TomoSeq data search

Data search

Results for MligTC455_50247

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50247	1392	29.00	Mlig455_036350	Neo: - Age: -		Mlig455_036350 {REF} {Length: 942} {TRANSSPLICED} {RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1310_2461, RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1509_19938, RNA1509_40907, RNA1509_55722, RNA815_24971}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50247

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.419	5.105	0.09189	0.65129
RegionR2	-0.268	5.105	0.47329	0.85889
RegionR3	-0.061	5.105	0.84430	1.00000
RegionR4	0.219	5.105	0.51235	0.83840
RegionR5	0.966	5.105	0.00023	0.00319
RegionR6	0.752	5.105	0.01006	0.16838
RegionR7	-0.067	5.105	0.86004	1.00000
RegionR8	-0.123	5.105	0.78890	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.401	5.105	0.37732	1.00000
RegenerationR2	-0.171	5.105	0.59822	0.91508
RegenerationR3	-0.195	5.105	0.57324	0.89533
RegenerationR4	0.191	5.105	0.57804	0.90468
RegenerationR5	-0.399	5.105	0.19658	0.62876
RegenerationR6	-0.224	5.105	0.49787	0.80480
RegenerationBL	-0.092	5.105	0.80519	1.00000
RegenerationTP	0.064	5.105	0.87739	1.00000

Genes with expression patterns similar to MligTC455_50247

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50247	1392	29	Mlig455_036350	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036350 {REF} {Length: 942} {TRANSSPLICED} {RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1310_2461, RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1509_19938, RNA1509_40907, RNA1509_55722, RNA815_24971}
2.	MligTC455_41592	1224	25.5	Mlig455_017260	Neo: Irradiation Age: -	SPG7	0.967	-	-	-	0.967	-	-	Mlig455_017260 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=133.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.5]; AAA+ lid domain [PF17862.3, score=44.3]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.3]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000197912, SPG7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=450, Expect=3e-146]} {Mouse: ENSMUSG00000000738, Spg7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=445, Expect=1e-145]} {Dmel: FBgn0024992, CG2658, [RH, Score=460, Expect=8e-150]} {Celegans: WBGene00021425, ppgn-1, ParaPleGiN AAA protease family; Paraplegin, [Score=425, Expect=2e-137]} {Smed: dd_Smed_v6_3475_0_1, dd_Smed_v6_3475_0_1, [RH, Score=443, Expect=1e-144]} {RNA1509_5475} {RNA1310_4379, RNA1509_5475} {RNA1509_5475, RNA815_3147}
3.	MligTC455_10940	801	16.7	Mlig455_037884, Mlig455_039044	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.524/0.00467 Region-enriched R4: 1.483/0.04450		0.956	-	-	-	-	-	0.956	Mlig455_037884 {REF} {Length: 3393} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.5, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.2} {RNA815_10460} Mlig455_039044 {REF} {Length: 3029} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.9, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.1, RNA1509_29038} {RNA1509_29038, RNA815_10460}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_50247

1392

Mlig455_036350

Neo: -

Age: -

1.000

MligTC455_41592

1224

25.5

Mlig455_017260

Neo: Irradiation

Age: -

SPG7

0.967

Mlig455_017260 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=133.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.5]; AAA+ lid domain [PF17862.3, score=44.3]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.3]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000197912, SPG7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=450, Expect=3e-146]} {Mouse: ENSMUSG00000000738, Spg7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=445, Expect=1e-145]} {Dmel: FBgn0024992, CG2658, [RH, Score=460, Expect=8e-150]} {Celegans: WBGene00021425, ppgn-1, ParaPleGiN AAA protease family; Paraplegin, [Score=425, Expect=2e-137]} {Smed: dd_Smed_v6_3475_0_1, dd_Smed_v6_3475_0_1, [RH, Score=443, Expect=1e-144]} {RNA1509_5475} {RNA1310_4379, RNA1509_5475} {RNA1509_5475, RNA815_3147}

MligTC455_10940

801

16.7

Mlig455_037884, Mlig455_039044

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.524/0.00467
Region-enriched R4: 1.483/0.04450

0.956

Mlig455_037884 {REF} {Length: 3393} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.5, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.2} {RNA815_10460}

Mlig455_039044 {REF} {Length: 3029} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.9, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.1, RNA1509_29038} {RNA1509_29038, RNA815_10460}