Data search
Results for MligTC455_50062
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50062 | 275 | 5.73 | Mlig455_041829 | Neo: - Age: - |
DPP8 | Mlig455_041829 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=157.9]; Dipeptidyl peptidase IV (DPP IV) N-terminal region [PF00930.23, score=144.2]} {Human: ENSG00000074603, DPP8, dipeptidyl peptidase 8, [RH, Score=405, Expect=3e-127]} {Mouse: ENSMUSG00000032393, Dpp8, dipeptidylpeptidase 8, [RH, Score=409, Expect=2e-128]} {Dmel: FBgn0039240, CG3744, [RH, Score=374, Expect=2e-113]} {Celegans: WBGene00001056, dpf-3, Dipeptidyl Peptidase Four (IV) family, [Score=257, Expect=1e-72]} {Smed: dd_Smed_v6_8398_0_1, dd_Smed_v6_8398_0_1, [RH, Score=292, Expect=5e-86]} {RNA1509_29851, RNA1509_56960} {RNA1310_4366, RNA1509_29851, RNA1509_56960} {RNA1509_29851, RNA1509_56960, RNA815_1863} |
Cumulative graph for MligTC455_50062
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.722 | 3.139 | 0.18390 | 0.81363 | |
| RegionR2 | 0.641 | 3.139 | 0.53602 | 0.90592 | |
| RegionR3 | 1.148 | 3.139 | 0.16211 | 0.68157 | |
| RegionR4 | 1.052 | 3.139 | 0.25103 | 0.55054 | |
| RegionR5 | 1.702 | 3.139 | 0.00854 | 0.05151 | |
| RegionR6 | 1.088 | 3.139 | 0.20282 | 0.77608 | |
| RegionR7 | -0.485 | 3.139 | 0.95550 | 1.00000 | |
| RegionR8 | 0.577 | 3.139 | 0.64393 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.159 | 3.139 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.485 | 3.139 | 0.39376 | 0.81083 | |
| RegenerationR3 | 0.161 | 3.139 | 0.77596 | 0.97380 | |
| RegenerationR4 | -0.061 | 3.139 | 0.91181 | 1.00000 | |
| RegenerationR5 | 0.174 | 3.139 | 0.72185 | 0.96019 | |
| RegenerationR6 | 0.782 | 3.139 | 0.15177 | 0.47734 | |
| RegenerationBL | 1.443 | 3.139 | 0.04022 | 0.22763 | |
| RegenerationTP | 0.066 | 3.139 | 0.94687 | 1.00000 |
Genes with expression patterns similar to MligTC455_50062
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50062 | 275 | 5.73 | Mlig455_041829 | Neo: - Age: - |
DPP8 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041829 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=157.9]; Dipeptidyl peptidase IV (DPP IV) N-terminal region [PF00930.23, score=144.2]} {Human: ENSG00000074603, DPP8, dipeptidyl peptidase 8, [RH, Score=405, Expect=3e-127]} {Mouse: ENSMUSG00000032393, Dpp8, dipeptidylpeptidase 8, [RH, Score=409, Expect=2e-128]} {Dmel: FBgn0039240, CG3744, [RH, Score=374, Expect=2e-113]} {Celegans: WBGene00001056, dpf-3, Dipeptidyl Peptidase Four (IV) family, [Score=257, Expect=1e-72]} {Smed: dd_Smed_v6_8398_0_1, dd_Smed_v6_8398_0_1, [RH, Score=292, Expect=5e-86]} {RNA1509_29851, RNA1509_56960} {RNA1310_4366, RNA1509_29851, RNA1509_56960} {RNA1509_29851, RNA1509_56960, RNA815_1863} |
| 2. | MligTC455_32456 | 153 | 3.19 | Mlig455_034353 | Neo: - Age: - |
ELAVL3 | 0.977 | 0.977 | - | - | - | - | - | Mlig455_034353 {REF} {Length: 5138} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=279.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.7]; Occluded RNA-recognition motif [PF16842.7, score=27.3]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=23.3]} {Human: ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=191, Expect=7e-54]; ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=191, Expect=9e-54]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=188, Expect=9e-53]; ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=185, Expect=3e-52]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=192, Expect=3e-54]; ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=191, Expect=7e-54]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=188, Expect=7e-53]; ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=187, Expect=3e-53]} {Dmel: FBgn0086675, fne, found in neurons, [Score=189, Expect=9e-54]} {Celegans: WBGene00001368, exc-7, [Score=120, Expect=1e-28]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [Score=112, Expect=2e-26]} {RNA1509_13713} {RNA1310_8489, RNA1509_13713} {RNA1509_13713, RNA815_12096} |
| 3. | MligTC455_10882 | 4884 | 101.75 | Mlig455_019677, Mlig455_048100 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.285 Region-enriched R4: 1.196/0.00018 |
ACACA | 0.976 | - | - | - | - | 0.976 | - | Mlig455_019677 {REF} {Length: 12253} {Pfam: Acetyl-CoA carboxylase, central region [PF08326.14, score=702.7]; Carboxyl transferase domain [PF01039.24, score=525.7]; Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=159.2]; Biotin carboxylase, N-terminal domain [PF00289.24, score=111.6]; Biotin carboxylase C-terminal domain [PF02785.21, score=68.4]; Biotin-requiring enzyme [PF00364.24, score=46.9]} {Human: ENSG00000278540, ACACA, acetyl-CoA carboxylase alpha, [RH, Score=2355, Expect=0.0]; ENSG00000275176, ACACA, acetyl-CoA carboxylase alpha, [RH, Score=2355, Expect=0.0]} {Mouse: ENSMUSG00000020532, Acaca, acetyl-Coenzyme A carboxylase alpha, [RH, Score=2358, Expect=0.0]} {Dmel: FBgn0033246, ACC, Acetyl-CoA carboxylase, [RH, Score=2313, Expect=0.0]} {Celegans: WBGene00004076, pod-2, [RH, Score=581, Expect=3e-170]} {Smed: dd_Smed_v6_7598_0_1, dd_Smed_v6_7598_0_1, [RH, Score=2350, Expect=0.0]} {RNA1509_1322, RNA1509_44629, RNA1509_47984} {RNA1310_330.1, RNA1509_44629, RNA1509_47984} {RNA1509_44629, RNA1509_47984, RNA815_64} Mlig455_048100 {REF} {Length: 11082} {TRANSSPLICED} {Pfam: Acetyl-CoA carboxylase, central region [PF08326.14, score=704.1]; Carboxyl transferase domain [PF01039.24, score=525.7]; Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=164.3]; Biotin carboxylase, N-terminal domain [PF00289.24, score=111.2]; Biotin carboxylase C-terminal domain [PF02785.21, score=68.9]; Biotin-requiring enzyme [PF00364.24, score=47.2]} {Human: ENSG00000275176, ACACA, acetyl-CoA carboxylase alpha, [RH, Score=2362, Expect=0.0]; ENSG00000278540, ACACA, acetyl-CoA carboxylase alpha, [RH, Score=2362, Expect=0.0]} {Mouse: ENSMUSG00000020532, Acaca, acetyl-Coenzyme A carboxylase alpha, [RH, Score=2363, Expect=0.0]} {Dmel: FBgn0033246, ACC, Acetyl-CoA carboxylase, [RH, Score=2319, Expect=0.0]} {Celegans: WBGene00004076, pod-2, [RH, Score=593, Expect=9e-175]} {Smed: dd_Smed_v6_7598_0_1, dd_Smed_v6_7598_0_1, [RH, Score=2355, Expect=0.0]} {RNA1509_1322, RNA1509_6585} {RNA1310_330.1, RNA1509_1322, RNA1509_6585} {RNA1509_1322, RNA1509_6585, RNA815_64} |
| 4. | MligTC455_36578 | 5214 | 108.63 | Mlig455_043909 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.402 |
PSMC6 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_043909 {REF} {Length: 2375} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=145.5]; AAA+ lid domain [PF17862.3, score=45.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=34.2]; AAA ATPase domain [PF13191.8, score=33.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=26.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.3]; AAA domain [PF13401.8, score=20.5]} {Human: ENSG00000100519, PSMC6, proteasome 26S subunit, ATPase 6, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000021832, Psmc6, proteasome (prosome, macropain) 26S subunit, ATPase, 6, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0028685, Rpt4, Regulatory particle triple-A ATPase 4, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00004504, rpt-4, Probable 26S protease regulatory subunit 10B, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_2133_0_1, dd_Smed_v6_2133_0_1, [RH, Score=697, Expect=0.0]} {RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1310_14071, RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1509_12298, RNA1509_1468, RNA1509_15727, RNA815_6834} |
| 5. | MligTC455_38787 | 26 | 0.53 | Mlig455_063549 | Neo: - Age: - |
0.958 | 0.958 | - | - | - | - | - | Mlig455_063549 {REF} {Length: 186} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551} | |
| 6. | MligTC455_51816 | 845 | 17.6 | Mlig455_002795, Mlig455_002810 | Neo: - Age: - |
ZDHHC17 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_002795 {REF} {Length: 2018} {Pfam: Ligand-gated ion channel [PF00060.28, score=41.4]} {RNA1509_25098} {RNA1310_16351} {RNA815_15602} Mlig455_002810 {REF} {Length: 6458} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.3]; Ankyrin repeats (many copies) [PF13857.8, score=93.3]; Ankyrin repeats (many copies) [PF13637.8, score=90.4]; DHHC palmitoyltransferase [PF01529.22, score=80.3]; Ankyrin repeat [PF13606.8, score=78.1]; Ankyrin repeat [PF00023.32, score=73.0]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=160, Expect=3e-41]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=157, Expect=2e-40]} {Dmel: FBgn0029137, Patsas, [Score=311, Expect=4e-98]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=217, Expect=2e-63]} {RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684} {RNA1310_9910, RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684} {RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684, RNA815_13589} |
| 7. | MligTC455_50508 | 947 | 19.73 | Mlig455_067809 | Neo: - Age: Down-Up-Up |
UBE2Z | 0.956 | 0.956 | - | - | - | - | - | Mlig455_067809 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=80.1]} {Human: ENSG00000159202, UBE2Z, ubiquitin conjugating enzyme E2 Z, [Score=124, Expect=2e-32]} {Mouse: ENSMUSG00000014349, Ube2z, ubiquitin-conjugating enzyme E2Z, [Score=124, Expect=1e-32]} {Dmel: FBgn0266717, Bruce, BIR repeat containing ubiquitin-conjugating enzyme, [Score=75.1, Expect=1e-14]} {Celegans: WBGene00006712, ubc-17, Probable ubiquitin-conjugating enzyme protein 17, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_2721_0_1, dd_Smed_v6_2721_0_1, [Score=127, Expect=6e-35]} {RNA1509_23001} {RNA1310_23166.1} {RNA815_9851.1} |
| 8. | MligTC455_11434 | 205 | 4.27 | Mlig455_042424 | Neo: - Age: - Region-enriched R4: 2.953/0.02840 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_042424 {REF} {Length: 2287} {Pfam: Organic solute transporter Ostalpha [PF03619.18, score=51.5]} {RNA1509_20658} {RNA1310_21540, RNA1509_20658} {RNA1509_20658, RNA815_14029} | |
| 9. | MligTC455_20346 | 169 | 3.51 | Mlig455_045662 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_045662 {REF} {Length: 1251} {TRANSSPLICED} {RNA1509_12723, RNA1509_49607} {RNA1310_26083, RNA1509_49607} {RNA1509_49607, RNA815_11437} | |
| 10. | MligTC455_26985 | 11727 | 244.31 | Mlig455_067101 | Neo: - Age: logFC(26M/2M)=-0.405 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_067101 {REF} {Length: 1375} {RNA1509_18861} {RNA1310_20071} {RNA815_8472} | |
| 11. | MligTC455_46746 | 155 | 3.22 | Mlig455_050385 | Neo: - Age: - |
ANKRD11 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_050385 {REF} {Length: 5095} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.7]; Ankyrin repeats (many copies) [PF13637.8, score=63.7]; Ankyrin repeats (many copies) [PF13857.8, score=61.1]; Ankyrin repeat [PF00023.32, score=55.4]; Ankyrin repeat [PF13606.8, score=44.6]} {Human: ENSG00000167522, ANKRD11, ankyrin repeat domain 11, [RH, Score=136, Expect=2e-31]} {Mouse: ENSMUSG00000035569, Ankrd11, ankyrin repeat domain 11, [RH, Score=137, Expect=8e-32]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [RH, Score=132, Expect=2e-30]} {Dmel: FBgn0036305, CG10984, [RH, Score=105, Expect=1e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=91.7, Expect=4e-18]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [RH, Score=154, Expect=4e-38]} {RNA1509_17750} {RNA1310_3406, RNA1509_17750} {RNA1509_17750, RNA815_33283} |
| 12. | MligTC455_43588 | 1419 | 29.57 | Mlig455_002159, Mlig455_002304 | Neo: - Age: logFC(26M/2M)=0.283 Region-enriched R4: 2.039/0.00360 |
CYP2J2 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_002159 {REF} {Length: 1922} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839} {RNA815_5371} Mlig455_002304 {REF} {Length: 2481} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839, RNA1509_5363} {RNA1509_5363, RNA815_5371} |
Berezikov Lab - 2020-2021 © ERIBA