Data search
Results for MligTC455_23760
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23760 | 1776 | 37.00 | Mlig455_070910 | Neo: - |
CNN3 | Mlig455_070910 {REF} {Length: 2340} {Pfam: Calponin family repeat [PF00402.20, score=183.7]; Calponin homology (CH) domain [PF00307.33, score=70.1]} {Human: ENSG00000117519, CNN3, calponin 3, [RH, Score=149, Expect=2e-41]; ENSG00000064666, CNN2, calponin 2, [RH, Score=149, Expect=9e-42]} {Mouse: ENSMUSG00000004665, Cnn2, calponin 2, [RH, Score=154, Expect=7e-44]; ENSMUSG00000053931, Cnn3, calponin 3, acidic, [RH, Score=147, Expect=9e-41]} {Dmel: FBgn0035499, Chd64, [Score=119, Expect=6e-32]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=94.4, Expect=8e-23]} {Smed: dd_Smed_v6_333_0_1, dd_Smed_v6_333_0_1, [RH, Score=436, Expect=2e-153]} {RNA1509_2360} {RNA1310_23676} {RNA815_3937.2} |
Cumulative graph for MligTC455_23760
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.668 | 5.281 | 0.44300 | 1.00000 | |
| RegionR2 | 0.295 | 5.281 | 0.53702 | 0.90641 | |
| RegionR3 | 0.214 | 5.281 | 0.59350 | 1.00000 | |
| RegionR4 | -0.552 | 5.281 | 0.27161 | 0.57731 | |
| RegionR5 | -0.886 | 5.281 | 0.03592 | 0.14742 | |
| RegionR6 | 0.646 | 5.281 | 0.10564 | 0.59578 | |
| RegionR7 | 0.458 | 5.281 | 0.29380 | 0.92828 | |
| RegionR8 | 0.493 | 5.281 | 0.30943 | 0.94182 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.099 | 5.281 | 0.93322 | 1.00000 | |
| RegenerationR2 | -0.386 | 5.281 | 0.44160 | 0.84102 | |
| RegenerationR3 | -0.331 | 5.281 | 0.52387 | 0.86868 | |
| RegenerationR4 | 0.234 | 5.281 | 0.66998 | 0.94252 | |
| RegenerationR5 | 0.469 | 5.281 | 0.36341 | 0.77411 | |
| RegenerationR6 | -0.771 | 5.281 | 0.13295 | 0.44757 | |
| RegenerationBL | 0.033 | 5.281 | 0.94569 | 1.00000 | |
| RegenerationTP | -0.13 | 5.281 | 0.80097 | 1.00000 |
Genes with expression patterns similar to MligTC455_23760
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23760 | 1776 | 37 | Mlig455_070910 | Neo: - |
CNN3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070910 {REF} {Length: 2340} {Pfam: Calponin family repeat [PF00402.20, score=183.7]; Calponin homology (CH) domain [PF00307.33, score=70.1]} {Human: ENSG00000117519, CNN3, calponin 3, [RH, Score=149, Expect=2e-41]; ENSG00000064666, CNN2, calponin 2, [RH, Score=149, Expect=9e-42]} {Mouse: ENSMUSG00000004665, Cnn2, calponin 2, [RH, Score=154, Expect=7e-44]; ENSMUSG00000053931, Cnn3, calponin 3, acidic, [RH, Score=147, Expect=9e-41]} {Dmel: FBgn0035499, Chd64, [Score=119, Expect=6e-32]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=94.4, Expect=8e-23]} {Smed: dd_Smed_v6_333_0_1, dd_Smed_v6_333_0_1, [RH, Score=436, Expect=2e-153]} {RNA1509_2360} {RNA1310_23676} {RNA815_3937.2} |
| 2. | MligTC455_48200 | 5445 | 113.43 | Mlig455_036804, Mlig455_052940, Mlig455_053010 | Neo: - Age: - |
1.726 | - | - | - | 0.965 | - | 0.761 | Mlig455_036804 {REF} {Length: 2320} {RNA1509_3788} {RNA1310_16652, RNA1509_3788} {RNA1509_3788, RNA815_6668} Mlig455_052940 {REF} {Length: 1832} {RNA1509_3788} {RNA1310_16652} {RNA815_6668} Mlig455_053010 {REF} {Length: 1919} {RNA1509_3788} {RNA1310_16652} {RNA815_6668} |
|
| 3. | MligTC455_16354 | 819 | 17.05 | Mlig455_046738, Mlig455_046828 | Neo: Irradiation Age: Up-Down-Down Regeneration-downregulated TP: -2.365 Regeneration-depleted TP: -2.365 |
RPS6KA1 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_046738 {REF} {Length: 889} {Pfam: Protein kinase domain [PF00069.27, score=58.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=30.0]} {Human: ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=168, Expect=9e-49]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=167, Expect=3e-48]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=166, Expect=6e-48]} {Mouse: ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=170, Expect=1e-49]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=167, Expect=2e-48]; ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=166, Expect=5e-48]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]} {Dmel: FBgn0262866, S6kII, Ribosomal protein S6 kinase II, [Score=156, Expect=2e-44]} {Celegans: WBGene00011352, rskn-1, Putative ribosomal protein S6 kinase alpha-1, [Score=170, Expect=7e-50]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=154, Expect=3e-44]} {RNA1509_13802} {RNA1310_6706.1} {RNA815_5503} Mlig455_046828 {REF} {Length: 9072} {RNA1509_13802, RNA1509_34330} {RNA1310_6706.1, RNA1509_13802, RNA1509_34330} {RNA1509_13802, RNA1509_34330, RNA815_5503} |
| 4. | MligTC455_39060 | 962 | 20.05 | Mlig455_034536, Mlig455_070441 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.435 Region-enriched R5: 1.668/0.00004 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_034536 {REF} {Length: 2890} {Smed: dd_Smed_v6_10049_0_1, dd_Smed_v6_10049_0_1, [RH, Score=130, Expect=3e-32]} {RNA1509_7991} {RNA1310_1271.1} {RNA815_16754} Mlig455_070441 {REF} {Length: 2941} {Smed: dd_Smed_v6_10049_0_1, dd_Smed_v6_10049_0_1, [RH, Score=129, Expect=4e-32]} {RNA1509_7991} {RNA1310_1271.1, RNA1509_7991} {RNA1509_7991, RNA815_16754} |
|
| 5. | MligTC455_46082 | 2016 | 41.99 | Mlig455_032092 | Neo: - Age: Down-Up-Up |
MVP | 0.96 | - | - | - | - | 0.960 | - | Mlig455_032092 {REF} {Length: 3806} {Pfam: Major Vault Protein repeat domain [PF01505.20, score=216.1]; Shoulder domain [PF11978.10, score=163.9]; Major Vault Protein repeat domain [PF17794.3, score=121.3]; Major Vault Protein Repeat domain [PF17795.3, score=116.0]; Major Vault Protein repeat domain [PF17796.3, score=101.2]} {Human: ENSG00000013364, MVP, major vault protein, [RH, Score=1073, Expect=0.0]} {Mouse: ENSMUSG00000030681, Mvp, major vault protein, [RH, Score=1067, Expect=0.0]} {Smed: dd_Smed_v6_1098_0_1, dd_Smed_v6_1098_0_1, [Score=1073, Expect=0.0]} {RNA1509_12771, RNA1509_6349} {RNA1310_3408.1, RNA1509_12771} {RNA1509_12771, RNA815_968.1} |
| 6. | MligTC455_36317 | 545 | 11.35 | Mlig455_025049 | Neo: - Age: - |
GLB1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_025049 {REF} {Length: 2498} {Pfam: Glycosyl hydrolases family 35 [PF01301.21, score=364.2]; Beta-galactosidase [PF02449.17, score=40.5]; Beta-galactosidase jelly roll domain [PF13364.8, score=31.4]} {Human: ENSG00000170266, GLB1, galactosidase beta 1, [RH, Score=482, Expect=1e-161]} {Mouse: ENSMUSG00000045594, Glb1, galactosidase, beta 1, [RH, Score=491, Expect=1e-165]} {Dmel: FBgn0001089, Gal, beta galactosidase, [RH, Score=412, Expect=7e-135]} {Celegans: WBGene00011832, bgal-1, Beta-galactosidase, [RH, Score=384, Expect=1e-124]} {Smed: dd_Smed_v6_4056_0_1, dd_Smed_v6_4056_0_1, [RH, Score=514, Expect=4e-175]} {RNA1509_37267} {RNA1310_9080.2, RNA1509_37267} {RNA1509_37267, RNA815_6506} |
| 7. | MligTC455_49267 | 1108 | 23.08 | Mlig455_014279, Mlig455_014314, Mlig455_014331 | Neo: - Age: Down-Up-Up Region-enriched R7: 1.758/0.00078 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_014279 {REF} {Length: 976} {RNA1509_49320} {RNA1310_72049} {RNA815_23076} Mlig455_014314 {REF} {Length: 976} {RNA1509_49320} {RNA1310_72049} {RNA815_23076} Mlig455_014331 {REF} {Length: 998} {RNA1509_49320} {RNA1310_72049, RNA1509_49320} {RNA1509_49320, RNA815_23076} |
|
| 8. | MligTC455_50290 | 5148 | 107.24 | Mlig455_045086 | Neo: - Age: logFC(26M/2M)=-0.214 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_045086 {REF} {Length: 989} {TRANSSPLICED} {Dmel: FBgn0031268, cold, coiled, [RH, Score=75.1, Expect=7e-18]} {Smed: dd_Smed_v6_1732_0_1, dd_Smed_v6_1732_0_1, [RH, Score=110, Expect=4e-32]} {RNA1509_52011, RNA1509_8026} {RNA1310_22077, RNA1509_52011, RNA1509_8026} {RNA1509_52011, RNA1509_8026, RNA815_3871.1} | |
| 9. | MligTC455_18297 | 738 | 15.38 | Mlig455_057593 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_057593 {REF} {Length: 948} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=36.5]} {RNA1509_13142, RNA1509_59779} {RNA1310_45231, RNA1509_13142, RNA1509_59779} {RNA1509_13142, RNA1509_59779, RNA815_64661} | |
| 10. | MligTC455_27542 | 1306 | 27.21 | Mlig455_010204 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_010204 {REF} {Length: 2252} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=31.0]} {RNA1509_17512} {RNA1310_16470.1} {RNA815_4608.1} | |
| 11. | MligTC455_52607 | 707 | 14.73 | Mlig455_065500 | Neo: - Age: Up-Up-Down |
OSBPL10 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_065500 {REF} {Length: 3443} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=255.7]; PH domain [PF00169.31, score=39.2]; Pleckstrin homology domain [PF15409.8, score=35.5]} {Human: ENSG00000144645, OSBPL10, oxysterol binding protein like 10, [RH, Score=483, Expect=1e-159]} {Mouse: ENSMUSG00000040875, Osbpl10, oxysterol binding protein-like 10, [RH, Score=477, Expect=2e-157]} {Dmel: FBgn0033463, CG1513, [Score=332, Expect=2e-105]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [Score=301, Expect=8e-95]} {Smed: dd_Smed_v6_7299_0_1, dd_Smed_v6_7299_0_1, [RH, Score=391, Expect=1e-124]} {RNA1509_36941} {RNA1310_1795.1} {RNA815_1100.1} |