TomoSeq data search

Data search

Results for MligTC455_49963

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49963

193

4.03

Mlig455_023960

Neo: -

Age: -

AGRN

Mlig455_023960 {REF} {Length: 1768} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=144.2]; Kazal-type serine protease inhibitor domain [PF00050.23, score=74.2]} {Human: ENSG00000188157, AGRN, agrin, [Score=111, Expect=4e-25]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=129, Expect=2e-31]} {Dmel: FBgn0052354, CG32354, [Score=60.1, Expect=3e-09]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=145, Expect=7e-37]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=170, Expect=2e-45]} {RNA1509_47154} {RNA1310_39829.2} {RNA815_11942}

Cumulative graph for MligTC455_49963

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.483	2.455	0.78539	1.00000
RegionR2	2.272	2.455	0.00413	0.05694
RegionR3	-0.354	2.455	0.64667	1.00000
RegionR4	-2.913	2.455	0.00104	0.01069
RegionR5	-1.678	2.455	0.02593	0.11673
RegionR6	1.259	2.455	0.05315	0.43158
RegionR7	2.102	2.455	0.00280	0.07334
RegionR8	-0.204	2.455	0.88272	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.249	2.455	0.35209	1.00000
RegenerationR2	-0.856	2.455	0.21782	0.66536
RegenerationR3	0.55	2.455	0.52722	0.87048
RegenerationR4	0.855	2.455	0.37053	0.79437
RegenerationR5	0.348	2.455	0.71078	0.95558
RegenerationR6	-1.866	2.455	0.02959	0.21471
RegenerationBL	-0.486	2.455	0.62870	0.97004
RegenerationTP	-0.396	2.455	0.70504	1.00000

Genes with expression patterns similar to MligTC455_49963

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49963	193	4.03	Mlig455_023960	Neo: - Age: -	AGRN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023960 {REF} {Length: 1768} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=144.2]; Kazal-type serine protease inhibitor domain [PF00050.23, score=74.2]} {Human: ENSG00000188157, AGRN, agrin, [Score=111, Expect=4e-25]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=129, Expect=2e-31]} {Dmel: FBgn0052354, CG32354, [Score=60.1, Expect=3e-09]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=145, Expect=7e-37]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=170, Expect=2e-45]} {RNA1509_47154} {RNA1310_39829.2} {RNA815_11942}
2.	MligTC455_13612	95	1.98	Mlig455_060964	Neo: - Age: -		1.726	-	-	0.953	-	0.773	-	Mlig455_060964 {REF} {Length: 2501} {Pfam: NPH3 family [PF03000.16, score=44.6]; BTB/POZ domain [PF00651.33, score=25.4]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [Score=160, Expect=4e-42]} {RNA1310_11638} {RNA815_12936}
3.	MligTC455_15685	62	1.3	Mlig455_011329	Neo: - Age: -	NOTCH4	0.961	-	-	-	-	-	0.961	Mlig455_011329 {REF} {Length: 1536} {Pfam: EGF-like domain [PF00008.29, score=24.1]} {Human: ENSG00000232339, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000206312, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000223355, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000234876, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000204301, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000235396, NOTCH4, notch 4, [Score=52.4, Expect=2e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=53.5, Expect=5e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=52.0, Expect=2e-07]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}
4.	MligTC455_43117	761	15.85	Mlig455_020048	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.232 Region-enriched R4: 2.195/0.00074	SYT2	0.961	-	-	-	-	0.961	-	Mlig455_020048 {REF} {Length: 2219} {Pfam: C2 domain [PF00168.32, score=73.7]} {Human: ENSG00000143858, SYT2, synaptotagmin 2, [Score=66.2, Expect=4e-11]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=53.5, Expect=2e-07]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=70.9, Expect=6e-13]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=64.7, Expect=4e-11]} {RNA1509_15684} {RNA1310_6450.1} {RNA815_4385}
5.	MligTC455_39188	230	4.8	Mlig455_062453	Neo: - Age: Up-Down-Down	FAR1	0.953	-	-	-	0.953	-	-	Mlig455_062453 {REF} {Length: 2801} {Pfam: Male sterility protein [PF07993.14, score=244.0]; Male sterility protein [PF03015.21, score=92.8]} {Human: ENSG00000197601, FAR1, fatty acyl-CoA reductase 1, [RH, Score=457, Expect=5e-156]} {Mouse: ENSMUSG00000030759, Far1, fatty acyl CoA reductase 1, [RH, Score=459, Expect=5e-157]} {Dmel: FBgn0034145, CG5065, [RH, Score=437, Expect=3e-147]} {Celegans: WBGene00022200, fard-1, Fatty acyl-CoA reductase, [RH, Score=412, Expect=1e-138]} {Smed: dd_Smed_v6_7206_0_1, dd_Smed_v6_7206_0_1, [RH, Score=388, Expect=3e-129]} {RNA1509_20052} {RNA1310_3186.1} {RNA815_896.1}
6.	MligTC455_18535	29	0.61	Mlig455_035051	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_035051 {REF} {Length: 1809} {RNA1310_97662}
7.	MligTC455_19712	82	1.7	Mlig455_000384	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_000384 {REF} {Length: 1367} {NoTransDecoderORF} {RNA1310_88029.2} {RNA815_48482}
8.	MligTC455_35161	35	0.73	Mlig455_012119	Neo: - Age: Down-Up-Down		0.951	-	-	-	-	-	0.951	Mlig455_012119 {REF} {Length: 3213} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.1]} {Smed: dd_Smed_v6_13661_0_1, dd_Smed_v6_13661_0_1, [Score=81.3, Expect=2e-17]} {RNA1509_53704} {RNA1310_36988} {RNA815_11369}
9.	MligTC455_40613	41	0.86	Mlig455_026807	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_026807 {REF} {Length: 1929} {RNA1509_37399} {RNA1310_18527, RNA1509_37399} {RNA1509_37399, RNA815_9560}
10.	MligTC455_05789	60	1.26	Mlig455_035341	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_035341 {REF} {Length: 1308} {RNA1509_45080} {RNA1310_17043} {RNA815_36052}
11.	MligTC455_46899	560	11.68	Mlig455_000452	Neo: - Age: Up-Down-Down	CASKIN2	0.95	-	-	-	-	0.950	-	Mlig455_000452 {REF} {Length: 5575} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=119.9]; Ankyrin repeats (many copies) [PF13637.8, score=105.4]; Ankyrin repeats (many copies) [PF13857.8, score=95.0]; Ankyrin repeat [PF13606.8, score=85.3]; Ankyrin repeat [PF00023.32, score=75.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=62.7]; SAM domain (Sterile alpha motif) [PF07647.19, score=39.0]} {Human: ENSG00000177303, CASKIN2, CASK interacting protein 2, [RH, Score=320, Expect=2e-91]} {Mouse: ENSMUSG00000034471, Caskin2, CASK-interacting protein 2, [RH, Score=322, Expect=2e-92]} {Dmel: FBgn0039075, CG4393, [RH, Score=143, Expect=3e-34]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=148, Expect=3e-36]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [RH, Score=147, Expect=3e-36]} {RNA1509_13287, RNA1509_27977, RNA1509_29255} {RNA1310_2414.1, RNA1509_13287, RNA1509_27977, RNA1509_29255} {RNA1509_13287, RNA1509_27977, RNA1509_29255, RNA815_10698}

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