TomoSeq data search

Data search

Results for MligTC455_50151

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50151

340

7.09

Mlig455_056050

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.337

Region-enriched R5: 1.672/0.04901

BDH1

Mlig455_056050 {REF} {Length: 2192} {TRANSSPLICED} {Pfam: Mitochondrial pyruvate carriers [PF03650.15, score=140.6]; short chain dehydrogenase [PF00106.27, score=139.7]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=96.7]; KR domain [PF08659.12, score=20.2]} {Human: ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=171, Expect=3e-48]; ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=171, Expect=3e-48]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=175, Expect=1e-49]} {Dmel: FBgn0037715, CG9399, [RH, Score=149, Expect=9e-43]} {Celegans: WBGene00018765, mpc-2, Probable mitochondrial pyruvate carrier 2, [RH, Score=135, Expect=1e-37]} {Smed: dd_Smed_v6_6084_0_1, dd_Smed_v6_6084_0_1, [RH, Score=179, Expect=1e-54]} {RNA1509_18804} {RNA1310_15769} {RNA815_8900.1}

Cumulative graph for MligTC455_50151

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.755	3.403	0.18007	0.80884
RegionR2	1.054	3.403	0.27806	0.66441
RegionR3	1.433	3.403	0.05132	0.39668
RegionR4	1.3	3.403	0.14412	0.38944
RegionR5	1.672	3.403	0.00798	0.04901
RegionR6	1.277	3.403	0.10067	0.58260
RegionR7	-0.718	3.403	0.97468	1.00000
RegionR8	-0.263	3.403	0.92411	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.266	3.403	0.07097	0.75276
RegenerationR2	-0.112	3.403	0.82668	0.99618
RegenerationR3	0.023	3.403	0.96679	1.00000
RegenerationR4	0.549	3.403	0.32930	0.76420
RegenerationR5	-0.436	3.403	0.35266	0.76586
RegenerationR6	0.729	3.403	0.15488	0.48123
RegenerationBL	1.906	3.403	0.00752	0.08458
RegenerationTP	0.321	3.403	0.77140	1.00000

Genes with expression patterns similar to MligTC455_50151

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50151	340	7.09	Mlig455_056050	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.337 Region-enriched R5: 1.672/0.04901	BDH1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056050 {REF} {Length: 2192} {TRANSSPLICED} {Pfam: Mitochondrial pyruvate carriers [PF03650.15, score=140.6]; short chain dehydrogenase [PF00106.27, score=139.7]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=96.7]; KR domain [PF08659.12, score=20.2]} {Human: ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=171, Expect=3e-48]; ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=171, Expect=3e-48]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=175, Expect=1e-49]} {Dmel: FBgn0037715, CG9399, [RH, Score=149, Expect=9e-43]} {Celegans: WBGene00018765, mpc-2, Probable mitochondrial pyruvate carrier 2, [RH, Score=135, Expect=1e-37]} {Smed: dd_Smed_v6_6084_0_1, dd_Smed_v6_6084_0_1, [RH, Score=179, Expect=1e-54]} {RNA1509_18804} {RNA1310_15769} {RNA815_8900.1}
2.	MligTC455_12589	239	4.97	Mlig455_049834	Neo: - Age: - Region-enriched R4: 2.636/0.03980	SLC1A7	1.761	-	-	-	0.958	-	0.803	Mlig455_049834 {REF} {Length: 2371} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=406.3]} {Human: ENSG00000162383, SLC1A7, solute carrier family 1 member 7, [RH, Score=439, Expect=8e-149]; ENSG00000106688, SLC1A1, solute carrier family 1 member 1, [RH, Score=430, Expect=1e-145]} {Mouse: ENSMUSG00000024935, Slc1a1, solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1, [RH, Score=447, Expect=8e-153]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [RH, Score=364, Expect=8e-121]} {Celegans: WBGene00001620, glt-1, Excitatory amino acid transporter, [Score=427, Expect=1e-145]} {Smed: dd_Smed_v6_1106_0_1, dd_Smed_v6_1106_0_1, [Score=449, Expect=2e-154]} {RNA1509_28921} {RNA1310_19422.1} {RNA815_7338}
3.	MligTC455_18471	42	0.88	Mlig455_016830	Neo: - Age: -		1.662	-	-	-	0.704	-	0.958	Mlig455_016830 {REF} {Length: 1535} {TRANSSPLICED} {RNA1509_24487} {RNA1310_16089.1} {RNA815_13960}
4.	MligTC455_16981	175	3.66	Mlig455_067617	Neo: Irradiation Age: Up-Down-Up	ZCCHC10	0.952	-	-	-	-	-	0.952	Mlig455_067617 {REF} {Length: 1386} {TRANSSPLICED} {Pfam: Zinc knuckle [PF13917.8, score=50.4]; Nuclear RNA-splicing-associated protein [PF10500.11, score=19.7]} {Human: ENSG00000155329, ZCCHC10, zinc finger CCHC-type containing 10, [RH, Score=63.2, Expect=2e-12]} {Mouse: ENSMUSG00000018239, Zcchc10, zinc finger, CCHC domain containing 10, [RH, Score=60.5, Expect=2e-11]} {Dmel: FBgn0038389, CG5516, [RH, Score=56.2, Expect=4e-10]} {Smed: dd_Smed_v6_6155_0_1, dd_Smed_v6_6155_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_11923, RNA1509_27692, RNA1509_58107} {RNA1310_34233.1, RNA1509_11923, RNA1509_27692, RNA1509_58107} {RNA1509_11923, RNA1509_27692, RNA1509_58107, RNA815_13751.2}
5.	MligTC455_37334	357	7.45	Mlig455_059143	Neo: - Age: logFC(26M/2M)=-0.423	CASK	0.952	-	-	-	-	-	0.952	Mlig455_059143 {REF} {Length: 6140} {Pfam: Protein kinase domain [PF00069.27, score=221.9]; Guanylate kinase [PF00625.23, score=200.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.4]; PDZ domain [PF00595.26, score=62.0]; L27 domain [PF02828.18, score=61.1]; PDZ domain [PF17820.3, score=29.0]; Variant SH3 domain [PF07653.19, score=24.0]; SH3 domain [PF00018.30, score=22.2]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [RH, Score=1178, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [RH, Score=1177, Expect=0.0]} {Dmel: FBgn0013759, CASK, [RH, Score=1057, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=793, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_1, dd_Smed_v6_7723_0_1, [RH, Score=1321, Expect=0.0]} {RNA1509_5249} {RNA1310_3326.1} {RNA815_879}

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