TomoSeq data search

Data search

Results for MligTC455_49996

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49996

322

6.71

Mlig455_043033

Neo: -

Age: -

SFXN1

Mlig455_043033 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Sideroflexins [PF03820.19, score=459.6]} {Human: ENSG00000164466, SFXN1, sideroflexin 1, [RH, Score=400, Expect=2e-140]; ENSG00000107819, SFXN3, sideroflexin 3, [RH, Score=396, Expect=1e-138]} {Mouse: ENSMUSG00000021474, Sfxn1, sideroflexin 1, [RH, Score=397, Expect=4e-139]; ENSMUSG00000025212, Sfxn3, sideroflexin 3, [RH, Score=396, Expect=6e-139]} {Dmel: FBgn0037239, Sfxn1-3, Sideroflexin 1/3, [RH, Score=383, Expect=6e-134]} {Celegans: WBGene00009513, sfxn-1.2, Sideroflexin, [RH, Score=320, Expect=8e-109]} {Smed: dd_Smed_v6_12292_0_1, dd_Smed_v6_12292_0_1, [RH, Score=426, Expect=6e-151]} {RNA1509_45013, RNA1509_8393} {RNA1310_25049, RNA1509_45013, RNA1509_8393} {RNA1509_45013, RNA1509_8393, RNA815_11152.1}

Cumulative graph for MligTC455_49996

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.488	3.286	0.77673	1.00000
RegionR2	-0.581	3.286	0.44902	0.83718
RegionR3	1.019	3.286	0.06724	0.45845
RegionR4	0.967	3.286	0.19669	0.47524
RegionR5	0.142	3.286	0.78597	1.00000
RegionR6	-0.121	3.286	0.84506	1.00000
RegionR7	0.687	3.286	0.31120	0.94509
RegionR8	-2.601	3.286	0.03404	0.36270

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.321	3.286	0.33533	1.00000
RegenerationR2	0.17	3.286	0.78657	0.98536
RegenerationR3	-0.224	3.286	0.72408	0.95589
RegenerationR4	0.022	3.286	0.97980	1.00000
RegenerationR5	0.279	3.286	0.65071	0.93263
RegenerationR6	1.28	3.286	0.04614	0.26812
RegenerationBL	-0.64	3.286	0.58523	0.93637
RegenerationTP	-0.469	3.286	0.69127	1.00000

Genes with expression patterns similar to MligTC455_49996

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49996	322	6.71	Mlig455_043033	Neo: - Age: -	SFXN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043033 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Sideroflexins [PF03820.19, score=459.6]} {Human: ENSG00000164466, SFXN1, sideroflexin 1, [RH, Score=400, Expect=2e-140]; ENSG00000107819, SFXN3, sideroflexin 3, [RH, Score=396, Expect=1e-138]} {Mouse: ENSMUSG00000021474, Sfxn1, sideroflexin 1, [RH, Score=397, Expect=4e-139]; ENSMUSG00000025212, Sfxn3, sideroflexin 3, [RH, Score=396, Expect=6e-139]} {Dmel: FBgn0037239, Sfxn1-3, Sideroflexin 1/3, [RH, Score=383, Expect=6e-134]} {Celegans: WBGene00009513, sfxn-1.2, Sideroflexin, [RH, Score=320, Expect=8e-109]} {Smed: dd_Smed_v6_12292_0_1, dd_Smed_v6_12292_0_1, [RH, Score=426, Expect=6e-151]} {RNA1509_45013, RNA1509_8393} {RNA1310_25049, RNA1509_45013, RNA1509_8393} {RNA1509_45013, RNA1509_8393, RNA815_11152.1}
2.	MligTC455_29822	222	4.63	Mlig455_061799	Neo: - Age: -	PLAGL2	1.854	0.904	-	-	-	0.950	-	Mlig455_061799 {REF} {Length: 6222} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=24.4]; Zinc finger, C2H2 type [PF00096.28, score=23.9]} {Human: ENSG00000126003, PLAGL2, PLAG1 like zinc finger 2, [Score=61.6, Expect=5e-09]; ENSG00000198816, ZNF358, zinc finger protein 358, [Score=61.2, Expect=7e-09]} {Mouse: ENSMUSG00000070495, Ctcfl, CCCTC-binding factor (zinc finger protein)-like, [Score=63.5, Expect=9e-10]; ENSMUSG00000051413, Plagl2, pleiomorphic adenoma gene-like 2, [Score=60.8, Expect=5e-09]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=60.5, Expect=8e-09]} {Celegans: WBGene00013734, Y111B2A.10, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_11201_0_1, dd_Smed_v6_11201_0_1, [Score=68.6, Expect=1e-11]} {RNA1509_11247, RNA1509_18625, RNA1509_24136} {RNA1310_3056.1, RNA1509_11247, RNA1509_18625, RNA1509_24136} {RNA1509_11247, RNA1509_18625, RNA1509_24136, RNA815_16992}
3.	MligTC455_29649	274	5.71	Mlig455_069881	Neo: - Age: -	SLC25A27	1.705	0.961	0.744	-	-	-	-	Mlig455_069881 {REF} {Length: 2690} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=199.1]} {Human: ENSG00000153291, SLC25A27, solute carrier family 25 member 27, [RH, Score=320, Expect=1e-108]} {Mouse: ENSMUSG00000023912, Slc25a27, solute carrier family 25, member 27, [RH, Score=320, Expect=6e-109]} {Dmel: FBgn0030872, Ucp4A, [RH, Score=320, Expect=5e-109]} {Celegans: WBGene00006729, ucp-4, UnCoupling Protein (Mitochondrial substrate carrier), [RH, Score=289, Expect=4e-97]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [Score=149, Expect=5e-43]} {RNA1509_37248} {RNA1310_7285.1} {RNA815_10639}
4.	MligTC455_52190	488	10.17	Mlig455_065357	Neo: Int S/G2/M Age: -	SMNDC1	0.963	-	-	-	-	0.963	-	Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1}
5.	MligTC455_16386	708	14.75	Mlig455_068604	Neo: - Age: -	HTRA1	0.962	0.962	-	-	-	-	-	Mlig455_068604 {REF} {Length: 1704} {TRANSSPLICED} {Pfam: Trypsin-like peptidase domain [PF13365.8, score=106.9]; Trypsin [PF00089.28, score=43.7]; Peptidase S46 [PF10459.11, score=18.1]} {Human: ENSG00000166033, HTRA1, HtrA serine peptidase 1, [Score=184, Expect=1e-54]; ENSG00000115317, HTRA2, HtrA serine peptidase 2, [Score=177, Expect=6e-51]} {Mouse: ENSMUSG00000006205, Htra1, HtrA serine peptidase 1, [Score=185, Expect=4e-54]; ENSMUSG00000037406, Htra4, HtrA serine peptidase 4, [Score=177, Expect=7e-51]} {Dmel: FBgn0038233, HtrA2, HTRA2-related serine protease, [Score=198, Expect=1e-59]} {Smed: dd_Smed_v6_12372_0_1, dd_Smed_v6_12372_0_1, [Score=184, Expect=5e-55]} {RNA1509_47735} {RNA1310_17624, RNA1509_47735} {RNA1509_47735, RNA815_9669}
6.	MligTC455_43990	349	7.27	Mlig455_062215	Neo: Irradiation Age: Up-Down-Down		0.961	-	-	-	-	0.961	-	Mlig455_062215 {REF} {Length: 733} {NoTransDecoderORF} {RNA1509_42323, RNA1509_47967} {RNA1310_60174, RNA1509_42323, RNA1509_47967} {RNA1509_42323, RNA1509_47967, RNA815_30810}
7.	MligTC455_46955	246	5.13	Mlig455_036158	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_036158 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=211.4]; Sulfotransferase family [PF13469.8, score=19.7]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [RH, Score=169, Expect=8e-52]} {RNA1509_33205, RNA1509_33331, RNA1509_43128} {RNA1310_22290.1, RNA1509_33205, RNA1509_33331, RNA1509_43128} {RNA1509_33205, RNA1509_33331, RNA1509_43128, RNA815_9571}
8.	MligTC455_47834	3094	64.46	Mlig455_006845, Mlig455_023051, Mlig455_025596, Mlig455_032281, Mlig455_035998, Mlig455_036096, Mlig455_038954, Mlig455_042912, Mlig455_052897, Mlig455_055147, Mlig455_057212, Mlig455_059046, Mlig455_063994	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_006845 {REF} {Length: 2650} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_023051 {REF} {Length: 1046} {TRANSSPLICED} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_025596 {REF} {Length: 1046} {TRANSSPLICED} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_032281 {REF} {Length: 718} {Pfam: Sporozoite P67 surface antigen [PF05642.13, score=18.2]} {RNA1509_39164} {RNA1310_42584} {RNA815_16712} Mlig455_035998 {REF} {Length: 900} {TRANSSPLICED} {RNA1509_12633} {RNA1310_33797} {RNA815_16712} Mlig455_036096 {REF} {Length: 903} {TRANSSPLICED} {RNA1509_12633} {RNA1310_33797} {RNA815_16712} Mlig455_038954 {REF} {Length: 2078} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_042912 {REF} {Length: 1042} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12633} {RNA1310_33797} {RNA815_16712} Mlig455_052897 {REF} {Length: 1046} {TRANSSPLICED} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_055147 {REF} {Length: 1031} {TRANSSPLICED} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_057212 {REF} {Length: 1046} {TRANSSPLICED} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_059046 {REF} {Length: 1036} {TRANSSPLICED} {RNA1509_12633, RNA1509_39164} {RNA1310_33797, RNA1509_12633, RNA1509_39164} {RNA1509_12633, RNA1509_39164, RNA815_16712} Mlig455_063994 {REF} {Length: 1032} {RNA1509_12633} {RNA1310_33797} {RNA815_16712}
9.	MligTC455_22247	542	11.29	Mlig455_006232, Mlig455_006293	Neo: - Age: -	SUDS3	0.957	0.957	-	-	-	-	-	Mlig455_006232 {REF} {Length: 3264} {TRANSSPLICED} {Pfam: Sds3-like [PF08598.13, score=47.7]} {Human: ENSG00000111707, SUDS3, SDS3 homolog, SIN3A corepressor complex component, [RH, Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000066900, Suds3, suppressor of defective silencing 3 homolog (S. cerevisiae), [RH, Score=65.9, Expect=2e-11]} {RNA1509_23875} {RNA1310_17180} {RNA815_12671} Mlig455_006293 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: Sds3-like [PF08598.13, score=47.7]} {Human: ENSG00000111707, SUDS3, SDS3 homolog, SIN3A corepressor complex component, [RH, Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000066900, Suds3, suppressor of defective silencing 3 homolog (S. cerevisiae), [RH, Score=65.9, Expect=2e-11]} {RNA1509_23875} {RNA1310_17180} {RNA815_12671}
10.	MligTC455_24417	116	2.42	Mlig455_069130	Neo: - Age: logFC(26M/2M)=-0.759		0.957	-	-	-	-	0.957	-	Mlig455_069130 {REF} {Length: 2601} {RNA1310_33116} {RNA815_41020}
11.	MligTC455_27058	411	8.56	Mlig455_070269	Neo: - Age: -		0.956	0.956	-	-	-	-	-	Mlig455_070269 {REF} {Length: 3206} {TRANSSPLICED} {RNA1509_42366} {RNA1310_8891.1} {RNA815_1626.3}
12.	MligTC455_50452	856	17.83	Mlig455_061011	Neo: - Age: - Region-enriched R4: 1.811/0.02245 Region-enriched R5: 1.589/0.02679	GPD2	0.956	0.956	-	-	-	-	-	Mlig455_061011 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=183.6]; C-terminal domain of alpha-glycerophosphate oxidase [PF16901.7, score=132.8]; EF-hand domain pair [PF13499.8, score=50.9]; FAD binding domain [PF00890.26, score=39.3]; EF hand [PF00036.34, score=35.9]; EF-hand domain [PF13405.8, score=32.7]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=28.6]; FAD dependent oxidoreductase [PF12831.9, score=25.8]; FAD binding domain [PF01494.21, score=21.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.0]; Glucose inhibited division protein A [PF01134.24, score=19.8]} {Human: ENSG00000115159, GPD2, glycerol-3-phosphate dehydrogenase 2, [RH, Score=863, Expect=0.0]} {Mouse: ENSMUSG00000026827, Gpd2, glycerol phosphate dehydrogenase 2, mitochondrial, [RH, Score=847, Expect=0.0]} {Dmel: FBgn0022160, Gpo-1, Glycerophosphate oxidase-1, [RH, Score=822, Expect=0.0]} {Celegans: WBGene00012031, T25G3.4, Probable glycerol-3-phosphate dehydrogenase, mitochondrial, [RH, Score=776, Expect=0.0]} {Smed: dd_Smed_v6_4928_0_1, dd_Smed_v6_4928_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_31434, RNA1509_3796} {RNA1310_6250.1, RNA1509_31434, RNA1509_3796} {RNA1509_31434, RNA1509_3796, RNA815_1850.1}
13.	MligTC455_21796	214	4.46	Mlig455_000306, Mlig455_012297, Mlig455_012302, Mlig455_054373	Neo: - Age: logFC(26M/2M)=0.881		0.955	-	-	-	-	0.955	-	Mlig455_000306 {REF} {Length: 2331} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_012297 {REF} {Length: 1979} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_012302 {REF} {Length: 2233} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_054373 {REF} {Length: 2112} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590}
14.	MligTC455_23237	505	10.52	Mlig455_007444	Neo: - Age: -	TMEM258	0.955	0.955	-	-	-	-	-	Mlig455_007444 {REF} {Length: 4417} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=81.6]} {Human: ENSG00000134825, TMEM258, transmembrane protein 258, [RH, Score=131, Expect=8e-36]} {Mouse: ENSMUSG00000036372, Tmem258, transmembrane protein 258, [RH, Score=131, Expect=6e-36]} {Dmel: FBgn0036667, CG9669, [RH, Score=97.1, Expect=4e-24]} {Celegans: WBGene00021960, Y57E12AM.1, Transmembrane protein 258 homolog, [Score=72.8, Expect=9e-16]} {Smed: dd_Smed_v6_1016_0_1, dd_Smed_v6_1016_0_1, [RH, Score=134, Expect=2e-37]} {RNA1509_16085, RNA1509_43363} {RNA1310_12186, RNA1509_16085, RNA1509_43363} {RNA1509_16085, RNA1509_43363, RNA815_10743}
15.	MligTC455_50262	320	6.67	Mlig455_019038	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.470	TARBP2	0.953	0.953	-	-	-	-	-	Mlig455_019038 {REF} {Length: 1661} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=62.0]; Staufen C-terminal domain [PF16482.7, score=26.1]} {Human: ENSG00000139546, TARBP2, TARBP2, RISC loading complex RNA binding subunit, [RH, Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000023051, Tarbp2, TARBP2, RISC loading complex RNA binding subunit, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0032515, loqs, loquacious, [RH, Score=121, Expect=2e-30]} {Smed: dd_Smed_v6_9213_0_1, dd_Smed_v6_9213_0_1, [RH, Score=157, Expect=1e-44]} {RNA1509_37226} {RNA1310_1441.1} {RNA815_48096}
16.	MligTC455_31547	898	18.7	Mlig455_069777, Mlig455_069778	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_069777 {REF} {Length: 5032} {RNA1509_52318} {RNA1310_12487, RNA1509_52318} {RNA1509_52318, RNA815_9587} Mlig455_069778 {REF} {Length: 3336} {Pfam: FlgD Tudor-like domain [PF13861.8, score=19.1]} {Mouse: ENSMUSG00000021057, Akap5, A kinase (PRKA) anchor protein 5, [Score=87.4, Expect=9e-18]} {RNA1509_13587} {RNA1310_20381.1} {RNA815_15264}
17.	MligTC455_44916	688	14.33	Mlig455_025259	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.436	GMPPA	0.951	0.951	-	-	-	-	-	Mlig455_025259 {REF} {Length: 1859} {TRANSSPLICED} {Pfam: Nucleotidyl transferase [PF00483.25, score=97.0]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=29.6]; MobA-like NTP transferase domain [PF12804.9, score=21.3]} {Human: ENSG00000144591, GMPPA, GDP-mannose pyrophosphorylase A, [RH, Score=458, Expect=1e-159]} {Mouse: ENSMUSG00000033021, Gmppa, GDP-mannose pyrophosphorylase A, [RH, Score=461, Expect=4e-161]} {Dmel: FBgn0034035, CG8207, [RH, Score=450, Expect=1e-156]} {Celegans: WBGene00021628, Y47D9A.1, [RH, Score=398, Expect=9e-137]} {Smed: dd_Smed_v6_4150_0_1, dd_Smed_v6_4150_0_1, [RH, Score=496, Expect=6e-175]} {RNA1509_37379} {RNA1310_15544, RNA1509_37379} {RNA1509_37379, RNA815_10312.2}
18.	MligTC455_48926	253	5.27	Mlig455_021971	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.527	GSTZ1	0.951	-	-	-	-	0.951	-	Mlig455_021971 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Glutathione S-transferase, N-terminal domain [PF13417.8, score=68.3]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=64.0]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=54.8]} {Human: ENSG00000100577, GSTZ1, glutathione S-transferase zeta 1, [RH, Score=231, Expect=7e-77]} {Mouse: ENSMUSG00000021033, Gstz1, glutathione transferase zeta 1 (maleylacetoacetate isomerase), [RH, Score=238, Expect=7e-80]} {Dmel: FBgn0037697, GstZ2, Glutathione S transferase Z2, [RH, Score=230, Expect=1e-76]} {Celegans: WBGene00001790, gst-42, Probable maleylacetoacetate isomerase, [RH, Score=189, Expect=1e-60]} {Smed: dd_Smed_v6_1703_0_1, dd_Smed_v6_1703_0_1, [RH, Score=226, Expect=3e-75]} {RNA1509_16440} {RNA1310_16659.1} {RNA815_19786}
19.	MligTC455_49019	224	4.66	Mlig455_056901	Neo: - Age: Up-Down-Down		0.951	0.951	-	-	-	-	-	Mlig455_056901 {REF} {Length: 1656} {RNA1509_49330, RNA1509_50020} {RNA1310_42965, RNA1509_49330} {RNA1509_49330, RNA815_21375.1}

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