Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_50426 | 365 | 7.61 | Mlig455_027787 | Neo: - Age: - |
FLAD1 | Mlig455_027787 {REF} {Length: 2692} {TRANSSPLICED} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=111.3]; Phosphoadenosine phosphosulfate reductase family [PF01507.21, score=29.4]} {Human: ENSG00000160688, FLAD1, flavin adenine dinucleotide synthetase 1, [Score=247, Expect=1e-75]} {Mouse: ENSMUSG00000042642, Flad1, flavin adenine dinucleotide synthetase 1, [Score=250, Expect=1e-76]} {Dmel: FBgn0032522, CG16848, [Score=60.1, Expect=8e-10]} {Celegans: WBGene00011271, flad-1, Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_8204_0_1, dd_Smed_v6_8204_0_1, [Score=233, Expect=3e-71]} {RNA1509_48770} {RNA1310_9199.1} {RNA815_5028} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 0.151 | 3.458 | 0.88604 | 1.00000 | |
RegionR2 | 0.619 | 3.458 | 0.29516 | 0.68373 | |
RegionR3 | 0.38 | 3.458 | 0.31748 | 0.85584 | |
RegionR4 | -0.692 | 3.458 | 0.25058 | 0.55006 | |
RegionR5 | -0.537 | 3.458 | 0.11479 | 0.33542 | |
RegionR6 | -0.289 | 3.458 | 0.47237 | 1.00000 | |
RegionR7 | -0.156 | 3.458 | 0.81320 | 1.00000 | |
RegionR8 | 0.524 | 3.458 | 0.45496 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -4.713 | 3.458 | 0.39113 | 1.00000 | |
RegenerationR2 | 0.396 | 3.458 | 0.45368 | 0.84908 | |
RegenerationR3 | -0.147 | 3.458 | 0.80587 | 0.98395 | |
RegenerationR4 | 0.073 | 3.458 | 0.88462 | 1.00000 | |
RegenerationR5 | 0.159 | 3.458 | 0.71697 | 0.95823 | |
RegenerationR6 | 0.547 | 3.458 | 0.34249 | 0.68807 | |
RegenerationBL | -0.363 | 3.458 | 0.71035 | 1.00000 | |
RegenerationTP | -1.505 | 3.458 | 0.12284 | 0.53155 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_50426 | 365 | 7.61 | Mlig455_027787 | Neo: - Age: - |
FLAD1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027787 {REF} {Length: 2692} {TRANSSPLICED} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=111.3]; Phosphoadenosine phosphosulfate reductase family [PF01507.21, score=29.4]} {Human: ENSG00000160688, FLAD1, flavin adenine dinucleotide synthetase 1, [Score=247, Expect=1e-75]} {Mouse: ENSMUSG00000042642, Flad1, flavin adenine dinucleotide synthetase 1, [Score=250, Expect=1e-76]} {Dmel: FBgn0032522, CG16848, [Score=60.1, Expect=8e-10]} {Celegans: WBGene00011271, flad-1, Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_8204_0_1, dd_Smed_v6_8204_0_1, [Score=233, Expect=3e-71]} {RNA1509_48770} {RNA1310_9199.1} {RNA815_5028} |
2. | MligTC455_20023 | 107 | 2.22 | Mlig455_022470, Mlig455_069866 | Neo: - Age: - |
NSD2 | 1.826 | - | - | 0.972 | - | - | 0.854 | Mlig455_022470 {REF} {Length: 545} {Pfam: PHD-finger [PF00628.31, score=22.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=19.7]} {RNA1310_48149} {RNA815_58756} Mlig455_069866 {REF} {Length: 452} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=106.0]; PHD-finger [PF00628.31, score=32.7]; AWS domain [PF17907.3, score=22.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=18.4]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=2e-54]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=8e-55]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=200, Expect=1e-51]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=172, Expect=2e-43]} {Smed: dd_Smed_v6_4755_0_2, dd_Smed_v6_4755_0_2, [Score=186, Expect=6e-49]} {RNA1310_48149} {RNA815_58756} |
3. | MligTC455_14931 | 126 | 2.62 | Mlig455_017837 | Neo: Int S/G2/M Age: - |
ZFAND1 | 0.985 | - | - | 0.985 | - | - | - | Mlig455_017837 {REF} {Length: 1432} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=50.5]} {Human: ENSG00000104231, ZFAND1, zinc finger AN1-type containing 1, [RH, Score=120, Expect=8e-32]} {Mouse: ENSMUSG00000039795, Zfand1, zinc finger, AN1-type domain 1, [RH, Score=103, Expect=1e-25]} {Dmel: FBgn0031535, CG12795, [Score=64.7, Expect=8e-12]} {Celegans: WBGene00000097, aip-1, Arsenite Inducible Protein, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_12611_0_1, dd_Smed_v6_12611_0_1, [RH, Score=79.7, Expect=2e-17]} {RNA1509_43206} {RNA1310_39084} {RNA815_24443} |
4. | MligTC455_07395 | 44 | 0.92 | Mlig455_059338 | Neo: - Age: - |
0.971 | - | - | 0.971 | - | - | - | Mlig455_059338 {REF} {Length: 8046} {Pfam: HEAT repeats [PF13646.8, score=28.2]} | |
5. | MligTC455_11886 | 197 | 4.1 | Mlig455_060688 | Neo: - |
0.969 | - | - | 0.969 | - | - | - | Mlig455_060688 {REF} {Length: 2150} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=44.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.5]} {Dmel: FBgn0050476, ave, aveugle, [RH, Score=45.4, Expect=1e-06]} {RNA1509_24373, RNA1509_52265} {RNA1310_35457.1, RNA1509_24373, RNA1509_52265} {RNA1509_24373, RNA1509_52265, RNA815_21293} | |
6. | MligTC455_53592 | 69 | 1.43 | Mlig455_002033 | Neo: - Age: Down-Up-Up |
0.969 | - | - | 0.969 | - | - | - | Mlig455_002033 {REF} {Length: 1968} {Pfam: Tetraspanin family [PF00335.22, score=27.4]} {RNA1509_42415} {RNA1310_22096} {RNA815_22407} | |
7. | MligTC455_25940 | 29 | 0.6 | Mlig455_003190 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_003190 {REF} {Length: 606} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293} | |
8. | MligTC455_37104 | 146 | 3.05 | Mlig455_026653, Mlig455_039048, Mlig455_052213 | Neo: - Age: - |
0.966 | - | - | 0.966 | - | - | - | Mlig455_026653 {REF} {Length: 2643} {Pfam: Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase [PF18371.3, score=23.2]} {RNA1509_49031} {RNA1310_34323} {RNA815_33771.1} Mlig455_039048 {REF} {Length: 1239} {Pfam: Chordin-like protein 1/2 C-terminal [PF19548.1, score=23.1]} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937} Mlig455_052213 {REF} {Length: 593} {RNA1509_49031} {RNA1310_97783} {RNA815_54937} |
|
9. | MligTC455_07681 | 11 | 0.24 | Mlig455_028257 | Neo: - Age: - |
HCN4 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_028257 {REF} {Length: 2915} {Pfam: Ion transport protein [PF00520.33, score=85.6]; Ion transport protein N-terminal [PF08412.12, score=78.6]; Cyclic nucleotide-binding domain [PF00027.31, score=70.1]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [RH, Score=635, Expect=0.0]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [RH, Score=630, Expect=0.0]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [RH, Score=615, Expect=0.0]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [RH, Score=604, Expect=0.0]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [RH, Score=600, Expect=0.0]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=186, Expect=6e-49]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [RH, Score=910, Expect=0.0]} {RNA1509_59211} {RNA1310_21771.2} {RNA815_15561.1} |
10. | MligTC455_17088 | 56 | 1.16 | Mlig455_022778 | Neo: - Age: logFC(26M/2M)=-0.737 |
0.965 | - | - | 0.965 | - | - | - | Mlig455_022778 {REF} {Length: 2080} {RNA1509_56619} {RNA1310_21133.1} {RNA815_8631.1} | |
11. | MligTC455_15964 | 150 | 3.13 | Mlig455_041648 | Neo: - Age: - |
SMAD4 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_041648 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=213.5]; MH1 domain [PF03165.18, score=129.8]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=447, Expect=1e-153]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=442, Expect=6e-151]} {Dmel: FBgn0011655, Med, Medea, [Score=278, Expect=1e-85]} {Celegans: WBGene00004858, sma-4, Dwarfin sma-4, [Score=288, Expect=5e-91]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=282, Expect=4e-88]} {RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1310_15699.1, RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1509_20434, RNA1509_52834, RNA1509_58190, RNA815_20871} |
12. | MligTC455_25941 | 28 | 0.59 | Mlig455_022342 | Neo: - Age: - |
0.961 | - | - | 0.961 | - | - | - | Mlig455_022342 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293} | |
13. | MligTC455_35437 | 351 | 7.32 | Mlig455_052908 | Neo: Int S/G2/M Age: Down-Up-Up |
PAK1IP1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_052908 {REF} {Length: 1694} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.7]} {Human: ENSG00000285226, PAK1IP1, PAK1 interacting protein 1, [RH, Score=125, Expect=9e-32]; ENSG00000111845, PAK1IP1, PAK1 interacting protein 1, [RH, Score=125, Expect=9e-32]} {Mouse: ENSMUSG00000038683, Pak1ip1, PAK1 interacting protein 1, [RH, Score=124, Expect=1e-31]} {Dmel: FBgn0030630, CG12608, [RH, Score=73.9, Expect=5e-14]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [Score=52.4, Expect=1e-07]} {RNA1509_19705, RNA1509_53597} {RNA1310_19924, RNA1509_53597} {RNA1509_53597, RNA815_8952} |
14. | MligTC455_30934 | 89 | 1.86 | Mlig455_044573 | Neo: - |
BCHE | 0.959 | - | - | 0.959 | - | - | - | Mlig455_044573 {REF} {Length: 2858} {Pfam: Carboxylesterase family [PF00135.30, score=252.0]} {Human: ENSG00000114200, BCHE, butyrylcholinesterase, [Score=155, Expect=1e-40]; ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=155, Expect=7e-41]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=156, Expect=3e-41]} {Dmel: FBgn0083975, Nlg4, Neuroligin 4, [Score=123, Expect=2e-29]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=123, Expect=9e-30]} {Smed: dd_Smed_v6_4800_0_2, dd_Smed_v6_4800_0_2, [Score=118, Expect=5e-28]} {RNA1509_58431} {RNA1310_12691} {RNA815_28725} |
15. | MligTC455_39857 | 27 | 0.55 | Mlig455_037127 | Neo: - Age: Down-Down-Down |
NECAB1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367} |
16. | MligTC455_27198 | 106 | 2.2 | Mlig455_039551 | Neo: - Age: Up-Down-Up |
MPP7 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_039551 {REF} {Length: 3414} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=44.5]; Guanylate kinase [PF00625.23, score=36.4]; L27 domain [PF02828.18, score=24.6]; Variant SH3 domain [PF07653.19, score=20.4]} {Human: ENSG00000150054, MPP7, membrane palmitoylated protein 7, [Score=268, Expect=5e-82]} {Mouse: ENSMUSG00000057440, Mpp7, membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), [Score=288, Expect=6e-90]} {Dmel: FBgn0050021, metro, menage a trois, [RH, Score=296, Expect=5e-93]} {Celegans: WBGene00021914, magu-1, MAGUK family, [Score=162, Expect=2e-43]} {Smed: dd_Smed_v6_7957_0_1, dd_Smed_v6_7957_0_1, [RH, Score=377, Expect=2e-124]} {RNA1509_59177} {RNA1310_8192} {RNA815_18062} |
17. | MligTC455_32695 | 269 | 5.61 | Mlig455_031878 | Neo: - Age: - Region-enriched R5: 2.191/0.02917 |
0.956 | - | - | 0.956 | - | - | - | Mlig455_031878 {REF} {Length: 1821} {TRANSSPLICED} {Pfam: Ribosome recycling factor [PF01765.21, score=70.6]} {Mouse: ENSMUSG00000026887, Mrrf, mitochondrial ribosome recycling factor, [RH, Score=57.4, Expect=2e-09]} {Dmel: FBgn0035980, mRRF1, mitochondrial ribosome recycling factor 1, [RH, Score=77.0, Expect=2e-16]} {RNA1509_38843} {RNA1310_31804} {RNA815_29259} | |
18. | MligTC455_50314 | 383 | 7.97 | Mlig455_064862 | Neo: - Age: logFC(26M/2M)=0.486 Regeneration-upregulated R6: 2.009 Regeneration-enriched R6: 2.009 |
CDK5RAP1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_064862 {REF} {Length: 2745} {TRANSSPLICED} {Pfam: Uncharacterized protein family UPF0004 [PF00919.22, score=91.9]; Radical SAM superfamily [PF04055.23, score=91.9]; TRAM domain [PF01938.22, score=30.0]} {Human: ENSG00000101391, CDK5RAP1, CDK5 regulatory subunit associated protein 1, [RH, Score=499, Expect=2e-171]} {Mouse: ENSMUSG00000027487, Cdk5rap1, CDK5 regulatory subunit associated protein 1, [RH, Score=496, Expect=2e-170]} {Dmel: FBgn0037816, CG6345, [RH, Score=481, Expect=7e-165]} {Celegans: WBGene00017776, F25B5.5, CDK5RAP1-like protein, [RH, Score=479, Expect=1e-164]} {Smed: dd_Smed_v6_11279_0_1, dd_Smed_v6_11279_0_1, [RH, Score=504, Expect=1e-174]} {RNA1509_30183, RNA1509_57503} {RNA1310_17864.1, RNA1509_30183, RNA1509_57503} {RNA1509_30183, RNA1509_57503, RNA815_6848} |
19. | MligTC455_52245 | 75 | 1.56 | Mlig455_060636 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.473 |
0.954 | - | - | 0.954 | - | - | - | Mlig455_060636 {REF} {Length: 2563} {TRANSSPLICED} {RNA1509_46209} {RNA1310_34218} {RNA815_23429} | |
20. | MligTC455_52541 | 35 | 0.73 | Mlig455_050186 | Neo: - |
TULP4 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_050186 {REF} {Length: 4750} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.7]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [Score=120, Expect=3e-29]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [Score=117, Expect=2e-28]} {Dmel: FBgn0039530, Tusp, [Score=132, Expect=1e-33]} {Celegans: WBGene00022139, tub-2, TUBby-related, [Score=82.8, Expect=4e-17]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=97.8, Expect=3e-22]} {RNA1509_52602, RNA1509_9068} {RNA1310_4370.1, RNA1509_52602} {RNA1509_52602, RNA815_13995} |
21. | MligTC455_35291 | 234 | 4.88 | Mlig455_027788, Mlig455_063457 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.963 Region-enriched R4: 3.530/0.01207 |
TMEM9 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_027788 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=50.6]} {RNA1509_36378} {RNA1310_37814.1, RNA1509_36378} {RNA1509_36378, RNA815_28046} Mlig455_063457 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=65.9]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [Score=46.6, Expect=8e-06]} {Celegans: WBGene00020026, R12C12.6, [RH, Score=57.0, Expect=2e-09]} {RNA1509_36378} {RNA1310_37814.1} {RNA815_28046} |
22. | MligTC455_36296 | 229 | 4.78 | Mlig455_044528 | Neo: - Age: Up-Down-Down |
TNS1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_044528 {REF} {Length: 3702} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=43.8]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=26.8]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=69.3, Expect=6e-12]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=70.9, Expect=1e-12]} {Dmel: FBgn0053993, CG33993, [Score=96.7, Expect=2e-22]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=68.6, Expect=5e-12]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [Score=126, Expect=3e-31]} {RNA1509_31201} {RNA1310_21195.1} {RNA815_15661.1} |
23. | MligTC455_40050 | 173 | 3.61 | Mlig455_058896 | Neo: Int S/G2/M Age: Up-Down-Down |
PBRM1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_058896 {REF} {Length: 5141} {Pfam: Bromodomain [PF00439.27, score=152.2]; BAH domain [PF01426.20, score=101.7]; HMG (high mobility group) box [PF00505.21, score=47.0]; HMG-box domain [PF09011.12, score=37.9]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=514, Expect=7e-157]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=513, Expect=3e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=412, Expect=1e-120]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=6e-93]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=670, Expect=0.0]} {RNA1509_5406} {RNA1310_918.1} {RNA815_609.1} |