TomoSeq data search

Data search

Results for MligTC455_25128

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25128

376

7.84

Mlig455_037046

Neo: Irradiation

Age: -

GPR75-ASB3

Mlig455_037046 {REF} {Length: 3814} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.7]; Ankyrin repeats (many copies) [PF13637.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.0]; Ankyrin repeat [PF13606.8, score=78.8]; Ankyrin repeat [PF00023.32, score=70.5]; SOCS box [PF07525.18, score=35.8]} {Human: ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=105, Expect=2e-23]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=99.0, Expect=9e-22]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=4e-17]} {Celegans: WBGene00019782, M60.7, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=90.9, Expect=4e-19]} {RNA1509_11976} {RNA1310_19298, RNA1509_11976} {RNA1509_11976, RNA815_7424.1}

Cumulative graph for MligTC455_25128

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.472	3.364	0.11861	0.70840
RegionR2	0.858	3.364	0.49602	0.87680
RegionR3	2.064	3.364	0.04236	0.35886
RegionR4	1.057	3.364	0.39987	0.72625
RegionR5	1.306	3.364	0.21457	0.51337
RegionR6	1.804	3.364	0.07831	0.51874
RegionR7	0.288	3.364	0.75815	1.00000
RegionR8	-0.906	3.364	0.98426	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.875	3.364	0.23615	0.96568
RegenerationR2	0.032	3.364	0.97383	1.00000
RegenerationR3	0.322	3.364	0.73673	0.95950
RegenerationR4	0.357	3.364	0.72585	0.96333
RegenerationR5	0.31	3.364	0.74551	0.97055
RegenerationR6	-0.167	3.364	0.86492	1.00000
RegenerationBL	-1.536	3.364	0.24065	0.59390
RegenerationTP	1.441	3.364	0.23324	0.67859

Genes with expression patterns similar to MligTC455_25128

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25128	376	7.84	Mlig455_037046	Neo: Irradiation Age: -	GPR75-ASB3	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_037046 {REF} {Length: 3814} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.7]; Ankyrin repeats (many copies) [PF13637.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.0]; Ankyrin repeat [PF13606.8, score=78.8]; Ankyrin repeat [PF00023.32, score=70.5]; SOCS box [PF07525.18, score=35.8]} {Human: ENSG00000270898, GPR75-ASB3, GPR75-ASB3 readthrough, [Score=105, Expect=2e-23]; ENSG00000115239, ASB3, ankyrin repeat and SOCS box containing 3, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=99.0, Expect=9e-22]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=4e-17]} {Celegans: WBGene00019782, M60.7, [RH, Score=133, Expect=4e-34]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=90.9, Expect=4e-19]} {RNA1509_11976} {RNA1310_19298, RNA1509_11976} {RNA1509_11976, RNA815_7424.1}
2.	MligTC455_29960	475	9.89	Mlig455_023336	Neo: - Age: - Region-enriched R3: 2.572/0.00504	ANGPTL2	1.695	-	-	0.732	0.963	-	-	Mlig455_023336 {REF} {Length: 2108} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=72.0]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=68.9, Expect=7e-13]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=67.4, Expect=2e-11]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=67.0, Expect=4e-11]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=66.6, Expect=3e-11]} {Dmel: FBgn0033312, CG8642, [Score=62.0, Expect=6e-10]} {RNA1509_30716} {RNA1310_11377.1} {RNA815_4387.1}
3.	MligTC455_50212	2259	47.06	Mlig455_039258, Mlig455_039283	Neo: - Age: - Regeneration-downregulated BL: -3.105 Regeneration-depleted BL: -3.105	ASGR1	0.974	-	-	-	0.974	-	-	Mlig455_039258 {REF} {Length: 6117} {Pfam: Lectin C-type domain [PF00059.23, score=37.4]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=6e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=56.2, Expect=4e-08]} {RNA1509_3056} {RNA1310_1380.2} {RNA815_414} Mlig455_039283 {REF} {Length: 6894} {Pfam: Lectin C-type domain [PF00059.23, score=38.0]} {Human: ENSG00000141505, ASGR1, asialoglycoprotein receptor 1, [Score=57.0, Expect=5e-08]} {Mouse: ENSMUSG00000071158, Gm156, predicted gene 156, [RH, Score=55.5, Expect=6e-08]} {RNA1509_45924} {RNA1310_1380.2} {RNA815_414}
4.	MligTC455_19589	1267	26.39	Mlig455_019782, Mlig455_019805	Neo: - Age: Down-Down-Up Region-enriched R3: 2.513/0.00008 Region-enriched R4: 2.414/0.00063 Region-enriched R5: 2.371/0.00008 Region-enriched R6: 1.844/0.03273		0.97	-	-	-	-	0.970	-	Mlig455_019782 {REF} {Length: 858} {RNA1509_20360} {RNA1310_37068} {RNA815_23648} Mlig455_019805 {REF} {Length: 869} {RNA1509_20360, RNA1509_54648} {RNA1310_37068, RNA1509_54648} {RNA1509_54648, RNA815_23648}
5.	MligTC455_34295	1251	26.06	Mlig455_039417	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.176 Region-enriched R3: 2.357/0.00048 Region-enriched R4: 1.872/0.01857		0.97	-	-	-	-	0.970	-	Mlig455_039417 {REF} {Length: 666} {RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827} {RNA1310_54443, RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827} {RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827, RNA815_29054}
6.	MligTC455_35415	2569	53.52	Mlig455_040549, Mlig455_062089	Neo: - Age: - Region-enriched R2: 1.828/0.00030 Region-enriched R6: 1.548/0.00050	SPON1	0.966	-	-	-	-	-	0.966	Mlig455_040549 {REF} {Length: 3554} {Pfam: Spondin_N [PF06468.15, score=172.2]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=92.5]; Spondin-like TSP1 domain [PF19028.2, score=86.2]; Thrombospondin type 1 domain [PF00090.21, score=43.5]; Reeler domain [PF02014.18, score=33.7]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=5e-60]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=224, Expect=3e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=219, Expect=7e-60]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=376, Expect=7e-117]} {RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1310_4115.1, RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1509_12151, RNA1509_34516, RNA1509_4778, RNA815_2374} Mlig455_062089 {REF} {Length: 3332} {Pfam: Spondin_N [PF06468.15, score=172.9]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=103.7]; Spondin-like TSP1 domain [PF19028.2, score=85.5]; Thrombospondin type 1 domain [PF00090.21, score=47.2]; Reeler domain [PF02014.18, score=34.0]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=1e-59]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=223, Expect=8e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=217, Expect=4e-59]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=3e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=375, Expect=8e-116]} {RNA1509_12151, RNA1509_45559} {RNA1310_4115.1, RNA1509_45559} {RNA1509_45559, RNA815_2374}
7.	MligTC455_11245	531	11.07	Mlig455_056702, Mlig455_060320	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.911		0.964	-	-	-	0.964	-	-	Mlig455_056702 {REF} {Length: 1328} {RNA1509_32947} {RNA1310_19611} {RNA815_10245.1} Mlig455_060320 {REF} {Length: 1950} {RNA1509_32947, RNA1509_43462} {RNA1310_19611, RNA1509_32947, RNA1509_43462} {RNA1509_32947, RNA1509_43462, RNA815_18845}
8.	MligTC455_41883	85	1.77	Mlig455_012612	Neo: - Age: -	ANKRD50	0.961	-	-	-	-	0.961	-	Mlig455_012612 {REF} {Length: 7141} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.8]; Ankyrin repeat [PF13606.8, score=46.8]; Mab-21 protein [PF03281.16, score=41.3]; Ankyrin repeat [PF00023.32, score=37.7]; Helix-turn-helix domain [PF13560.8, score=18.9]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=86.3, Expect=2e-16]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=83.6, Expect=1e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=87.4, Expect=6e-17]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=91.7, Expect=2e-18]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=64.7, Expect=3e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=89.7, Expect=5e-18]} {RNA1509_27676, RNA1509_27730} {RNA1310_22442, RNA1509_27676} {RNA1509_27676, RNA815_2426.1}
9.	MligTC455_20952	2067	43.07	Mlig455_007960, Mlig455_008105, Mlig455_015591	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.359	COL24A1	0.959	-	-	-	-	-	0.959	Mlig455_007960 {REF} {Length: 5756} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=117.0]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=390, Expect=1e-112]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=359, Expect=5e-102]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=1e-105]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=324, Expect=4e-91]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=485, Expect=3e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599} Mlig455_008105 {REF} {Length: 4564} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=412, Expect=2e-120]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=434, Expect=4e-130]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=374, Expect=3e-107]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=4e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [RH, Score=485, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599} Mlig455_015591 {REF} {Length: 4713} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.2]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.9]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=418, Expect=3e-122]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=372, Expect=2e-106]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=354, Expect=1e-100]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=9e-106]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=3e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=486, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141, RNA1509_2270} {RNA1509_2270, RNA815_599}
10.	MligTC455_49197	434	9.04	Mlig455_049307, Mlig455_050644	Neo: - Age: -	SPOPL	0.958	-	-	-	0.958	-	-	Mlig455_049307 {REF} {Length: 1748} {Pfam: BTB/POZ domain [PF00651.33, score=69.0]} {Human: ENSG00000144228, SPOPL, speckle type BTB/POZ protein like, [Score=59.7, Expect=2e-09]} {Mouse: ENSMUSG00000060256, Tdpoz4, TD and POZ domain containing 4, [Score=60.5, Expect=7e-10]; ENSMUSG00000096879, Gm4858, predicted gene 4858, [Score=59.7, Expect=6e-10]; ENSMUSG00000089696, Gm4778, predicted gene 4778, [Score=58.5, Expect=3e-09]} {Dmel: FBgn0264493, rdx, roadkill, [Score=62.0, Expect=2e-10]} {Celegans: WBGene00015463, hpo-9, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_3295_0_1, dd_Smed_v6_3295_0_1, [RH, Score=90.9, Expect=3e-21]} {RNA1310_24479.1} {RNA815_9909} Mlig455_050644 {REF} {Length: 1749} {Pfam: BTB/POZ domain [PF00651.33, score=69.0]} {Human: ENSG00000144228, SPOPL, speckle type BTB/POZ protein like, [Score=59.7, Expect=2e-09]} {Mouse: ENSMUSG00000060256, Tdpoz4, TD and POZ domain containing 4, [Score=60.5, Expect=7e-10]; ENSMUSG00000096879, Gm4858, predicted gene 4858, [Score=59.7, Expect=6e-10]; ENSMUSG00000089696, Gm4778, predicted gene 4778, [Score=58.5, Expect=3e-09]} {Dmel: FBgn0264493, rdx, roadkill, [Score=62.0, Expect=2e-10]} {Celegans: WBGene00015463, hpo-9, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_3295_0_1, dd_Smed_v6_3295_0_1, [RH, Score=90.9, Expect=3e-21]} {RNA1310_24479.1} {RNA815_9909}
11.	MligTC455_22308	1182	24.63	Mlig455_009243	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.663		0.954	-	-	-	-	-	0.954	Mlig455_009243 {REF} {Length: 2029} {RNA1509_466} {RNA1310_10184.1} {RNA815_3434}
12.	MligTC455_00898	410	8.55	Mlig455_046231, Mlig455_068972	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_046231 {REF} {Length: 2553} {RNA1509_60110} {RNA1310_41937, RNA1509_60110} Mlig455_068972 {REF} {Length: 4025} {RNA1509_17147} {RNA1310_59800, RNA1509_17147} {RNA1509_17147, RNA815_35589}

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