TomoSeq data search

Data search

Results for MligTC455_50315

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50315

148

3.08

Mlig455_039139

Neo: -

Age: -

Region-enriched R4: 3.129/0.02095

Mlig455_039139 {REF} {Length: 1556} {RNA1509_19772} {RNA1310_39074} {RNA815_16126.1}

Cumulative graph for MligTC455_50315

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.356	2.411	0.40277	1.00000
RegionR2	-0.082	2.411	0.98770	1.00000
RegionR3	0.855	2.411	0.29826	0.84087
RegionR4	3.129	2.411	0.00246	0.02095
RegionR5	0.958	2.411	0.25603	0.57445
RegionR6	0.756	2.411	0.38601	0.96301
RegionR7	-1.818	2.411	0.49609	1.00000
RegionR8	-0.443	2.411	0.83474	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.913	2.411	0.86518	1.00000
RegenerationR2	-0.066	2.411	0.91095	1.00000
RegenerationR3	-0.558	2.411	0.41617	0.81262
RegenerationR4	-0.969	2.411	0.22981	0.67918
RegenerationR5	-0.803	2.411	0.26708	0.69853
RegenerationR6	-0.426	2.411	0.56966	0.85136
RegenerationBL	-0.253	2.411	0.83518	1.00000
RegenerationTP	0.827	2.411	0.47958	0.88761

Genes with expression patterns similar to MligTC455_50315

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50315	148	3.08	Mlig455_039139	Neo: - Age: - Region-enriched R4: 3.129/0.02095		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039139 {REF} {Length: 1556} {RNA1509_19772} {RNA1310_39074} {RNA815_16126.1}
2.	MligTC455_39794	787	16.39	Mlig455_051184	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.481		2.526	-	-	-	0.703	0.956	0.867	Mlig455_051184 {REF} {Length: 1501} {TRANSSPLICED} {Smed: dd_Smed_v6_2398_0_1, dd_Smed_v6_2398_0_1, [RH, Score=167, Expect=1e-50]} {RNA1509_25151} {RNA1310_14303.1} {RNA815_5283}
3.	MligTC455_26815	337	7.03	Mlig455_006254, Mlig455_048777	Neo: - Age: -		1.701	-	-	-	-	0.953	0.748	Mlig455_006254 {REF} {Length: 1934} {RNA1509_8366} {RNA1310_70170} {RNA815_10373} Mlig455_048777 {REF} {Length: 4020} {RNA1509_48783} {RNA1310_45647} {RNA815_47705}
4.	MligTC455_50603	1962	40.88	Mlig455_004163	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.601	KLF1	1.66	-	-	0.709	-	0.951	-	Mlig455_004163 {REF} {Length: 1380} {Pfam: Zinc-finger double domain [PF13465.8, score=38.4]; Zinc finger, C2H2 type [PF00096.28, score=37.1]; C2H2-type zinc ribbon [PF15909.7, score=27.5]; C2H2-type zinc finger [PF13894.8, score=23.7]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=125, Expect=2e-33]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=123, Expect=4e-33]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=120, Expect=3e-33]; ENSMUSG00000025959, Klf7, Kruppel-like factor 7 (ubiquitous), [Score=119, Expect=6e-32]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=119, Expect=8e-32]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=119, Expect=4e-31]} {Dmel: FBgn0261705, CG42741, [Score=120, Expect=4e-32]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=115, Expect=8e-32]} {RNA1509_15597} {RNA1310_30263} {RNA815_14612}
5.	MligTC455_28894	69	1.44	Mlig455_012699, Mlig455_033012	Neo: - Age: -	NPEPL1	0.974	-	-	-	-	0.974	-	Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168} Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}
6.	MligTC455_12970	132	2.76	Mlig455_022445	Neo: - Age: logFC(26M/2M)=-1.642		0.972	-	-	-	-	0.972	-	Mlig455_022445 {REF} {Length: 1567} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=21.7]} {RNA1509_43359} {RNA1310_32360, RNA1509_43359} {RNA1509_43359, RNA815_34556}
7.	MligTC455_30276	75	1.56	Mlig455_000280	Neo: - Age: -	PACS2	0.972	-	-	-	-	0.972	-	Mlig455_000280 {REF} {Length: 4016} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=64.7, Expect=2e-10]; ENSG00000175115, PACS1, phosphofurin acidic cluster sorting protein 1, [Score=64.7, Expect=2e-10]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=66.6, Expect=3e-11]; ENSMUSG00000024855, Pacs1, phosphofurin acidic cluster sorting protein 1, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=50.4, Expect=2e-06]} {Celegans: WBGene00044077, tag-232, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=57.4, Expect=1e-08]} {RNA1509_12647} {RNA1310_554.1} {RNA815_3500.1}
8.	MligTC455_38595	3288	68.49	Mlig455_010873	Neo: - Age: Down-Up-Up		0.969	-	-	-	-	0.969	-	Mlig455_010873 {REF} {Length: 1973} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.0]} {RNA1509_19874, RNA1509_50086} {RNA1310_24247.2, RNA1509_19874, RNA1509_50086} {RNA1509_19874, RNA1509_50086, RNA815_10484}
9.	MligTC455_46216	1117	23.28	Mlig455_057440	Neo: - Age: - Region-enriched R7: 2.350/0.00017 Region-enriched R8: 2.312/0.00270	RBPMS2	0.962	-	-	-	-	0.962	-	Mlig455_057440 {REF} {Length: 4543} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=164, Expect=7e-46]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [Score=124, Expect=4e-33]} {Smed: dd_Smed_v6_4296_0_4, dd_Smed_v6_4296_0_4, [Score=150, Expect=3e-43]} {RNA1509_30119} {RNA1310_16586.1} {RNA815_23894}
10.	MligTC455_11137	65	1.36	Mlig455_007742	Neo: - Age: -	FAT1	0.959	-	-	0.959	-	-	-	Mlig455_007742 {REF} {Length: 4301} {Pfam: Cadherin domain [PF00028.19, score=102.1]; EGF-like domain [PF00008.29, score=51.2]; Calcium-binding EGF domain [PF07645.17, score=33.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=207, Expect=2e-53]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=212, Expect=5e-55]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=210, Expect=2e-54]} {Dmel: FBgn0261574, kug, kugelei, [Score=155, Expect=9e-38]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=161, Expect=1e-39]} {RNA1509_55673} {RNA1310_45646} {RNA815_38697}
11.	MligTC455_27809	88	1.82	Mlig455_071155	Neo: - Age: -	RTL1	0.957	-	-	-	-	0.957	-	Mlig455_071155 {REF} {Length: 7128} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.8]; Integrase zinc binding domain [PF17921.3, score=65.6]; Integrase core domain [PF00665.28, score=61.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=87.8, Expect=4e-17]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=303, Expect=5e-89]} {RNA1509_8253} {RNA1310_683.1} {RNA815_1542.1}
12.	MligTC455_34683	219	4.57	Mlig455_038798	Neo: - Age: -	TRIM59	0.957	-	-	-	-	-	0.957	Mlig455_038798 {REF} {Length: 3899} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=30.9]; RING-type zinc-finger [PF13445.8, score=29.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.3]; Ring finger domain [PF13639.8, score=25.6]; Prokaryotic RING finger family 4 [PF14447.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.0]; zinc-RING finger domain [PF14634.8, score=20.6]} {Human: ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=51.6, Expect=6e-07]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_2039_0_1, dd_Smed_v6_2039_0_1, [Score=136, Expect=4e-34]} {RNA1509_31158, RNA1509_38012} {RNA1310_3671, RNA1509_31158, RNA1509_38012} {RNA1509_31158, RNA1509_38012, RNA815_10274}
13.	MligTC455_14049	376	7.83	Mlig455_049671	Neo: - Age: -		0.956	0.956	-	-	-	-	-	Mlig455_049671 {REF} {Length: 2740} {Pfam: Ubiquitin family [PF00240.25, score=51.7]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=26.9]} {RNA1509_11983} {RNA1310_7335} {RNA815_858}

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