Data search
Results for MligTC455_41592
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41592 | 1224 | 25.50 | Mlig455_017260 | Neo: Irradiation Age: - |
SPG7 | Mlig455_017260 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=133.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.5]; AAA+ lid domain [PF17862.3, score=44.3]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.3]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000197912, SPG7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=450, Expect=3e-146]} {Mouse: ENSMUSG00000000738, Spg7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=445, Expect=1e-145]} {Dmel: FBgn0024992, CG2658, [RH, Score=460, Expect=8e-150]} {Celegans: WBGene00021425, ppgn-1, ParaPleGiN AAA protease family; Paraplegin, [Score=425, Expect=2e-137]} {Smed: dd_Smed_v6_3475_0_1, dd_Smed_v6_3475_0_1, [RH, Score=443, Expect=1e-144]} {RNA1509_5475} {RNA1310_4379, RNA1509_5475} {RNA1509_5475, RNA815_3147} |
Cumulative graph for MligTC455_41592
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.128 | 4.917 | 0.86328 | 1.00000 | |
| RegionR2 | 0.209 | 4.917 | 0.59687 | 0.94835 | |
| RegionR3 | -0.535 | 4.917 | 0.10416 | 0.56487 | |
| RegionR4 | -0.557 | 4.917 | 0.11926 | 0.34578 | |
| RegionR5 | 0.836 | 4.917 | 0.00135 | 0.01296 | |
| RegionR6 | 0.262 | 4.917 | 0.39250 | 0.96689 | |
| RegionR7 | -0.656 | 4.917 | 0.15639 | 0.73088 | |
| RegionR8 | 0.313 | 4.917 | 0.54287 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.511 | 4.917 | 0.64535 | 1.00000 | |
| RegenerationR2 | 0.221 | 4.917 | 0.51536 | 0.87794 | |
| RegenerationR3 | 0.841 | 4.917 | 0.02700 | 0.29565 | |
| RegenerationR4 | 0.558 | 4.917 | 0.13068 | 0.54651 | |
| RegenerationR5 | 0.053 | 4.917 | 0.86898 | 1.00000 | |
| RegenerationR6 | 0.753 | 4.917 | 0.03273 | 0.22597 | |
| RegenerationBL | 0.121 | 4.917 | 0.78705 | 1.00000 | |
| RegenerationTP | -0.058 | 4.917 | 0.90793 | 1.00000 |
Genes with expression patterns similar to MligTC455_41592
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41592 | 1224 | 25.5 | Mlig455_017260 | Neo: Irradiation Age: - |
SPG7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017260 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=133.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.5]; AAA+ lid domain [PF17862.3, score=44.3]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.3]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000197912, SPG7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=450, Expect=3e-146]} {Mouse: ENSMUSG00000000738, Spg7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=445, Expect=1e-145]} {Dmel: FBgn0024992, CG2658, [RH, Score=460, Expect=8e-150]} {Celegans: WBGene00021425, ppgn-1, ParaPleGiN AAA protease family; Paraplegin, [Score=425, Expect=2e-137]} {Smed: dd_Smed_v6_3475_0_1, dd_Smed_v6_3475_0_1, [RH, Score=443, Expect=1e-144]} {RNA1509_5475} {RNA1310_4379, RNA1509_5475} {RNA1509_5475, RNA815_3147} |
| 2. | MligTC455_16942 | 1426 | 29.71 | Mlig455_014138 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.767/0.00000 |
DCP1A | 2.509 | 0.801 | - | - | 0.972 | 0.736 | - | Mlig455_014138 {REF} {Length: 1764} {TRANSSPLICED} {Pfam: Dcp1-like decapping family [PF06058.15, score=101.1]; mRNA-decapping enzyme C-terminus [PF16741.7, score=45.8]} {Human: ENSG00000272886, DCP1A, decapping mRNA 1A, [RH, Score=111, Expect=5e-26]} {Mouse: ENSMUSG00000021962, Dcp1a, decapping mRNA 1A, [RH, Score=109, Expect=5e-26]} {Dmel: FBgn0034921, DCP1, Decapping protein 1, [RH, Score=124, Expect=8e-32]} {Celegans: WBGene00021929, dcap-1, mRNA DeCAPping enzyme, [RH, Score=75.1, Expect=7e-15]} {RNA1509_6135} {RNA1310_17346} {RNA815_2134.1} |
| 3. | MligTC455_23167 | 700 | 14.59 | Mlig455_010329 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.892 Region-enriched R5: 1.299/0.01836 |
BICD2 | 1.819 | - | - | - | 0.959 | 0.860 | - | Mlig455_010329 {REF} {Length: 4422} {Pfam: Microtubule-associated protein Bicaudal-D [PF09730.11, score=113.9]} {Human: ENSG00000185963, BICD2, BICD cargo adaptor 2, [Score=119, Expect=5e-29]; ENSG00000151746, BICD1, BICD cargo adaptor 1, [Score=116, Expect=7e-31]} {Mouse: ENSMUSG00000003452, Bicd1, BICD cargo adaptor 1, [Score=119, Expect=1e-32]; ENSMUSG00000037933, Bicd2, BICD cargo adaptor 2, [Score=118, Expect=5e-29]} {Dmel: FBgn0000183, BicD, Bicaudal D, [Score=119, Expect=1e-29]} {Celegans: WBGene00016611, bicd-1, BICaudal D (Drosophila) homolog, [Score=84.0, Expect=1e-17]} {Smed: dd_Smed_v6_758_0_1, dd_Smed_v6_758_0_1, [Score=105, Expect=7e-25]} {RNA1509_12040, RNA1509_55648} {RNA1310_24140.1, RNA1509_55648} {RNA1509_55648, RNA815_7397} |
| 4. | MligTC455_51988 | 194 | 4.05 | Mlig455_032184 | Neo: - Age: Down-Up-Down |
PLEKHG5 | 1.687 | - | - | - | 0.953 | 0.734 | - | Mlig455_032184 {REF} {Length: 3915} {Pfam: RhoGEF domain [PF00621.22, score=89.9]} {Human: ENSG00000171680, PLEKHG5, pleckstrin homology and RhoGEF domain containing G5, [RH, Score=191, Expect=4e-50]} {Mouse: ENSMUSG00000039713, Plekhg5, pleckstrin homology domain containing, family G (with RhoGef domain) member 5, [RH, Score=195, Expect=8e-52]} {Dmel: FBgn0261556, CG42674, [RH, Score=177, Expect=8e-46]} {Celegans: WBGene00006476, rhgf-2, RHGF-2; RHo Guanine nucleotide exchange Factor, [Score=106, Expect=2e-23]} {Smed: dd_Smed_v6_10072_0_1, dd_Smed_v6_10072_0_1, [RH, Score=166, Expect=3e-43]} {RNA1509_23460} {RNA1310_1988, RNA1509_23460} {RNA1509_23460, RNA815_5839} |
| 5. | MligTC455_52896 | 904 | 18.83 | Mlig455_024424, Mlig455_024578 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.512/0.00012 Regeneration-upregulated BL: 3.867 Regeneration-enriched BL: 3.867 |
BARD1 | 1.683 | - | - | - | 0.952 | 0.731 | - | Mlig455_024424 {REF} {Length: 2471} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Ankyrin repeats (many copies) [PF13637.8, score=61.6]; Ankyrin repeat [PF00023.32, score=57.6]; Ankyrin repeats (many copies) [PF13857.8, score=49.5]; Ankyrin repeat [PF13606.8, score=48.4]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=36.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=33.5]; RING-type zinc-finger [PF13445.8, score=22.2]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=214, Expect=2e-59]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=213, Expect=2e-59]} {Dmel: FBgn0036814, CG14073, [RH, Score=88.6, Expect=9e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=8e-23]} {RNA1509_6999} {RNA1310_8348} {RNA815_2740} Mlig455_024578 {REF} {Length: 2553} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.2]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF00023.32, score=57.4]; Ankyrin repeat [PF13606.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=46.6]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=39.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=32.2]; RING-type zinc-finger [PF13445.8, score=22.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.5]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=218, Expect=2e-60]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=217, Expect=2e-60]} {Dmel: FBgn0036814, CG14073, [RH, Score=89.0, Expect=8e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=7e-23]} {RNA1509_6999} {RNA1310_8348, RNA1509_6999} {RNA1509_6999, RNA815_2740} |
| 6. | MligTC455_50247 | 1392 | 29 | Mlig455_036350 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_036350 {REF} {Length: 942} {TRANSSPLICED} {RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1310_2461, RNA1509_19938, RNA1509_40907, RNA1509_55722} {RNA1509_19938, RNA1509_40907, RNA1509_55722, RNA815_24971} | |
| 7. | MligTC455_23800 | 1812 | 37.74 | Mlig455_035539 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.428 Region-enriched R5: 1.748/0.00017 |
RPA2 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_035539 {REF} {Length: 1186} {TRANSSPLICED} {Pfam: Replication protein A C terminal [PF08784.13, score=48.6]; OB-fold nucleic acid binding domain [PF01336.27, score=20.3]} {Human: ENSG00000117748, RPA2, replication protein A2, [RH, Score=141, Expect=6e-40]} {Mouse: ENSMUSG00000028884, Rpa2, replication protein A2, [RH, Score=156, Expect=7e-46]} {Dmel: FBgn0032906, RPA2, Replication protein A2, [RH, Score=77.8, Expect=1e-16]} {Celegans: WBGene00019079, rpa-4, Replication Protein A homolog, [RH, Score=57.8, Expect=2e-09]} {Smed: dd_Smed_v6_4341_0_1, dd_Smed_v6_4341_0_1, [RH, Score=82.0, Expect=2e-18]} {RNA1509_40070} {RNA1310_27117} {RNA815_4172.1} |
| 8. | MligTC455_33023 | 431 | 8.97 | Mlig455_052682 | Neo: - Age: - |
RSU1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_052682 {REF} {Length: 1870} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=67.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.3]; Leucine Rich Repeat [PF00560.35, score=26.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [Score=245, Expect=2e-80]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [Score=241, Expect=3e-79]} {Dmel: FBgn0028546, ics, icarus, [Score=226, Expect=3e-73]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [Score=221, Expect=1e-71]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [Score=243, Expect=2e-80]} {RNA1509_24872, RNA1509_31492, RNA1509_48073} {RNA1310_35307, RNA1509_24872, RNA1509_31492, RNA1509_48073} {RNA1509_24872, RNA1509_31492, RNA1509_48073, RNA815_12788.1} |
| 9. | MligTC455_44843 | 288 | 6.01 | Mlig455_019849 | Neo: Int S/G2/M Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_019849 {REF} {Length: 976} {TRANSSPLICED} {RNA1509_42237} {RNA1310_36308, RNA1509_42237} {RNA1509_42237, RNA815_17614} | |
| 10. | MligTC455_44620 | 1790 | 37.29 | Mlig455_061177 | Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R4: 1.617/0.00022 |
ECI2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_061177 {REF} {Length: 1547} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=132.9]; Acyl CoA binding protein [PF00887.21, score=88.8]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=72.8]} {Human: ENSG00000198721, ECI2, enoyl-CoA delta isomerase 2, [RH, Score=353, Expect=5e-120]} {Mouse: ENSMUSG00000021417, Eci2, enoyl-Coenzyme A delta isomerase 2, [RH, Score=352, Expect=8e-120]} {Dmel: FBgn0035169, CG13890, [RH, Score=161, Expect=7e-47]} {Celegans: WBGene00001153, ech-4, Enoyl-CoA Hydratase, [RH, Score=280, Expect=2e-91]} {Smed: dd_Smed_v6_5239_0_1, dd_Smed_v6_5239_0_1, [RH, Score=423, Expect=9e-148]} {RNA1509_3390} {RNA1310_18160} {RNA815_6994} |
| 11. | MligTC455_41343 | 2010 | 41.87 | Mlig455_013560, Mlig455_013612 | Neo: - Age: - |
NID1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_013560 {REF} {Length: 5753} {Pfam: EGF domain [PF12947.9, score=33.6]} {Human: ENSG00000116962, NID1, nidogen 1, [Score=103, Expect=3e-21]} {Mouse: ENSMUSG00000005397, Nid1, nidogen 1, [Score=108, Expect=3e-23]} {Dmel: FBgn0026403, Ndg, Nidogen/entactin, [Score=110, Expect=7e-24]} {Celegans: WBGene00003738, nid-1, NIDogen (Basement membrane protein), [Score=138, Expect=2e-32]} {Smed: dd_Smed_v6_6585_0_2, dd_Smed_v6_6585_0_2, [RH, Score=147, Expect=4e-35]} {RNA1509_4321} {RNA1310_834.1, RNA1509_4321} {RNA1509_4321, RNA815_519} Mlig455_013612 {REF} {Length: 5761} {TRANSSPLICED} {Pfam: EGF domain [PF12947.9, score=33.6]} {Human: ENSG00000116962, NID1, nidogen 1, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000005397, Nid1, nidogen 1, [Score=109, Expect=2e-23]} {Dmel: FBgn0026403, Ndg, Nidogen/entactin, [Score=110, Expect=8e-24]} {Celegans: WBGene00003738, nid-1, NIDogen (Basement membrane protein), [Score=138, Expect=2e-32]} {Smed: dd_Smed_v6_6585_0_2, dd_Smed_v6_6585_0_2, [RH, Score=144, Expect=4e-34]} {RNA1509_4321} {RNA1310_834.1} {RNA815_519} |
| 12. | MligTC455_22328 | 1046 | 21.78 | Mlig455_024145, Mlig455_024156 | Neo: - Age: - |
PTGES2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_024145 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: RNA transcription, translation and transport factor protein [PF10036.11, score=223.0]; Glutaredoxin [PF00462.26, score=43.6]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=41.9]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=30.6]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=20.7]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=20.6]} {Human: ENSG00000148334, PTGES2, prostaglandin E synthase 2, [RH, Score=214, Expect=2e-63]} {Mouse: ENSMUSG00000026820, Ptges2, prostaglandin E synthase 2, [RH, Score=213, Expect=6e-63]} {Dmel: FBgn0004465, Su(P), Suppressor of ref(2)P sterility, [RH, Score=210, Expect=9e-62]} {Celegans: WBGene00011239, pges-2, ProstaGlandin E Synthase homolog, [RH, Score=239, Expect=9e-74]} {Smed: dd_Smed_v6_6741_0_1, dd_Smed_v6_6741_0_1, [RH, Score=254, Expect=1e-79]} {RNA1509_41821} {RNA1310_20059} {RNA815_10948} Mlig455_024156 {REF} {Length: 1096} {Human: ENSG00000148334, PTGES2, prostaglandin E synthase 2, [RH, Score=130, Expect=1e-37]} {Mouse: ENSMUSG00000026820, Ptges2, prostaglandin E synthase 2, [Score=134, Expect=3e-37]} {Dmel: FBgn0004465, Su(P), Suppressor of ref(2)P sterility, [Score=131, Expect=4e-36]} {Celegans: WBGene00011239, pges-2, ProstaGlandin E Synthase homolog, [Score=156, Expect=3e-46]} {Smed: dd_Smed_v6_6741_0_1, dd_Smed_v6_6741_0_1, [Score=156, Expect=9e-47]} {RNA1509_24174} {RNA1310_20059} {RNA815_10948} |