TomoSeq data search

Data search

Results for MligTC455_50212

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50212	2259	47.06	Mlig455_039258, Mlig455_039283	Neo: - Age: - Regeneration-downregulated BL: -3.105 Regeneration-depleted BL: -3.105	ASGR1	Mlig455_039258 {REF} {Length: 6117} {Pfam: Lectin C-type domain [PF00059.23, score=37.4]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=6e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=56.2, Expect=4e-08]} {RNA1509_3056} {RNA1310_1380.2} {RNA815_414} Mlig455_039283 {REF} {Length: 6894} {Pfam: Lectin C-type domain [PF00059.23, score=38.0]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=5e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=55.5, Expect=6e-08]} {RNA1509_45924} {RNA1310_1380.2} {RNA815_414}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50212

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.282	5.793	0.13841	0.74404
RegionR2	-0.449	5.793	0.29927	0.68809
RegionR3	0.258	5.793	0.44791	0.96067
RegionR4	0.386	5.793	0.34953	0.67108
RegionR5	0.343	5.793	0.28735	0.61802
RegionR6	0.347	5.793	0.30281	0.89381
RegionR7	0.447	5.793	0.21949	0.83978
RegionR8	-0.049	5.793	0.91075	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.131	5.793	0.92400	1.00000
RegenerationR2	0.375	5.793	0.34731	0.78022
RegenerationR3	0.406	5.793	0.32986	0.75575
RegenerationR4	0.183	5.793	0.67446	0.94405
RegenerationR5	0.406	5.793	0.31054	0.73643
RegenerationR6	-0.408	5.793	0.33166	0.67779
RegenerationBL	-3.105	5.793	0.00000	0.00006	Specific for BL: -3.105
RegenerationTP	0.22	5.793	0.60744	0.96530

Genes with expression patterns similar to MligTC455_50212

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50212	2259	47.06	Mlig455_039258, Mlig455_039283	Neo: - Age: - Regeneration-downregulated BL: -3.105 Regeneration-depleted BL: -3.105	ASGR1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039258 {REF} {Length: 6117} {Pfam: Lectin C-type domain [PF00059.23, score=37.4]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=6e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=56.2, Expect=4e-08]} {RNA1509_3056} {RNA1310_1380.2} {RNA815_414} Mlig455_039283 {REF} {Length: 6894} {Pfam: Lectin C-type domain [PF00059.23, score=38.0]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=5e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=55.5, Expect=6e-08]} {RNA1509_45924} {RNA1310_1380.2} {RNA815_414}
2.	MligTC455_25128	376	7.84	Mlig455_037046	Neo: Irradiation Age: -	GPR75-ASB3	0.974	-	-	-	0.974	-	-	Mlig455_037046 {REF} {Length: 3814} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.7]; Ankyrin repeats (many copies) [PF13637.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.0]; Ankyrin repeat [PF13606.8, score=78.8]; Ankyrin repeat [PF00023.32, score=70.5]; SOCS box [PF07525.18, score=35.8]} {Human: ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=105, Expect=2e-23]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=99.0, Expect=9e-22]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=4e-17]} {Celegans: WBGene00019782, M60.7, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=90.9, Expect=4e-19]} {RNA1509_11976} {RNA1310_19298, RNA1509_11976} {RNA1509_11976, RNA815_7424.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_50212

2259

47.06

Mlig455_039258, Mlig455_039283

Neo: -

Age: -

Regeneration-downregulated BL: -3.105

Regeneration-depleted BL: -3.105

ASGR1

1.000

MligTC455_25128

376

7.84

Mlig455_037046

Neo: Irradiation

Age: -

GPR75-ASB3

0.974

Mlig455_037046 {REF} {Length: 3814} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.7]; Ankyrin repeats (many copies) [PF13637.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.0]; Ankyrin repeat [PF13606.8, score=78.8]; Ankyrin repeat [PF00023.32, score=70.5]; SOCS box [PF07525.18, score=35.8]} {Human: ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=105, Expect=2e-23]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=99.0, Expect=9e-22]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=4e-17]} {Celegans: WBGene00019782, M60.7, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=90.9, Expect=4e-19]} {RNA1509_11976} {RNA1310_19298, RNA1509_11976} {RNA1509_11976, RNA815_7424.1}