Data search
Results for MligTC455_50137
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50137 | 628 | 13.08 | Mlig455_005635, Mlig455_005679 | Neo: - Age: Down-Up-Up |
CAPN3, CAPN9 | Mlig455_005635 {REF} {Length: 3216} {Pfam: Calpain family cysteine protease [PF00648.23, score=409.5]; Calpain large subunit, domain III [PF01067.24, score=135.4]; EF hand [PF00036.34, score=33.7]; EF-hand domain pair [PF13499.8, score=27.9]; EF-hand domain [PF13405.8, score=26.5]; EF-hand domain pair [PF13833.8, score=26.3]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=573, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [Score=560, Expect=0.0]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=570, Expect=0.0]; ENSMUSG00000079110, Capn3, calpain 3, [Score=559, Expect=0.0]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=573, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=442, Expect=9e-145]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=719, Expect=0.0]} {RNA1509_37893, RNA1509_52146, RNA1509_58534} {RNA1310_4156, RNA1509_37893, RNA1509_52146, RNA1509_58534} {RNA1509_37893, RNA1509_52146, RNA1509_58534, RNA815_1243.1} Mlig455_005679 {REF} {Length: 1830} {Pfam: Calpain family cysteine protease [PF00648.23, score=146.2]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=128, Expect=2e-33]; ENSG00000137225, CAPN11, calpain 11, [Score=126, Expect=9e-33]; ENSG00000092529, CAPN3, calpain 3, [Score=124, Expect=7e-32]; ENSG00000014216, CAPN1, calpain 1, [Score=123, Expect=1e-31]; ENSG00000203697, CAPN8, calpain 8, [Score=122, Expect=8e-32]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=132, Expect=4e-35]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=150, Expect=6e-42]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=125, Expect=8e-33]} {Smed: dd_Smed_v6_1971_0_2, dd_Smed_v6_1971_0_2, [Score=208, Expect=5e-63]} {RNA1509_58534} {RNA1310_4156} {RNA815_1243.2} |
Cumulative graph for MligTC455_50137
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.954 | 3.848 | 0.29251 | 0.94460 | |
| RegionR2 | -0.005 | 3.848 | 0.99056 | 1.00000 | |
| RegionR3 | -0.708 | 3.848 | 0.08267 | 0.50881 | |
| RegionR4 | -0.177 | 3.848 | 0.70510 | 0.99247 | |
| RegionR5 | -0.836 | 3.848 | 0.03226 | 0.13675 | |
| RegionR6 | 0.23 | 3.848 | 0.54706 | 1.00000 | |
| RegionR7 | 0.072 | 3.848 | 0.89033 | 1.00000 | |
| RegionR8 | 0.471 | 3.848 | 0.45991 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.902 | 3.848 | 0.07340 | 0.76135 | |
| RegenerationR2 | -0.537 | 3.848 | 0.18420 | 0.62669 | |
| RegenerationR3 | 0.146 | 3.848 | 0.75816 | 0.96707 | |
| RegenerationR4 | 0.001 | 3.848 | 0.99707 | 1.00000 | |
| RegenerationR5 | 0.796 | 3.848 | 0.06833 | 0.41086 | |
| RegenerationR6 | -0.773 | 3.848 | 0.08962 | 0.37305 | |
| RegenerationBL | 0.643 | 3.848 | 0.15628 | 0.47299 | |
| RegenerationTP | 0.453 | 3.848 | 0.39316 | 0.82448 |
Genes with expression patterns similar to MligTC455_50137
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50137 | 628 | 13.08 | Mlig455_005635, Mlig455_005679 | Neo: - Age: Down-Up-Up |
CAPN3, CAPN9 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005635 {REF} {Length: 3216} {Pfam: Calpain family cysteine protease [PF00648.23, score=409.5]; Calpain large subunit, domain III [PF01067.24, score=135.4]; EF hand [PF00036.34, score=33.7]; EF-hand domain pair [PF13499.8, score=27.9]; EF-hand domain [PF13405.8, score=26.5]; EF-hand domain pair [PF13833.8, score=26.3]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=573, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [Score=560, Expect=0.0]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=570, Expect=0.0]; ENSMUSG00000079110, Capn3, calpain 3, [Score=559, Expect=0.0]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=573, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=442, Expect=9e-145]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=719, Expect=0.0]} {RNA1509_37893, RNA1509_52146, RNA1509_58534} {RNA1310_4156, RNA1509_37893, RNA1509_52146, RNA1509_58534} {RNA1509_37893, RNA1509_52146, RNA1509_58534, RNA815_1243.1} Mlig455_005679 {REF} {Length: 1830} {Pfam: Calpain family cysteine protease [PF00648.23, score=146.2]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=128, Expect=2e-33]; ENSG00000137225, CAPN11, calpain 11, [Score=126, Expect=9e-33]; ENSG00000092529, CAPN3, calpain 3, [Score=124, Expect=7e-32]; ENSG00000014216, CAPN1, calpain 1, [Score=123, Expect=1e-31]; ENSG00000203697, CAPN8, calpain 8, [Score=122, Expect=8e-32]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=132, Expect=4e-35]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=150, Expect=6e-42]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=125, Expect=8e-33]} {Smed: dd_Smed_v6_1971_0_2, dd_Smed_v6_1971_0_2, [Score=208, Expect=5e-63]} {RNA1509_58534} {RNA1310_4156} {RNA815_1243.2} |
| 2. | MligTC455_39606 | 760 | 15.83 | Mlig455_041071, Mlig455_041073, Mlig455_064712 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.586 Region-enriched R7: 2.475/0.00685 |
AL035078.4, CALU, RCN1 | 1.741 | - | - | - | 0.791 | 0.950 | - | Mlig455_041071 {REF} {Length: 756} {Human: ENSG00000285283, AL035078.4, novel protein, [Score=45.8, Expect=1e-05]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=46.6, Expect=5e-06]} {Celegans: WBGene00015646, mlt-10, [Score=66.2, Expect=7e-13]} {RNA1509_42339} {RNA1310_2126} {RNA815_1130} Mlig455_041073 {REF} {Length: 854} {Pfam: EF-hand domain pair [PF13499.8, score=20.9]; EF-hand domain [PF13405.8, score=18.8]; EF hand [PF00036.34, score=18.3]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=56.2, Expect=1e-09]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=52.4, Expect=1e-08]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=57.0, Expect=3e-10]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=53.1, Expect=5e-09]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=49.7, Expect=5e-08]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} Mlig455_064712 {REF} {Length: 2449} {Pfam: EF hand [PF00036.34, score=58.7]; EF-hand domain pair [PF13499.8, score=58.2]; EF-hand domain [PF13405.8, score=50.6]; EF hand [PF13202.8, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=20.8]; EF-hand domain pair [PF13833.8, score=19.4]} {Human: ENSG00000128595, CALU, calumenin, [Score=85.9, Expect=1e-17]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=84.7, Expect=1e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=84.7, Expect=1e-17]} {Celegans: WBGene00015646, mlt-10, [Score=177, Expect=1e-47]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=109, Expect=3e-26]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} |
| 3. | MligTC455_39348 | 410 | 8.54 | Mlig455_054310 | Neo: - Age: - |
ERG | 0.972 | - | - | 0.972 | - | - | - | Mlig455_054310 {REF} {Length: 2524} {Pfam: Ets-domain [PF00178.24, score=93.5]} {Human: ENSG00000157554, ERG, ERG, ETS transcription factor, [Score=92.4, Expect=4e-20]; ENSG00000117036, ETV3, ETS variant 3, [Score=92.0, Expect=8e-20]; ENSG00000151702, FLI1, Fli-1 proto-oncogene, ETS transcription factor, [Score=90.1, Expect=2e-19]; ENSG00000253831, ETV3L, ETS variant 3 like, [Score=90.1, Expect=1e-19]; ENSG00000135373, EHF, ETS homologous factor, [Score=87.8, Expect=5e-19]} {Mouse: ENSMUSG00000040732, Erg, ETS transcription factor, [Score=92.4, Expect=3e-20]; ENSMUSG00000003382, Etv3, ets variant 3, [Score=91.7, Expect=6e-20]; ENSMUSG00000016087, Fli1, Friend leukemia integration 1, [Score=90.1, Expect=2e-19]} {Dmel: FBgn0005660, Ets21C, Ets at 21C, [Score=87.8, Expect=2e-19]} {Celegans: WBGene00016600, ets-5, ETS class transcription factor, [Score=87.0, Expect=6e-20]} {Smed: dd_Smed_v6_11113_0_1, dd_Smed_v6_11113_0_1, [Score=86.7, Expect=7e-19]} {RNA1509_27900, RNA1509_55575} {RNA1310_26221, RNA1509_27900} {RNA1509_27900, RNA815_19654} |
| 4. | MligTC455_19844 | 270 | 5.62 | Mlig455_068340 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_068340 {REF} {Length: 348} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_28703} {RNA1310_21339} {RNA815_12138.1} | |
| 5. | MligTC455_50155 | 542 | 11.29 | Mlig455_010493 | Neo: - Age: Down-Down-Up Regeneration-upregulated BL: 2.962 Regeneration-enriched BL: 2.962 |
BEST2 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_010493 {REF} {Length: 2707} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=157.0]} {Human: ENSG00000039987, BEST2, bestrophin 2, [Score=102, Expect=2e-22]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=103, Expect=6e-23]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=178, Expect=6e-48]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=146, Expect=2e-37]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=235, Expect=7e-71]} {RNA1509_40942} {RNA1310_14129.1} {RNA815_5240} |
| 6. | MligTC455_33605 | 128 | 2.67 | Mlig455_062103 | Neo: - Age: - |
NOTCH3 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_062103 {REF} {Length: 3428} {Pfam: Calcium-binding EGF domain [PF07645.17, score=35.8]; Delta serrate ligand [PF01414.21, score=27.6]; EGF-like domain [PF00008.29, score=24.2]; EGF domain [PF12947.9, score=21.2]; Human growth factor-like EGF [PF12661.9, score=20.9]; EGF-like domain [PF07974.15, score=20.4]} {Human: ENSG00000074181, NOTCH3, notch 3, [Score=82.0, Expect=1e-15]; ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=81.3, Expect=1e-15]; ENSG00000188107, EYS, eyes shut homolog (Drosophila), [Score=79.7, Expect=7e-15]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=82.8, Expect=2e-16]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=82.4, Expect=7e-16]; ENSMUSG00000038146, Notch3, notch 3, [Score=80.5, Expect=3e-15]} {Dmel: FBgn0000463, Dl, dorsal, [Score=82.8, Expect=2e-16]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=82.8, Expect=2e-16]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=100, Expect=9e-23]} {RNA1509_59016} {RNA1310_5151.1, RNA1509_59016} {RNA1509_59016, RNA815_16030} |
| 7. | MligTC455_43181 | 570 | 11.88 | Mlig455_000235, Mlig455_058496 | Neo: - Age: Up-Down-Down |
GABRG2 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_000235 {REF} {Length: 2985} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=28.7]} {Human: ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=71.2, Expect=9e-13]; ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=68.6, Expect=2e-11]; ENSG00000163285, GABRG1, gamma-aminobutyric acid type A receptor gamma1 subunit, [Score=68.6, Expect=2e-11]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=72.0, Expect=1e-12]; ENSMUSG00000001260, Gabrg1, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1, [Score=70.1, Expect=6e-12]; ENSMUSG00000020436, Gabrg2, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2, [Score=69.7, Expect=7e-12]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_10171_0_2, dd_Smed_v6_10171_0_2, [Score=440, Expect=3e-144]} {RNA1509_31476} {RNA1310_7448.1} {RNA815_6894} Mlig455_058496 {REF} {Length: 3260} {Smed: dd_Smed_v6_13861_0_2, dd_Smed_v6_13861_0_2, [RH, Score=91.3, Expect=2e-23]} {RNA1509_31476} {RNA1310_7448.1} {RNA815_11721.1} |
| 8. | MligTC455_43292 | 603 | 12.56 | Mlig455_043465 | Neo: - Age: logFC(26M/2M)=0.315 |
HID1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_043465 {REF} {Length: 5057} {Pfam: High-temperature-induced dauer-formation protein [PF12722.9, score=924.3]; Dyggve-Melchior-Clausen syndrome protein [PF09742.11, score=753.7]; Protein of unknown function (DUF2722) [PF10846.10, score=19.9]} {Human: ENSG00000167861, HID1, HID1 domain containing, [RH, Score=1105, Expect=0.0]} {Mouse: ENSMUSG00000034586, Hid1, HID1 domain containing, [RH, Score=1106, Expect=0.0]} {Dmel: FBgn0033713, CG8841, [RH, Score=1028, Expect=0.0]} {Celegans: WBGene00001844, hid-1, HID-1; High temperature-Induced Dauer formation, [RH, Score=829, Expect=0.0]} {Smed: dd_Smed_v6_4543_0_1, dd_Smed_v6_4543_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_22998, RNA1509_52413} {RNA1310_2060, RNA1509_52413} {RNA1509_52413, RNA815_13082.1} |
| 9. | MligTC455_24892 | 341 | 7.11 | Mlig455_022228 | Neo: - Age: logFC(26M/2M)=-0.387 |
BICC1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_022228 {REF} {Length: 4609} {Pfam: KH domain [PF00013.31, score=50.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=21.1]} {Human: ENSG00000122870, BICC1, BicC family RNA binding protein 1, [RH, Score=167, Expect=4e-42]} {Mouse: ENSMUSG00000014329, Bicc1, BicC family RNA binding protein 1, [RH, Score=164, Expect=2e-41]} {Dmel: FBgn0000182, BicC, Bicaudal C, [RH, Score=135, Expect=3e-32]} {Celegans: WBGene00000246, bcc-1, BiCaudal C (Drosophila) homolog, [RH, Score=118, Expect=2e-27]} {Smed: dd_Smed_v6_38277_0_1, dd_Smed_v6_38277_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_16179, RNA1509_48630} {RNA1310_7484, RNA1509_48630} {RNA1509_48630, RNA815_16765} |
| 10. | MligTC455_07717 | 21 | 0.44 | Mlig455_030073 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_030073 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_49895} {RNA1310_37576} {RNA815_52398} | |
| 11. | MligTC455_28374 | 1066 | 22.22 | Mlig455_034264, Mlig455_067314 | Neo: - Age: - Region-enriched R5: 1.568/0.00027 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_034264 {REF} {Length: 984} {TRANSSPLICED} {RNA1509_43185, RNA1509_47947} {RNA1310_27620, RNA1509_43185} {RNA1509_43185, RNA815_36336} Mlig455_067314 {REF} {Length: 3929} {RNA1509_20759, RNA1509_52801} {RNA1310_20178, RNA1509_52801} {RNA1509_52801, RNA815_35358} |
|
| 12. | MligTC455_09960 | 34 | 0.7 | Mlig455_040438 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_040438 {REF} {Length: 640} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_77567} | |
| 13. | MligTC455_27881 | 54 | 1.12 | Mlig455_062466 | Neo: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} | |
| 14. | MligTC455_44823 | 63 | 1.31 | Mlig455_036159 | Neo: - Age: Down-Down-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_036159 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=290.8]; Sulfotransferase family [PF13469.8, score=46.8]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=144, Expect=4e-41]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006} | |
| 15. | MligTC455_52247 | 962 | 20.03 | Mlig455_041790 | Neo: - Age: - |
CSK | 0.95 | - | - | - | - | - | 0.950 | Mlig455_041790 {REF} {Length: 2348} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=221.0]; Protein kinase domain [PF00069.27, score=124.6]; SH2 domain [PF00017.26, score=86.0]; Kinase-like [PF14531.8, score=21.9]} {Human: ENSG00000103653, CSK, C-terminal Src kinase, [Score=317, Expect=1e-104]} {Mouse: ENSMUSG00000032312, Csk, c-src tyrosine kinase, [Score=315, Expect=4e-104]} {Dmel: FBgn0262081, Csk, C-terminal Src kinase, [RH, Score=332, Expect=1e-106]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=293, Expect=1e-94]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=261, Expect=7e-83]} {RNA1509_4512} {RNA1310_6944.1} {RNA815_2199} |