TomoSeq data search

Data search

Results for MligTC455_50041

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50041	333	6.94	Mlig455_025236, Mlig455_025628	Neo: Irradiation Age: Up-Down-Down	PAAF1	Mlig455_025236 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=64.3]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=68.9, Expect=3e-12]; ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=68.2, Expect=8e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0011569, can, cannonball, [Score=65.5, Expect=5e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=72.8, Expect=7e-14]} {RNA1509_39072} {RNA1310_14639} {RNA815_33474} Mlig455_025628 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=68.1]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=179, Expect=2e-51]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=69.7, Expect=2e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.6, Expect=2e-11]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=73.2, Expect=6e-14]} {RNA1509_39072, RNA1509_41433} {RNA1310_14639, RNA1509_41433} {RNA1509_41433, RNA815_33474}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50041

333

6.94

Mlig455_025236, Mlig455_025628

Neo: Irradiation

Age: Up-Down-Down

PAAF1

Mlig455_025236 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=64.3]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=68.9, Expect=3e-12]; ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=68.2, Expect=8e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0011569, can, cannonball, [Score=65.5, Expect=5e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=72.8, Expect=7e-14]} {RNA1509_39072} {RNA1310_14639} {RNA815_33474}

Mlig455_025628 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=68.1]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=179, Expect=2e-51]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=69.7, Expect=2e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.6, Expect=2e-11]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=73.2, Expect=6e-14]} {RNA1509_39072, RNA1509_41433} {RNA1310_14639, RNA1509_41433} {RNA1509_41433, RNA815_33474}

Cumulative graph for MligTC455_50041

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.774	3.386	0.52246	1.00000
RegionR2	-0.217	3.386	0.73447	1.00000
RegionR3	-0.298	3.386	0.55418	1.00000
RegionR4	1.133	3.386	0.05736	0.21150
RegionR5	0.242	3.386	0.57577	0.93414
RegionR6	0.266	3.386	0.59114	1.00000
RegionR7	-0.049	3.386	0.93765	1.00000
RegionR8	-1.851	3.386	0.05614	0.46266

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.644	3.386	0.25590	0.96756
RegenerationR2	-0.418	3.386	0.48156	0.86406
RegenerationR3	-0.05	3.386	0.93415	1.00000
RegenerationR4	-0.956	3.386	0.11166	0.51286
RegenerationR5	0.001	3.386	0.98849	1.00000
RegenerationR6	-1.453	3.386	0.03783	0.24273
RegenerationBL	-0.686	3.386	0.52520	0.88585
RegenerationTP	1.209	3.386	0.15824	0.58609

Genes with expression patterns similar to MligTC455_50041

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50041	333	6.94	Mlig455_025236, Mlig455_025628	Neo: Irradiation Age: Up-Down-Down	PAAF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025236 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=64.3]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=68.9, Expect=3e-12]; ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=68.2, Expect=8e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0011569, can, cannonball, [Score=65.5, Expect=5e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=72.8, Expect=7e-14]} {RNA1509_39072} {RNA1310_14639} {RNA815_33474} Mlig455_025628 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=68.1]} {Human: ENSG00000175575, PAAF1, proteasomal ATPase associated factor 1, [RH, Score=179, Expect=2e-51]} {Mouse: ENSMUSG00000020745, Pafah1b1, platelet-activating factor acetylhydrolase, isoform 1b, subunit 1, [Score=69.7, Expect=2e-12]; ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=66.6, Expect=2e-11]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00021467, Y39G10AR.9, [RH, Score=117, Expect=8e-29]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=73.2, Expect=6e-14]} {RNA1509_39072, RNA1509_41433} {RNA1310_14639, RNA1509_41433} {RNA1509_41433, RNA815_33474}
2.	MligTC455_41189	43	0.9	Mlig455_052827	Neo: - Age: Up-Down-Down Region-enriched R5: 3.419/0.00342		0.973	-	-	-	-	-	0.973	Mlig455_052827 {REF} {Length: 611} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14567} {RNA1310_61791.1} {RNA815_27084.2}
3.	MligTC455_21706	29	0.6	Mlig455_015105	Neo: - Age: -	NLK	0.958	-	-	-	-	-	0.958	Mlig455_015105 {REF} {Length: 3658} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=55.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=44.2]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=59.7, Expect=3e-09]; ENSG00000128052, KDR, kinase insert domain receptor, [Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=59.7, Expect=2e-09]; ENSMUSG00000062960, Kdr, kinase insert domain protein receptor, [Score=57.4, Expect=1e-08]} {Dmel: FBgn0046689, Takl1, Tak1-like 1, [Score=75.9, Expect=6e-15]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=78.6, Expect=7e-16]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [Score=63.5, Expect=4e-11]} {RNA1509_8788} {RNA1310_12877} {RNA815_8209}
4.	MligTC455_40699	181	3.77	Mlig455_045306	Neo: - Age: -	CEP131	0.958	-	-	-	-	-	0.958	Mlig455_045306 {REF} {Length: 4371} {TRANSSPLICED} {Human: ENSG00000141577, CEP131, centrosomal protein 131, [RH, Score=468, Expect=3e-146]} {Mouse: ENSMUSG00000039781, Cep131, centrosomal protein 131, [RH, Score=456, Expect=5e-142]} {Dmel: FBgn0033447, dila, dilatory, [Score=142, Expect=7e-34]} {Smed: dd_Smed_v6_13976_0_1, dd_Smed_v6_13976_0_1, [RH, Score=486, Expect=4e-153]} {RNA1509_51005, RNA1509_7325} {RNA1310_1840, RNA1509_51005} {RNA1509_51005, RNA815_1783}
5.	MligTC455_36179	838	17.46	Mlig455_012503	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.233	PLB1	0.951	-	-	-	-	0.951	-	Mlig455_012503 {REF} {Length: 2217} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=76.8]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=39.4]} {Human: ENSG00000163803, PLB1, phospholipase B1, [RH, Score=294, Expect=2e-88]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [RH, Score=309, Expect=8e-94]} {Dmel: FBgn0036939, CG7365, [Score=239, Expect=1e-74]} {Celegans: WBGene00022256, Y73B6BL.37, [RH, Score=245, Expect=1e-77]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [Score=232, Expect=3e-72]} {RNA1509_30374, RNA1509_35882, RNA1509_40981} {RNA1310_16463, RNA1509_30374, RNA1509_35882, RNA1509_40981} {RNA1509_30374, RNA1509_35882, RNA1509_40981, RNA815_8760}