TomoSeq data search

Data search

Results for MligTC455_49760

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49760	537	11.20	Mlig455_039884, Mlig455_039902, Mlig455_039935	Neo: - Age: Down-Up-Down	ZDHHC3	Mlig455_039884 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.0]} {Human: ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=238, Expect=2e-76]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=243, Expect=2e-78]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=238, Expect=1e-76]} {Dmel: FBgn0034057, CG8314, [Score=232, Expect=1e-74]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=192, Expect=2e-59]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=261, Expect=4e-85]} {RNA1509_20329, RNA1509_26945} {RNA1310_6664, RNA1509_20329} {RNA1509_20329, RNA815_1015.1} Mlig455_039902 {REF} {Length: 1753} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=211, Expect=2e-66]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=205, Expect=1e-63]} {Dmel: FBgn0034057, CG8314, [Score=199, Expect=8e-62]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=168, Expect=2e-50]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=234, Expect=9e-75]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1} Mlig455_039935 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=66.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=125, Expect=6e-32]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=124, Expect=4e-31]} {Dmel: FBgn0034057, CG8314, [Score=124, Expect=1e-31]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=160, Expect=4e-44]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49760

537

11.20

Mlig455_039884, Mlig455_039902, Mlig455_039935

Neo: -

Age: Down-Up-Down

ZDHHC3

Mlig455_039884 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.0]} {Human: ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=238, Expect=2e-76]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=243, Expect=2e-78]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=238, Expect=1e-76]} {Dmel: FBgn0034057, CG8314, [Score=232, Expect=1e-74]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=192, Expect=2e-59]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=261, Expect=4e-85]} {RNA1509_20329, RNA1509_26945} {RNA1310_6664, RNA1509_20329} {RNA1509_20329, RNA815_1015.1}

Mlig455_039902 {REF} {Length: 1753} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=211, Expect=2e-66]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=205, Expect=1e-63]} {Dmel: FBgn0034057, CG8314, [Score=199, Expect=8e-62]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=168, Expect=2e-50]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=234, Expect=9e-75]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1}

Mlig455_039935 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=66.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=125, Expect=6e-32]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=124, Expect=4e-31]} {Dmel: FBgn0034057, CG8314, [Score=124, Expect=1e-31]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=160, Expect=4e-44]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1}

Cumulative graph for MligTC455_49760

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.38	3.826	0.74121	1.00000
RegionR2	0.693	3.826	0.13375	0.45402
RegionR3	-0.58	3.826	0.11706	0.59341
RegionR4	-0.162	3.826	0.71968	1.00000
RegionR5	-0.163	3.826	0.60518	0.96252
RegionR6	-0.206	3.826	0.56884	1.00000
RegionR7	0.15	3.826	0.75513	1.00000
RegionR8	0.647	3.826	0.23878	0.85504

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.77	3.826	0.23812	0.96582
RegenerationR2	-0.533	3.826	0.13916	0.56852
RegenerationR3	0.612	3.826	0.14966	0.57848
RegenerationR4	-0.17	3.826	0.69283	0.95058
RegenerationR5	0.686	3.826	0.05444	0.37440
RegenerationR6	0.627	3.826	0.13821	0.45610
RegenerationBL	0.706	3.826	0.15145	0.46493
RegenerationTP	-1.604	3.826	0.01506	0.21020

Genes with expression patterns similar to MligTC455_49760

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49760	537	11.2	Mlig455_039884, Mlig455_039902, Mlig455_039935	Neo: - Age: Down-Up-Down	ZDHHC3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039884 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.0]} {Human: ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=238, Expect=2e-76]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=243, Expect=2e-78]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=238, Expect=1e-76]} {Dmel: FBgn0034057, CG8314, [Score=232, Expect=1e-74]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=192, Expect=2e-59]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=261, Expect=4e-85]} {RNA1509_20329, RNA1509_26945} {RNA1310_6664, RNA1509_20329} {RNA1509_20329, RNA815_1015.1} Mlig455_039902 {REF} {Length: 1753} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=211, Expect=2e-66]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=205, Expect=1e-63]} {Dmel: FBgn0034057, CG8314, [Score=199, Expect=8e-62]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=168, Expect=2e-50]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=234, Expect=9e-75]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1} Mlig455_039935 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=66.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=125, Expect=6e-32]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=124, Expect=4e-31]} {Dmel: FBgn0034057, CG8314, [Score=124, Expect=1e-31]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=160, Expect=4e-44]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1}
2.	MligTC455_35978	454	9.45	Mlig455_047915	Neo: Int S/G2/M Age: - Region-enriched R4: 1.942/0.03841	ECT2	0.959	-	-	-	-	0.959	-	Mlig455_047915 {REF} {Length: 3280} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=117.9]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=236, Expect=6e-65]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=233, Expect=4e-64]} {Dmel: FBgn0003041, pbl, pebble, [Score=206, Expect=6e-57]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [RH, Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=74.3, Expect=2e-13]} {RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596} {RNA1310_4384, RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596} {RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596, RNA815_5972}
3.	MligTC455_46033	374	7.79	Mlig455_047932	Neo: Irradiation Age: - Region-enriched R5: 1.002/0.04744		0.958	-	-	-	-	0.958	-	Mlig455_047932 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=49.0]} {RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1310_12378, RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1509_21516, RNA1509_43295, RNA1509_44776, RNA815_4225.1}
4.	MligTC455_34583	920	19.17	Mlig455_051010, Mlig455_051075	Neo: Int S/G2/M Age: - Region-enriched R2: 1.717/0.02771	DHX8	0.957	-	-	-	-	-	0.957	Mlig455_051010 {REF} {Length: 5851} {TRANSSPLICED} {Pfam: Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.0]; Helicase associated domain (HA2) [PF04408.25, score=80.0]; Helicase conserved C-terminal domain [PF00271.33, score=47.4]; DEAD/DEAH box helicase [PF00270.31, score=31.8]; AAA domain [PF13401.8, score=25.3]; S1 RNA binding domain [PF00575.25, score=23.6]; AAA domain [PF13604.8, score=20.0]} {Human: ENSG00000067596, DHX8, DEAH-box helicase 8, [RH, Score=1407, Expect=0.0]} {Mouse: ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [RH, Score=1390, Expect=0.0]} {Dmel: FBgn0086895, pea, peanuts, [RH, Score=1321, Expect=0.0]} {Celegans: WBGene00003393, mog-5, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5, [RH, Score=1271, Expect=0.0]} {Smed: dd_Smed_v6_8181_0_1, dd_Smed_v6_8181_0_1, [RH, Score=1265, Expect=0.0]} {RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668} {RNA1310_6897, RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668} {RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668, RNA815_3398} Mlig455_051075 {REF} {Length: 5066} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=82.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.2]; Helicase conserved C-terminal domain [PF00271.33, score=47.5]; DEAD/DEAH box helicase [PF00270.31, score=31.2]; AAA domain [PF13401.8, score=26.2]; S1 RNA binding domain [PF00575.25, score=23.7]} {Human: ENSG00000067596, DHX8, DEAH-box helicase 8, [RH, Score=1400, Expect=0.0]} {Mouse: ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [RH, Score=1396, Expect=0.0]} {Dmel: FBgn0086895, pea, peanuts, [RH, Score=1328, Expect=0.0]} {Celegans: WBGene00003393, mog-5, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5, [RH, Score=1271, Expect=0.0]} {Smed: dd_Smed_v6_8181_0_1, dd_Smed_v6_8181_0_1, [RH, Score=1263, Expect=0.0]} {RNA1509_10277} {RNA1310_6897} {RNA815_3398}
5.	MligTC455_44353	469	9.78	Mlig455_066099, Mlig455_068672	Neo: - Age: -	ZER1	0.955	-	-	-	-	-	0.955	Mlig455_066099 {REF} {Length: 3264} {TRANSSPLICED} {Human: ENSG00000160445, ZER1, zyg-11 related cell cycle regulator, [RH, Score=147, Expect=3e-36]} {Mouse: ENSMUSG00000039686, Zer1, zyg-11 related, cell cycle regulator, [RH, Score=148, Expect=2e-36]} {Dmel: FBgn0043458, CG12084, [RH, Score=145, Expect=1e-35]} {Celegans: WBGene00020762, zer-1, Zyg eleven-related protein 1, [Score=133, Expect=9e-32]} {Smed: dd_Smed_v6_7636_0_3, dd_Smed_v6_7636_0_3, [Score=60.1, Expect=4e-09]} {RNA1509_13123} {RNA1310_3290} {RNA815_6384} Mlig455_068672 {REF} {Length: 3351} {TRANSSPLICED} {Human: ENSG00000160445, ZER1, zyg-11 related cell cycle regulator, [RH, Score=147, Expect=5e-36]} {Mouse: ENSMUSG00000039686, Zer1, zyg-11 related, cell cycle regulator, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0043458, CG12084, [RH, Score=145, Expect=1e-35]} {Celegans: WBGene00020762, zer-1, Zyg eleven-related protein 1, [Score=134, Expect=4e-32]} {Smed: dd_Smed_v6_7636_0_3, dd_Smed_v6_7636_0_3, [Score=57.4, Expect=3e-08]} {RNA1509_13123} {RNA1310_3290, RNA1509_13123} {RNA1509_13123, RNA815_6384}
6.	MligTC455_50727	2737	57.01	Mlig455_003804, Mlig455_033285	Neo: Int S/G2/M Age: logFC(26M/2M)=0.156	IARS	0.953	-	-	-	-	-	0.953	Mlig455_003804 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=783.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=79.8]; Domain of unknown function (DUF5915) [PF19302.1, score=69.4]; tRNA synthetases class I (M) [PF09334.13, score=49.6]} {Human: ENSG00000196305, IARS, isoleucyl-tRNA synthetase, [RH, Score=1345, Expect=0.0]} {Mouse: ENSMUSG00000037851, Iars, isoleucine-tRNA synthetase, [RH, Score=1339, Expect=0.0]} {Dmel: FBgn0027086, IleRS, Isoleucyl-tRNA synthetase, [RH, Score=1243, Expect=0.0]} {Celegans: WBGene00002152, iars-1, Isoleucine--tRNA ligase, cytoplasmic, [RH, Score=1224, Expect=0.0]} {Smed: dd_Smed_v6_2156_0_1, dd_Smed_v6_2156_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_1946} {RNA1310_2190.1} {RNA815_648} Mlig455_033285 {REF} {Length: 4704} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=783.7]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=79.6]; Domain of unknown function (DUF5915) [PF19302.1, score=68.2]; tRNA synthetases class I (M) [PF09334.13, score=49.1]; zinc-finger C2H2-type [PF16622.7, score=18.7]} {Human: ENSG00000196305, IARS, isoleucyl-tRNA synthetase, [RH, Score=1347, Expect=0.0]} {Mouse: ENSMUSG00000037851, Iars, isoleucine-tRNA synthetase, [RH, Score=1337, Expect=0.0]} {Dmel: FBgn0027086, IleRS, Isoleucyl-tRNA synthetase, [RH, Score=1248, Expect=0.0]} {Celegans: WBGene00002152, iars-1, Isoleucine--tRNA ligase, cytoplasmic, [RH, Score=1222, Expect=0.0]} {Smed: dd_Smed_v6_2156_0_1, dd_Smed_v6_2156_0_1, [RH, Score=1236, Expect=0.0]} {RNA1509_1946, RNA1509_57050} {RNA1310_2190.2, RNA1509_57050} {RNA1509_57050, RNA815_648}