TomoSeq data search

Data search

Results for MligTC455_28894

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28894

69

1.44

Mlig455_012699, Mlig455_033012

Neo: -

Age: -

NPEPL1

Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}

Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}

Cumulative graph for MligTC455_28894

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.061	1.45	0.46547	1.00000
RegionR2	0.053	1.45	0.85996	1.00000
RegionR3	1.692	1.45	0.11527	0.59003
RegionR4	-0.971	1.45	0.98916	1.00000
RegionR5	-0.793	1.45	0.98445	1.00000
RegionR6	-0.278	1.45	0.93271	1.00000
RegionR7	3.006	1.45	0.00658	0.13268
RegionR8	1.351	1.45	0.44331	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.892	1.45	0.99990	1.00000
RegenerationR2	0.17	1.45	0.88477	1.00000
RegenerationR3	-1.243	1.45	0.21909	0.65535
RegenerationR4	0.65	1.45	0.58460	0.90696
RegenerationR5	-1.657	1.45	0.21627	0.65095
RegenerationR6	-1.069	1.45	0.42899	0.75746
RegenerationBL	-0.913	1.45	0.46049	0.82779
RegenerationTP	-1.456	1.45	0.27938	0.72674

Genes with expression patterns similar to MligTC455_28894

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28894	69	1.44	Mlig455_012699, Mlig455_033012	Neo: - Age: -	NPEPL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168} Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}
2.	MligTC455_13571	22	0.46	Mlig455_017396	Neo: - Age: -		0.985	-	-	-	0.985	-	-	Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
3.	MligTC455_46216	1117	23.28	Mlig455_057440	Neo: - Age: - Region-enriched R7: 2.350/0.00017 Region-enriched R8: 2.312/0.00270	RBPMS2	0.982	-	-	-	-	0.982	-	Mlig455_057440 {REF} {Length: 4543} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=164, Expect=7e-46]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [Score=124, Expect=4e-33]} {Smed: dd_Smed_v6_4296_0_4, dd_Smed_v6_4296_0_4, [Score=150, Expect=3e-43]} {RNA1509_30119} {RNA1310_16586.1} {RNA815_23894}
4.	MligTC455_25883	68	1.41	Mlig455_005924	Neo: - Age: Down-Up-Down	NCALD	0.976	-	-	-	-	-	0.976	Mlig455_005924 {REF} {Length: 2379} {Pfam: Leucine rich repeat [PF13855.8, score=90.9]; EF-hand domain pair [PF13499.8, score=77.3]; EF hand [PF00036.34, score=73.6]; EF-hand domain [PF13405.8, score=62.8]; EF hand [PF13202.8, score=58.4]; EF-hand domain pair [PF13833.8, score=52.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=43.1]; Leucine-rich repeat [PF14580.8, score=27.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=18.6]} {Human: ENSG00000104490, NCALD, neurocalcin delta, [Score=201, Expect=8e-61]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=191, Expect=6e-57]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=201, Expect=6e-61]} {Dmel: FBgn0036926, CG7646, [RH, Score=229, Expect=1e-71]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [RH, Score=252, Expect=9e-81]} {Smed: dd_Smed_v6_6534_0_2, dd_Smed_v6_6534_0_2, [RH, Score=369, Expect=4e-126]} {RNA1509_48802} {RNA1310_15547} {RNA815_13223.1}
5.	MligTC455_50315	148	3.08	Mlig455_039139	Neo: - Age: - Region-enriched R4: 3.129/0.02095		0.974	-	-	-	-	0.974	-	Mlig455_039139 {REF} {Length: 1556} {RNA1509_19772} {RNA1310_39074} {RNA815_16126.1}
6.	MligTC455_43751	317	6.61	Mlig455_018062	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_018062 {REF} {Length: 2519} {RNA1509_20267, RNA1509_24151} {RNA1310_4680, RNA1509_20267, RNA1509_24151} {RNA1509_20267, RNA1509_24151, RNA815_3273}
7.	MligTC455_28667	18327	381.8	Mlig455_043198	Neo: - Age: Down-Up-Down Region-enriched R2: 1.210/0.02765		0.97	-	-	-	-	0.970	-	Mlig455_043198 {REF} {Length: 676} {RNA1509_14547, RNA1509_1677, RNA1509_6661, RNA1509_7499} {RNA1310_75726.1, RNA1509_14547, RNA1509_1677, RNA1509_6661, RNA1509_7499} {RNA1509_14547, RNA1509_1677, RNA1509_6661, RNA1509_7499, RNA815_26455.2}
8.	MligTC455_03236	61	1.26	Mlig455_038880	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_038880 {REF} {Length: 845} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=21.6]} {RNA1509_23775} {RNA1310_90963} {RNA815_27579}
9.	MligTC455_13572	23	0.47	Mlig455_017474	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
10.	MligTC455_38595	3288	68.49	Mlig455_010873	Neo: - Age: Down-Up-Up		0.962	-	-	-	-	0.962	-	Mlig455_010873 {REF} {Length: 1973} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.0]} {RNA1509_19874, RNA1509_50086} {RNA1310_24247.2, RNA1509_19874, RNA1509_50086} {RNA1509_19874, RNA1509_50086, RNA815_10484}
11.	MligTC455_08218	6	0.12	Mlig455_001561	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_001561 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF}
12.	MligTC455_12970	132	2.76	Mlig455_022445	Neo: - Age: logFC(26M/2M)=-1.642		0.954	-	-	-	-	0.954	-	Mlig455_022445 {REF} {Length: 1567} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=21.7]} {RNA1509_43359} {RNA1310_32360, RNA1509_43359} {RNA1509_43359, RNA815_34556}
13.	MligTC455_25567	31	0.65	Mlig455_003495, Mlig455_015560, Mlig455_037973	Neo: - Age: -	GLRA4	0.954	-	-	-	-	0.954	-	Mlig455_003495 {REF} {Length: 2067} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431} Mlig455_015560 {REF} {Length: 1799} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431} Mlig455_037973 {REF} {Length: 1670} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=20.4]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.5, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.5, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_2, dd_Smed_v6_14925_0_2, [Score=554, Expect=0.0]} {RNA1310_35073.2} {RNA815_40431}
14.	MligTC455_27967	43	0.9	Mlig455_037154	Neo: - Age: -	SON	0.954	-	-	-	-	0.954	-	Mlig455_037154 {REF} {Length: 2192} {Pfam: Lipoprotein [PF01441.21, score=59.7]} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=79.7, Expect=2e-15]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=79.0, Expect=2e-15]} {RNA1509_35809} {RNA1310_10774} {RNA815_39659}
15.	MligTC455_09070	40	0.83	Mlig455_054261	Neo: - Age: logFC(26M/2M)=-1.099	ABCG2	0.952	-	-	-	-	-	0.952	Mlig455_054261 {REF} {Length: 2386} {Pfam: ABC transporter [PF00005.29, score=94.1]; ABC-2 type transporter [PF01061.26, score=66.5]; ABC-2 type transporter [PF19055.2, score=53.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=29.4]; AAA domain [PF13401.8, score=19.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=18.6]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=202, Expect=5e-56]; ENSG00000143921, ABCG8, ATP binding cassette subfamily G member 8, [Score=200, Expect=5e-55]} {Mouse: ENSMUSG00000024254, Abcg8, ATP binding cassette subfamily G member 8, [Score=200, Expect=3e-55]; ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=200, Expect=3e-55]} {Dmel: FBgn0003996, w, white, [Score=226, Expect=9e-65]} {Celegans: WBGene00008950, wht-5, WHiTe (Drosophila) related ABC transporter, [RH, Score=231, Expect=2e-66]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [Score=193, Expect=5e-53]} {RNA1509_27156} {RNA1310_7789, RNA1509_27156} {RNA1509_27156, RNA815_12366}
16.	MligTC455_34867	862	17.95	Mlig455_005634	Neo: - Age: -	CALM2	0.952	-	-	-	-	0.952	-	Mlig455_005634 {REF} {Length: 1515} {Pfam: EF hand [PF00036.34, score=124.8]; EF-hand domain pair [PF13499.8, score=117.9]; EF hand [PF13202.8, score=101.9]; EF-hand domain [PF13405.8, score=99.9]; EF-hand domain pair [PF13833.8, score=77.4]; Dockerin type I domain [PF00404.20, score=45.3]; EF-hand domain [PF14658.8, score=41.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.8]; EF-hand domain [PF08976.13, score=24.8]; Family of unknown function (DUF5580) [PF17743.3, score=19.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=7e-43]; ENSG00000160014, CALM3, calmodulin 3, [Score=140, Expect=7e-43]; ENSG00000198668, CALM1, calmodulin 1, [Score=140, Expect=7e-43]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=140, Expect=5e-43]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=140, Expect=5e-43]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=140, Expect=5e-43]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=134, Expect=7e-41]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=6e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=138, Expect=1e-42]} {RNA1509_40867} {RNA1310_49287} {RNA815_17221.2}
17.	MligTC455_30276	75	1.56	Mlig455_000280	Neo: - Age: -	PACS2	0.951	-	-	-	-	0.951	-	Mlig455_000280 {REF} {Length: 4016} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=64.7, Expect=2e-10]; ENSG00000175115, PACS1, phosphofurin acidic cluster sorting protein 1, [Score=64.7, Expect=2e-10]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=66.6, Expect=3e-11]; ENSMUSG00000024855, Pacs1, phosphofurin acidic cluster sorting protein 1, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=50.4, Expect=2e-06]} {Celegans: WBGene00044077, tag-232, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=57.4, Expect=1e-08]} {RNA1509_12647} {RNA1310_554.1} {RNA815_3500.1}
18.	MligTC455_27067	130	2.7	Mlig455_009534	Neo: - Age: - Regeneration-upregulated BL: 5.799 Regeneration-enriched BL: 5.799		0.95	-	-	-	-	0.950	-	Mlig455_009534 {REF} {Length: 1118} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}

Berezikov Lab - 2020-2021 © ERIBA