Data search
Results for MligTC455_50290
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50290 | 5148 | 107.24 | Mlig455_045086 | Neo: - Age: logFC(26M/2M)=-0.214 |
Mlig455_045086 {REF} {Length: 989} {TRANSSPLICED} {Dmel: FBgn0031268, cold, coiled, [RH, Score=75.1, Expect=7e-18]} {Smed: dd_Smed_v6_1732_0_1, dd_Smed_v6_1732_0_1, [RH, Score=110, Expect=4e-32]} {RNA1509_52011, RNA1509_8026} {RNA1310_22077, RNA1509_52011, RNA1509_8026} {RNA1509_52011, RNA1509_8026, RNA815_3871.1} |
Cumulative graph for MligTC455_50290
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.172 | 6.768 | 0.00901 | 0.28120 | |
| RegionR2 | -0.3 | 6.768 | 0.11582 | 0.42113 | |
| RegionR3 | 0.309 | 6.768 | 0.04707 | 0.37999 | |
| RegionR4 | 0.371 | 6.768 | 0.04199 | 0.17125 | |
| RegionR5 | 0.232 | 6.768 | 0.12372 | 0.35362 | |
| RegionR6 | 0.275 | 6.768 | 0.08701 | 0.54334 | |
| RegionR7 | 0.302 | 6.768 | 0.12343 | 0.66227 | |
| RegionR8 | -0.017 | 6.768 | 0.94722 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.508 | 6.768 | 0.39678 | 1.00000 | |
| RegenerationR2 | 0.153 | 6.768 | 0.35170 | 0.78273 | |
| RegenerationR3 | -0.166 | 6.768 | 0.33906 | 0.76340 | |
| RegenerationR4 | 0.175 | 6.768 | 0.32223 | 0.76039 | |
| RegenerationR5 | 0 | 6.768 | 0.99883 | 1.00000 | |
| RegenerationR6 | 0.022 | 6.768 | 0.90216 | 1.00000 | |
| RegenerationBL | 0.212 | 6.768 | 0.26247 | 0.62083 | |
| RegenerationTP | 0.275 | 6.768 | 0.18874 | 0.62655 |
Genes with expression patterns similar to MligTC455_50290
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50290 | 5148 | 107.24 | Mlig455_045086 | Neo: - Age: logFC(26M/2M)=-0.214 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045086 {REF} {Length: 989} {TRANSSPLICED} {Dmel: FBgn0031268, cold, coiled, [RH, Score=75.1, Expect=7e-18]} {Smed: dd_Smed_v6_1732_0_1, dd_Smed_v6_1732_0_1, [RH, Score=110, Expect=4e-32]} {RNA1509_52011, RNA1509_8026} {RNA1310_22077, RNA1509_52011, RNA1509_8026} {RNA1509_52011, RNA1509_8026, RNA815_3871.1} | |
| 2. | MligTC455_19976 | 1008 | 21 | Mlig455_006463 | Neo: - Age: logFC(26M/2M)=-0.227 |
NGEF | 1.754 | - | - | - | 0.951 | - | 0.803 | Mlig455_006463 {REF} {Length: 5393} {Pfam: RhoGEF domain [PF00621.22, score=103.1]; SH3 domain [PF00018.30, score=45.6]; Variant SH3 domain [PF07653.19, score=43.7]; Variant SH3 domain [PF14604.8, score=38.2]} {Human: ENSG00000066248, NGEF, neuronal guanine nucleotide exchange factor, [RH, Score=226, Expect=3e-64]; ENSG00000130762, ARHGEF16, Rho guanine nucleotide exchange factor 16, [RH, Score=224, Expect=1e-62]; ENSG00000114790, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=218, Expect=9e-60]; ENSG00000277101, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=218, Expect=9e-60]} {Mouse: ENSMUSG00000026259, Ngef, neuronal guanine nucleotide exchange factor, [RH, Score=231, Expect=2e-65]} {Dmel: FBgn0261547, Exn, Ephexin, [RH, Score=214, Expect=2e-58]} {Celegans: WBGene00019487, ephx-1, EPHeXin (Eph-interacting GEF) homolog, [Score=215, Expect=2e-60]} {Smed: dd_Smed_v6_1847_0_10, dd_Smed_v6_1847_0_10, [RH, Score=184, Expect=3e-49]} {RNA1509_5926} {RNA1310_1816.1} {RNA815_898.1} |
| 3. | MligTC455_29016 | 36522 | 760.88 | Mlig455_005202 | Neo: - Age: - Regeneration-enriched R1: 3.026 |
1.666 | - | - | - | 0.951 | - | 0.715 | Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
| 4. | MligTC455_44942 | 226 | 4.7 | Mlig455_004098 | Neo: - Age: - |
PIGA | 0.976 | - | - | - | 0.976 | - | - | Mlig455_004098 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: PIGA (GPI anchor biosynthesis) [PF08288.14, score=136.1]; Glycosyltransferase Family 4 [PF13439.8, score=107.1]; Glycosyl transferases group 1 [PF00534.22, score=89.4]; Glycosyl transferases group 1 [PF13692.8, score=83.9]; Glycosyl transferase 4-like domain [PF13579.8, score=56.2]} {Human: ENSG00000165195, PIGA, phosphatidylinositol glycan anchor biosynthesis class A, [RH, Score=470, Expect=1e-163]} {Mouse: ENSMUSG00000031381, Piga, phosphatidylinositol glycan anchor biosynthesis, class A, [RH, Score=475, Expect=1e-165]} {Dmel: FBgn0034270, PIG-A, Phosphatidylinositol glycan anchor biosynthesis class A, [RH, Score=383, Expect=1e-129]} {Celegans: WBGene00008431, piga-1, PhosphatidylInositol-Glycan biosynthesis class A protein, [RH, Score=401, Expect=2e-137]} {Smed: dd_Smed_v6_5918_0_1, dd_Smed_v6_5918_0_1, [RH, Score=430, Expect=1e-148]} {RNA1509_59793} {RNA1310_21220.1} {RNA815_5464} |
| 5. | MligTC455_16807 | 627 | 13.07 | Mlig455_064067, Mlig455_064997 | Neo: - Age: - |
TRAF7 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_064067 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=50.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=26.3]} {Human: ENSG00000131653, TRAF7, TNF receptor associated factor 7, [Score=224, Expect=1e-64]} {Mouse: ENSMUSG00000052752, Traf7, TNF receptor-associated factor 7, [Score=222, Expect=2e-64]} {Dmel: FBgn0041171, ago, archipelago, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_7882_0_1, dd_Smed_v6_7882_0_1, [Score=164, Expect=3e-44]} {RNA1509_39146} {RNA1310_8298.2} {RNA815_8655} Mlig455_064997 {REF} {Length: 2598} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=81.4]; zinc finger of C3HC4-type, RING [PF15227.8, score=26.1]} {Human: ENSG00000131653, TRAF7, TNF receptor associated factor 7, [RH, Score=288, Expect=1e-87]} {Mouse: ENSMUSG00000052752, Traf7, TNF receptor-associated factor 7, [RH, Score=287, Expect=4e-88]} {Dmel: FBgn0041171, ago, archipelago, [Score=95.1, Expect=6e-20]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_7882_0_1, dd_Smed_v6_7882_0_1, [RH, Score=228, Expect=5e-67]} {RNA1509_53263} {RNA1310_8298.2} {RNA815_12519} |
| 6. | MligTC455_49267 | 1108 | 23.08 | Mlig455_014279, Mlig455_014314, Mlig455_014331 | Neo: - Age: Down-Up-Up Region-enriched R7: 1.758/0.00078 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_014279 {REF} {Length: 976} {RNA1509_49320} {RNA1310_72049} {RNA815_23076} Mlig455_014314 {REF} {Length: 976} {RNA1509_49320} {RNA1310_72049} {RNA815_23076} Mlig455_014331 {REF} {Length: 998} {RNA1509_49320} {RNA1310_72049, RNA1509_49320} {RNA1509_49320, RNA815_23076} |
|
| 7. | MligTC455_18297 | 738 | 15.38 | Mlig455_057593 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_057593 {REF} {Length: 948} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=36.5]} {RNA1509_13142, RNA1509_59779} {RNA1310_45231, RNA1509_13142, RNA1509_59779} {RNA1509_13142, RNA1509_59779, RNA815_64661} | |
| 8. | MligTC455_23760 | 1776 | 37 | Mlig455_070910 | Neo: - |
CNN3 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_070910 {REF} {Length: 2340} {Pfam: Calponin family repeat [PF00402.20, score=183.7]; Calponin homology (CH) domain [PF00307.33, score=70.1]} {Human: ENSG00000117519, CNN3, calponin 3, [RH, Score=149, Expect=2e-41]; ENSG00000064666, CNN2, calponin 2, [RH, Score=149, Expect=9e-42]} {Mouse: ENSMUSG00000004665, Cnn2, calponin 2, [RH, Score=154, Expect=7e-44]; ENSMUSG00000053931, Cnn3, calponin 3, acidic, [RH, Score=147, Expect=9e-41]} {Dmel: FBgn0035499, Chd64, [Score=119, Expect=6e-32]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=94.4, Expect=8e-23]} {Smed: dd_Smed_v6_333_0_1, dd_Smed_v6_333_0_1, [RH, Score=436, Expect=2e-153]} {RNA1509_2360} {RNA1310_23676} {RNA815_3937.2} |
| 9. | MligTC455_33195 | 836 | 17.42 | Mlig455_000057, Mlig455_063727 | Neo: - Age: logFC(26M/2M)=0.406 |
FIP1L1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_000057 {REF} {Length: 2122} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=71.4]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=94.4, Expect=7e-20]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=92.4, Expect=2e-19]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=90.9, Expect=8e-19]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=114, Expect=4e-27]} {RNA1509_14985, RNA1509_48324} {RNA1310_12515, RNA1509_48324} {RNA1509_48324, RNA815_32908} Mlig455_063727 {REF} {Length: 3480} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=72.1]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=88.6, Expect=5e-18]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=89.4, Expect=3e-18]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=89.7, Expect=2e-18]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=111, Expect=4e-26]} {RNA1509_14985} {RNA1310_12515, RNA1509_14985} {RNA1509_14985, RNA815_32908} |
| 10. | MligTC455_28296 | 28005 | 583.44 | Mlig455_034885 | Neo: - Age: - Region-enriched R4: 1.466/0.03430 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_034885 {REF} {Length: 23} {TRANSSPLICED} {NoTransDecoderORF} | |
| 11. | MligTC455_29024 | 2325 | 48.43 | Mlig455_051078 | Neo: Irradiation Age: Up-Down-Down |
0.95 | - | - | - | 0.950 | - | - | Mlig455_051078 {REF} {Length: 906} {RNA1509_5369} {RNA1310_10116.1} {RNA815_54294} | |
| 12. | MligTC455_44594 | 694 | 14.45 | Mlig455_002373 | Neo: - Age: Down-Up-Down |
SOX21 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_002373 {REF} {Length: 2315} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=89.4]; HMG-box domain [PF09011.12, score=40.9]} {Human: ENSG00000125285, SOX21, SRY-box 21, [Score=108, Expect=4e-27]; ENSG00000181449, SOX2, SRY-box 2, [Score=108, Expect=5e-27]; ENSG00000168875, SOX14, SRY-box 14, [Score=108, Expect=2e-27]; ENSG00000182968, SOX1, SRY-box 1, [Score=107, Expect=6e-26]; ENSG00000134595, SOX3, SRY-box 3, [Score=106, Expect=2e-25]; ENSG00000005513, SOX8, SRY-box 8, [Score=106, Expect=2e-25]} {Mouse: ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=108, Expect=1e-27]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=108, Expect=3e-27]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=108, Expect=3e-27]; ENSMUSG00000024176, Sox8, SRY (sex determining region Y)-box 8, [Score=107, Expect=6e-26]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=107, Expect=5e-26]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=106, Expect=1e-25]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=104, Expect=2e-26]} {Dmel: FBgn0000411, D, dachs, [Score=115, Expect=3e-29]} {Celegans: WBGene00015716, sox-4, SOX (Mammalian SRY box) family, [RH, Score=106, Expect=2e-27]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=111, Expect=2e-27]} {RNA1509_37296} {RNA1310_8726.1} {RNA815_5231} |
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