TomoSeq data search

Data search

Results for MligTC455_50474

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50474

23

0.48

Mlig455_007135

Neo: -

Age: -

Mlig455_007135 {REF} {Length: 1227} {RNA1509_33263} {RNA1310_47821}

Cumulative graph for MligTC455_50474

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.497	0.893	0.99981	1.00000
RegionR2	3.921	0.893	0.09181	0.37186
RegionR3	-0.43	0.893	1.00000	1.00000
RegionR4	0.894	0.893	0.51395	0.83967
RegionR5	0.902	0.893	0.31164	0.65032
RegionR6	-0.506	0.893	1.00000	1.00000
RegionR7	-0.497	0.893	0.99983	1.00000
RegionR8	-0.788	0.893	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.928	0.893	0.99985	1.00000
RegenerationR2	-0.207	0.893	0.84018	1.00000
RegenerationR3	3.465	0.893	0.17593	0.61159
RegenerationR4	1.177	0.893	0.50359	0.87110
RegenerationR5	-1.299	0.893	0.33957	0.75748
RegenerationR6	4.649	0.893	0.08338	0.36096
RegenerationBL	4.956	0.893	0.04501	0.24274
RegenerationTP	0.466	0.893	1.00000	1.00000

Genes with expression patterns similar to MligTC455_50474

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50474	23	0.48	Mlig455_007135	Neo: - Age: -		3	-	1.000	-	1.000	1.000	-	Mlig455_007135 {REF} {Length: 1227} {RNA1509_33263} {RNA1310_47821}
2.	MligTC455_18527	360	7.5	Mlig455_012969, Mlig455_028760, Mlig455_033181, Mlig455_046334	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_012969 {REF} {Length: 8607} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_028760 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_033181 {REF} {Length: 5163} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_046334 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}
3.	MligTC455_23338	206	4.29	Mlig455_033045, Mlig455_053128	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.721	NEFH	0.965	-	-	-	0.965	-	-	Mlig455_033045 {REF} {Length: 9317} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=111, Expect=1e-24]} {Dmel: FBgn0029807, CG3108, [Score=53.1, Expect=8e-07]} {RNA1509_6333} {RNA1310_785} {RNA815_2080} Mlig455_053128 {REF} {Length: 16958} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=114, Expect=1e-25]} {Dmel: FBgn0029807, CG3108, [Score=52.4, Expect=1e-06]} {RNA1509_28919, RNA1509_6333} {RNA1310_785, RNA1509_28919} {RNA1509_28919, RNA815_2080}
4.	MligTC455_48676	61	1.26	Mlig455_044555	Neo: Irradiation Age: -	SFSWAP	0.961	-	-	-	0.961	-	-	Mlig455_044555 {REF} {Length: 3350} {Pfam: Surp module [PF01805.22, score=102.9]; Alternative splicing regulator [PF09750.11, score=78.7]} {Human: ENSG00000061936, SFSWAP, splicing factor SWAP, [RH, Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000029439, Sfswap, splicing factor SWAP, [RH, Score=140, Expect=2e-34]} {Dmel: FBgn0003638, su(w[a]), suppressor of white-apricot, [RH, Score=154, Expect=2e-39]} {Celegans: WBGene00006359, swp-1, Splicing factor (Suppressor of White aPricot) related, [RH, Score=89.0, Expect=2e-18]} {Smed: dd_Smed_v6_5178_0_1, dd_Smed_v6_5178_0_1, [Score=132, Expect=2e-34]} {RNA1509_13748, RNA1509_59124} {RNA1310_24942, RNA1509_13748, RNA1509_59124} {RNA1509_13748, RNA1509_59124, RNA815_2102}
5.	MligTC455_24040	77	1.6	Mlig455_033510	Neo: - Age: - Region-enriched R7: 5.524/0.00162		0.96	-	-	-	0.960	-	-	Mlig455_033510 {REF} {Length: 2880} {NoTransDecoderORF} {RNA1509_50322} {RNA1310_68317} {RNA815_47997}
6.	MligTC455_15170	36	0.75	Mlig455_016666	Neo: - Age: Up-Down-Down	GAB1	0.958	-	-	-	0.958	-	-	Mlig455_016666 {REF} {Length: 3810} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=44.4]} {Human: ENSG00000109458, GAB1, GRB2 associated binding protein 1, [RH, Score=59.7, Expect=8e-09]; ENSG00000160219, GAB3, GRB2 associated binding protein 3, [RH, Score=59.7, Expect=7e-09]} {Mouse: ENSMUSG00000032750, Gab3, growth factor receptor bound protein 2-associated protein 3, [RH, Score=55.1, Expect=1e-07]} {Dmel: FBgn0016794, dos, daughter of sevenless, [RH, Score=56.2, Expect=5e-08]} {Smed: dd_Smed_v6_8815_0_1, dd_Smed_v6_8815_0_1, [RH, Score=51.2, Expect=1e-06]} {RNA1509_7659} {RNA1310_20098} {RNA815_10250}
7.	MligTC455_41976	68	1.42	Mlig455_003394	Neo: - Age: -	GATAD2B	0.958	-	-	-	-	0.958	-	Mlig455_003394 {REF} {Length: 3774} {TRANSSPLICED} {Pfam: Coiled-coil and interaction region of P66A and P66B with MBD2 [PF16563.7, score=34.1]; GATA zinc finger [PF00320.29, score=22.9]; Cyclin-dependent kinase 2-associated protein [PF09806.11, score=19.9]} {Human: ENSG00000143614, GATAD2B, GATA zinc finger domain containing 2B, [RH, Score=145, Expect=3e-36]; ENSG00000167491, GATAD2A, GATA zinc finger domain containing 2A, [RH, Score=142, Expect=5e-35]} {Mouse: ENSMUSG00000042390, Gatad2b, GATA zinc finger domain containing 2B, [RH, Score=145, Expect=2e-36]; ENSMUSG00000036180, Gatad2a, GATA zinc finger domain containing 2A, [RH, Score=140, Expect=2e-34]} {Dmel: FBgn0010762, simj, simjang, [RH, Score=130, Expect=6e-31]} {Celegans: WBGene00000938, dcp-66, Deacetylase Complex Protein, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_3115_0_1, dd_Smed_v6_3115_0_1, [RH, Score=191, Expect=3e-52]} {RNA1509_10953} {RNA1310_7541} {RNA815_11439}
8.	MligTC455_33986	49	1.02	Mlig455_039144	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_039144 {REF} {Length: 3491} {TRANSSPLICED} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=52.7]} {RNA1509_11292} {RNA1310_7966.2} {RNA815_776.1}

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