Data search
Results for MligTC455_49756
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49756 | 70 | 1.46 | Mlig455_049321 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.704 Region-enriched R4: 4.830/0.04843 |
SAMM50 | Mlig455_049321 {REF} {Length: 2363} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=90.1]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [Score=175, Expect=3e-49]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [Score=175, Expect=2e-49]} {Dmel: FBgn0033989, CG7639, [Score=86.7, Expect=4e-18]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [Score=126, Expect=4e-32]} {RNA1509_11061} {RNA1310_15228} {RNA815_7353} |
Cumulative graph for MligTC455_49756
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.48 | 1.673 | 1.00000 | 1.00000 | |
| RegionR2 | -0.633 | 1.673 | 0.91441 | 1.00000 | |
| RegionR3 | 1.2 | 1.673 | 0.32258 | 0.86065 | |
| RegionR4 | 4.83 | 1.673 | 0.00733 | 0.04843 | |
| RegionR5 | 2.957 | 1.673 | 0.00825 | 0.05017 | |
| RegionR6 | 0.542 | 1.673 | 0.64268 | 1.00000 | |
| RegionR7 | -5.46 | 1.673 | 1.00000 | 1.00000 | |
| RegionR8 | -2.956 | 1.673 | 0.99629 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.28 | 1.673 | 0.99993 | 1.00000 | |
| RegenerationR2 | -1.599 | 1.673 | 0.15266 | 0.58775 | |
| RegenerationR3 | -1.375 | 1.673 | 0.21455 | 0.65106 | |
| RegenerationR4 | -1.173 | 1.673 | 0.31307 | 0.75256 | |
| RegenerationR5 | -0.864 | 1.673 | 0.33662 | 0.75529 | |
| RegenerationR6 | -1.679 | 1.673 | 0.25574 | 0.60606 | |
| RegenerationBL | 4.192 | 1.673 | 0.03465 | 0.20944 | |
| RegenerationTP | 1.865 | 1.673 | 0.45693 | 0.87240 |
Genes with expression patterns similar to MligTC455_49756
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49756 | 70 | 1.46 | Mlig455_049321 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.704 Region-enriched R4: 4.830/0.04843 |
SAMM50 | 5 | 1.000 | 1.000 | 1.000 | 1.000 | - | 1.000 | Mlig455_049321 {REF} {Length: 2363} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=90.1]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [Score=175, Expect=3e-49]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [Score=175, Expect=2e-49]} {Dmel: FBgn0033989, CG7639, [Score=86.7, Expect=4e-18]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [Score=126, Expect=4e-32]} {RNA1509_11061} {RNA1310_15228} {RNA815_7353} |
| 2. | MligTC455_45697 | 73 | 1.52 | Mlig455_035324 | Neo: - Age: Down-Up-Down |
1.841 | - | - | - | 0.953 | - | 0.888 | Mlig455_035324 {REF} {Length: 1993} {TRANSSPLICED} {RNA1509_32885} {RNA1310_36246.2} {RNA815_24351} | |
| 3. | MligTC455_07391 | 14 | 0.28 | Mlig455_003550 | Neo: - Age: - |
0.979 | - | - | - | 0.979 | - | - | Mlig455_003550 {REF} {Length: 244} {NoTransDecoderORF} {RNA1509_42122} | |
| 4. | MligTC455_07392 | 18 | 0.37 | Mlig455_060740 | Neo: - Age: - |
0.979 | - | - | - | 0.979 | - | - | Mlig455_060740 {REF} {Length: 277} {NoTransDecoderORF} {RNA1509_42122} | |
| 5. | MligTC455_49366 | 486 | 10.13 | Mlig455_023586, Mlig455_050166 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.530 Region-enriched R5: 1.681/0.03689 |
NCBP3 | 0.977 | - | - | - | - | - | 0.977 | Mlig455_023586 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_39208, RNA1509_50478, RNA1509_6697} {RNA1310_4269, RNA1509_39208, RNA1509_50478} {RNA1509_39208, RNA1509_50478, RNA815_8318} Mlig455_050166 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=3e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_50478} {RNA1310_4269} {RNA815_8318} |
| 6. | MligTC455_21462 | 18 | 0.38 | Mlig455_013221 | Neo: - Age: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_013221 {REF} {Length: 1150} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38412} {RNA1310_33160.1} {RNA815_51877} | |
| 7. | MligTC455_14344 | 18 | 0.37 | Mlig455_032388 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_032388 {REF} {Length: 1352} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=18.9]} {RNA1509_41164} {RNA1310_43056.1} {RNA815_34568.1} | |
| 8. | MligTC455_39182 | 567 | 11.81 | Mlig455_061295, Mlig455_062653 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.232/0.01716 |
NCAPH | 0.968 | - | - | - | - | - | 0.968 | Mlig455_061295 {REF} {Length: 3956} {Pfam: Condensin complex subunit 2 [PF05786.16, score=263.4]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=3e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=132, Expect=2e-31]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=6e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=158, Expect=6e-40]} {RNA1509_7623} {RNA1310_2562.1} {RNA815_8919} Mlig455_062653 {REF} {Length: 3594} {Pfam: Condensin complex subunit 2 [PF05786.16, score=262.5]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=5e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=131, Expect=3e-31]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=6e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [RH, Score=160, Expect=1e-40]} {RNA1509_7623} {RNA1310_3381, RNA1509_7623} {RNA1509_7623, RNA815_8919} |
| 9. | MligTC455_07314 | 687 | 14.32 | Mlig455_000525 | Neo: Irradiation Age: - Region-enriched R5: 1.319/0.00385 |
SIN3B | 0.966 | - | - | - | - | - | 0.966 | Mlig455_000525 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=97.0]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=186, Expect=1e-48]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=196, Expect=3e-52]} {Dmel: FBgn0022764, Sin3A, [Score=147, Expect=2e-36]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=97.4, Expect=9e-21]} {RNA1509_4899} {RNA1310_4266.2} {RNA815_1997} |
| 10. | MligTC455_07315 | 1412 | 29.41 | Mlig455_000426, Mlig455_024855 | Neo: - Age: - Region-enriched R5: 1.338/0.00399 |
SIN3A, SIN3B | 0.966 | - | - | - | - | - | 0.966 | Mlig455_000426 {REF} {Length: 2868} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=98.6]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=144, Expect=2e-35]; ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=137, Expect=5e-33]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=160, Expect=2e-40]} {Dmel: FBgn0022764, Sin3A, [Score=108, Expect=4e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=71.6, Expect=1e-12]} {RNA1509_4899} {RNA1310_3136.1} {RNA815_1997} Mlig455_024855 {REF} {Length: 6647} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=79.7]; Bacterial protein of unknown function (DUF937) [PF06078.13, score=19.1]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=110, Expect=3e-25]; ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=107, Expect=4e-24]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=141, Expect=1e-35]} {Dmel: FBgn0022764, Sin3A, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=67.8, Expect=6e-12]} {RNA1509_56147} {RNA1310_3136.1} {RNA815_14715} |
| 11. | MligTC455_20576 | 15 | 0.31 | Mlig455_063175 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_063175 {REF} {Length: 1776} {NoTransDecoderORF} {RNA1509_9056} {RNA1310_56777} {RNA815_24608} | |
| 12. | MligTC455_29366 | 7 | 0.15 | Mlig455_064841 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_064841 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_56994} {RNA1310_41612.1} {RNA815_34055.1} | |
| 13. | MligTC455_39181 | 265 | 5.52 | Mlig455_061266 | Neo: Int S/G2/M Age: - Region-specific R4: 3.386 |
NCAPH | 0.963 | - | - | - | - | - | 0.963 | Mlig455_061266 {REF} {Length: 4275} {Pfam: Condensin complex subunit 2 [PF05786.16, score=260.1]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=5e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=129, Expect=2e-30]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=5e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [RH, Score=159, Expect=4e-40]} {RNA1509_7623} {RNA1310_2562.1} {RNA815_8919} |
| 14. | MligTC455_09419 | 952 | 19.83 | Mlig455_028591, Mlig455_028608 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.336 Region-enriched R5: 1.990/0.00000 |
ENGASE, RNASEH2B | 0.962 | - | - | - | - | - | 0.962 | Mlig455_028591 {REF} {Length: 1343} {TRANSSPLICED} {Pfam: Ydr279p protein triple barrel domain [PF17745.3, score=28.3]} {Human: ENSG00000136104, RNASEH2B, ribonuclease H2 subunit B, [RH, Score=67.4, Expect=3e-12]} {Mouse: ENSMUSG00000021932, Rnaseh2b, ribonuclease H2, subunit B, [RH, Score=57.4, Expect=5e-09]} {Smed: dd_Smed_v6_20152_0_1, dd_Smed_v6_20152_0_1, [RH, Score=65.9, Expect=3e-12]} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1310_23646.1, RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114, RNA815_10770.1} Mlig455_028608 {REF} {Length: 2849} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 85 [PF03644.15, score=256.7]} {Human: ENSG00000167280, ENGASE, endo-beta-N-acetylglucosaminidase, [RH, Score=208, Expect=5e-61]} {Mouse: ENSMUSG00000033857, Engase, endo-beta-N-acetylglucosaminidase, [RH, Score=196, Expect=7e-57]} {Dmel: FBgn0030839, CG5613, [RH, Score=202, Expect=1e-59]} {Celegans: WBGene00017164, eng-1, Endo-b-N-acetylGlucosaminidase; Endo-beta-N-acetylglucosaminidase, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_12165_0_3, dd_Smed_v6_12165_0_3, [RH, Score=205, Expect=2e-63]} {RNA1509_24522} {RNA1310_22368} {RNA815_10770.1} |
| 15. | MligTC455_44967 | 402 | 8.38 | Mlig455_050720 | Neo: Int S/G2/M Age: - |
NUP133 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_050720 {REF} {Length: 7508} {TRANSSPLICED} {Pfam: Non-repetitive/WGA-negative nucleoporin C-terminal [PF03177.16, score=65.8]} {Human: ENSG00000069248, NUP133, nucleoporin 133, [RH, Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000039509, Nup133, nucleoporin 133, [RH, Score=163, Expect=1e-39]} {Dmel: FBgn0039004, Nup133, Nucleoporin 133kD, [RH, Score=102, Expect=3e-21]} {Smed: dd_Smed_v6_5977_0_1, dd_Smed_v6_5977_0_1, [RH, Score=55.1, Expect=5e-07]} {RNA1509_31103, RNA1509_9832} {RNA1310_2306.1, RNA1509_31103, RNA1509_9832} {RNA1509_31103, RNA1509_9832, RNA815_1062} |
| 16. | MligTC455_03811 | 137 | 2.86 | Mlig455_059752 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.549 Region-enriched R5: 2.817/0.03538 Regeneration-upregulated BL: 5.746 Regeneration-enriched BL: 5.746 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_059752 {REF} {Length: 1765} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=20.9]} {RNA1509_23883} {RNA1310_27272} {RNA815_26918} | |
| 17. | MligTC455_42306 | 864 | 18 | Mlig455_020699, Mlig455_020767 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_020699 {REF} {Length: 1825} {TRANSSPLICED} {RNA1509_29217, RNA1509_45221, RNA1509_49303} {RNA1310_16148.1, RNA1509_29217, RNA1509_45221, RNA1509_49303} {RNA1509_29217, RNA1509_45221, RNA1509_49303, RNA815_19582} Mlig455_020767 {REF} {Length: 1819} {TRANSSPLICED} {RNA1509_45221} {RNA1310_16148.1} {RNA815_19582} |
|
| 18. | MligTC455_34964 | 36 | 0.74 | Mlig455_061796 | Neo: - Age: - Regeneration-enriched R4: 10.163 |
TRMU | 0.96 | - | - | - | - | - | 0.960 | Mlig455_061796 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: tRNA methyl transferase [PF03054.18, score=336.9]; CENP-S protein [PF15630.8, score=76.1]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=23.4]} {Human: ENSG00000100416, TRMU, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [Score=291, Expect=2e-93]} {Mouse: ENSMUSG00000022386, Trmu, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [Score=290, Expect=3e-93]} {Dmel: FBgn0040337, CG3021, [Score=327, Expect=7e-108]} {Celegans: WBGene00007114, mttu-1, Probable mitochondrial tRNA-specific 2-thiouridylase 1, [Score=259, Expect=3e-82]} {Smed: dd_Smed_v6_12984_0_1, dd_Smed_v6_12984_0_1, [Score=326, Expect=1e-107]} {RNA1509_13037} {RNA1310_15709.2} {RNA815_7452} |
| 19. | MligTC455_53081 | 86 | 1.8 | Mlig455_069206 | Neo: Int S/G2/M Age: - |
FANCD2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_069206 {REF} {Length: 5289} {TRANSSPLICED} {Pfam: Fanconi anaemia protein FancD2 nuclease [PF14631.8, score=216.2]} {Human: ENSG00000144554, FANCD2, FA complementation group D2, [RH, Score=131, Expect=5e-30]} {Mouse: ENSMUSG00000034023, Fancd2, Fanconi anemia, complementation group D2, [RH, Score=130, Expect=7e-30]} {Smed: dd_Smed_v6_12881_0_1, dd_Smed_v6_12881_0_1, [RH, Score=70.9, Expect=5e-12]} {RNA1509_14338} {RNA1310_1038} {RNA815_21338} |
| 20. | MligTC455_49633 | 243 | 5.07 | Mlig455_061915 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_061915 {REF} {Length: 1066} {RNA1509_13767} {RNA1310_26213} {RNA815_5574.1} | |
| 21. | MligTC455_38062 | 26 | 0.55 | Mlig455_015619 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_015619 {REF} {Length: 1624} {NoTransDecoderORF} {RNA1509_29114} {RNA1310_21909.2} {RNA815_54554} |