBGene00008132, gale-1, UDP-GALactose 4-Epimerase, [RH, Score=415, Expect=8e-146]} {Smed: dd_Smed_v6_1201_0_1, dd_Smed_v6_1201_0_1, [RH, Score=432, Expect=1e-152]} {RNA1509_23959, RNA1509_8326} {RNA1310_16764.2, RNA1509_23959, RNA1509_8326} {RNA1509_23959, RNA1509_8326, RNA815_12053} |
Cumulative graph for MligTC455_49712
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.763 | 5.454 | 0.03080 | 0.44815 | |
| RegionR2 | -0.2 | 5.454 | 0.51202 | 0.88945 | |
| RegionR3 | 0.493 | 5.454 | 0.04382 | 0.36531 | |
| RegionR4 | 1.123 | 5.454 | 0.00017 | 0.00246 | |
| RegionR5 | 0.595 | 5.454 | 0.01262 | 0.06855 | |
| RegionR6 | 0.702 | 5.454 | 0.00482 | 0.10657 | |
| RegionR7 | -0.209 | 5.454 | 0.53554 | 1.00000 | |
| RegionR8 | -0.741 | 5.454 | 0.09064 | 0.56911 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.506 | 5.454 | 0.13822 | 0.87412 | |
| RegenerationR2 | -0.177 | 5.454 | 0.47765 | 0.86204 | |
| RegenerationR3 | -0.295 | 5.454 | 0.26807 | 0.70228 | |
| RegenerationR4 | -0.219 | 5.454 | 0.42412 | 0.82772 | |
| RegenerationR5 | -0.229 | 5.454 | 0.36943 | 0.77969 | |
| RegenerationR6 | -0.642 | 5.454 | 0.01919 | 0.17090 | |
| RegenerationBL | 0.686 | 5.454 | 0.02032 | 0.15433 | |
| RegenerationTP | 0.164 | 5.454 | 0.65846 | 0.99319 |
Genes with expression patterns similar to MligTC455_49712
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49712 | 1937 | 40.36 | Mlig455_003035 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.123/0.00246 |
GALE | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003035 {REF} {Length: 2329} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=200.7]; NAD dependent epimerase/dehydratase family [PF01370.23, score=183.7]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=64.0]; Polysaccharide biosynthesis protein [PF02719.17, score=62.2]; RmlD substrate binding domain [PF04321.19, score=50.0]; NAD(P)H-binding [PF13460.8, score=35.7]; Male sterility protein [PF07993.14, score=35.5]; short chain dehydrogenase [PF00106.27, score=30.5]; KR domain [PF08659.12, score=29.3]; NmrA-like family [PF05368.15, score=18.7]} {Human: ENSG00000117308, GALE, UDP-galactose-4-epimerase, [RH, Score=454, Expect=7e-161]} {Mouse: ENSMUSG00000028671, Gale, galactose-4-epimerase, UDP, [RH, Score=454, Expect=6e-161]} {Dmel: FBgn0035147, Gale, UDP-galactose 4'-epimerase, [RH, Score=430, Expect=1e-151]} {Celegans: WBGene00008132, gale-1, UDP-GALactose 4-Epimerase, [RH, Score=415, Expect=8e-146]} {Smed: dd_Smed_v6_1201_0_1, dd_Smed_v6_1201_0_1, [RH, Score=432, Expect=1e-152]} {RNA1509_23959, RNA1509_8326} {RNA1310_16764.2, RNA1509_23959, RNA1509_8326} {RNA1509_23959, RNA1509_8326, RNA815_12053} |
| 2. | MligTC455_04116 | 732 | 15.25 | Mlig455_004958 | Neo: - Age: - |
1.661 | - | - | 0.703 | - | - | 0.958 | Mlig455_004958 {REF} {Length: 91} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_24806} {RNA1310_74040} {RNA815_29739} | |
| 3. | MligTC455_04117 | 310 | 6.45 | Mlig455_019700 | Neo: - Age: - |
GLCE | 0.968 | - | - | - | - | - | 0.968 | Mlig455_019700 {REF} {Length: 4930} {TRANSSPLICED} {Pfam: D-glucuronyl C5-epimerase C-terminus [PF06662.15, score=142.0]} {Human: ENSG00000138604, GLCE, glucuronic acid epimerase, [RH, Score=173, Expect=1e-44]} {Mouse: ENSMUSG00000032252, Glce, glucuronyl C5-epimerase, [RH, Score=174, Expect=3e-45]} {Dmel: FBgn0033087, Hsepi, Heparan sulfate C5-epimerase, [RH, Score=178, Expect=8e-47]} {Celegans: WBGene00002003, hse-5, D-glucuronyl C5-epimerase, [RH, Score=171, Expect=1e-44]} {Smed: dd_Smed_v6_10357_0_1, dd_Smed_v6_10357_0_1, [RH, Score=151, Expect=3e-38]} {RNA1509_13293, RNA1509_23264} {RNA1310_9347, RNA1509_23264} {RNA1509_23264, RNA815_9339} |
| 4. | MligTC455_29334 | 663 | 13.82 | Mlig455_017157 | Neo: - Age: - |
DOCK9 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_017157 {REF} {Length: 8639} {Pfam: Dock homology region 2 [PF06920.15, score=402.2]; C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=119.8]; Domain of unknown function (DUF3398) [PF11878.10, score=29.4]} {Human: ENSG00000088387, DOCK9, dedicator of cytokinesis 9, [RH, Score=390, Expect=4e-111]} {Mouse: ENSMUSG00000025558, Dock9, dedicator of cytokinesis 9, [Score=761, Expect=0.0]} {Dmel: FBgn0260486, Ziz, Zizimin, [RH, Score=364, Expect=4e-101]} {Celegans: WBGene00018520, F46H5.4, [Score=221, Expect=2e-57]} {Smed: dd_Smed_v6_2660_0_5, dd_Smed_v6_2660_0_5, [RH, Score=297, Expect=8e-81]} {RNA1509_4678} {RNA1310_527.1, RNA1509_4678} {RNA1509_4678, RNA815_3082} |
| 5. | MligTC455_30212 | 8627 | 179.72 | Mlig455_009854 | Neo: - Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.330/0.00000 Regeneration-upregulated BL: 1.070 Regeneration-enriched BL: 1.070 |
SEC61B | 0.96 | - | - | - | 0.960 | - | - | Mlig455_009854 {REF} {Length: 2918} {Pfam: Sec61beta family [PF03911.18, score=68.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=126, Expect=9e-38]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=127, Expect=5e-38]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=125, Expect=2e-37]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=93.2, Expect=3e-25]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=110, Expect=1e-31]} {RNA1509_12138, RNA1509_20916, RNA1509_4964} {RNA1310_29478.1, RNA1509_20916, RNA1509_4964} {RNA1509_20916, RNA1509_4964, RNA815_15688} |
| 6. | MligTC455_30213 | 8844 | 184.24 | Mlig455_010339 | Neo: - Age: logFC(26M/2M)=0.253 Region-enriched R5: 1.368/0.00000 Regeneration-upregulated BL: 1.090 Regeneration-enriched BL: 1.090 |
SEC61B | 0.958 | - | - | - | 0.958 | - | - | Mlig455_010339 {REF} {Length: 1341} {Pfam: Sec61beta family [PF03911.18, score=69.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=126, Expect=7e-39]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=126, Expect=3e-39]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=4e-32]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=92.4, Expect=4e-26]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=112, Expect=5e-34]} {RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1310_29478.1, RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1509_12138, RNA1509_2065, RNA1509_36570, RNA815_15688} |
| 7. | MligTC455_29336 | 634 | 13.2 | Mlig455_048109 | Neo: - Age: Up-Down-Up |
DOCK9 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_048109 {REF} {Length: 4298} {Pfam: Dock homology region 2 [PF06920.15, score=365.8]} {Human: ENSG00000088387, DOCK9, dedicator of cytokinesis 9, [Score=362, Expect=3e-106]; ENSG00000147251, DOCK11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Mouse: ENSMUSG00000025558, Dock9, dedicator of cytokinesis 9, [Score=365, Expect=2e-107]; ENSMUSG00000031093, Dock11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Dmel: FBgn0260486, Ziz, Zizimin, [Score=332, Expect=2e-96]} {Celegans: WBGene00018520, F46H5.4, [Score=200, Expect=2e-52]} {Smed: dd_Smed_v6_2660_0_8, dd_Smed_v6_2660_0_8, [Score=272, Expect=2e-76]} {RNA1509_10943} {RNA1310_1197.2} {RNA815_16972} |
Berezikov Lab - 2020-2021 © ERIBA