Data search
Results for MligTC455_50484
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50484 | 162 | 3.37 | Mlig455_011331 | Neo: - Age: - |
SNED1 | Mlig455_011331 {REF} {Length: 1896} {Pfam: EGF-like domain [PF00008.29, score=24.1]; EGF-like domain [PF07974.15, score=20.3]; Family of unknown function (DUF5305) [PF17231.4, score=18.3]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=53.9, Expect=1e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.8, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.5, Expect=2e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=54.7, Expect=5e-08]} {Dmel: FBgn0259140, CG42255, [Score=48.5, Expect=4e-06]} {RNA1509_48141} {RNA1310_17044} {RNA815_10723.1} |
Cumulative graph for MligTC455_50484
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.43 | 2.402 | 0.22315 | 0.86713 | |
| RegionR2 | 1.222 | 2.402 | 0.23019 | 0.60263 | |
| RegionR3 | 1.016 | 2.402 | 0.30038 | 0.84241 | |
| RegionR4 | 1.134 | 2.402 | 0.24462 | 0.54306 | |
| RegionR5 | 0.442 | 2.402 | 0.65390 | 1.00000 | |
| RegionR6 | 0.335 | 2.402 | 0.71909 | 1.00000 | |
| RegionR7 | 2.046 | 2.402 | 0.04141 | 0.39016 | |
| RegionR8 | -0.766 | 2.402 | 0.97980 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.55 | 2.402 | 0.99996 | 1.00000 | |
| RegenerationR2 | -0.066 | 2.402 | 0.88098 | 1.00000 | |
| RegenerationR3 | 0.276 | 2.402 | 0.65515 | 0.93120 | |
| RegenerationR4 | 0.244 | 2.402 | 0.68171 | 0.94612 | |
| RegenerationR5 | 0.522 | 2.402 | 0.37934 | 0.78645 | |
| RegenerationR6 | 0.018 | 2.402 | 0.97184 | 1.00000 | |
| RegenerationBL | -0.02 | 2.402 | 0.99919 | 1.00000 | |
| RegenerationTP | 0.712 | 2.402 | 0.51587 | 0.91149 |
Genes with expression patterns similar to MligTC455_50484
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50484 | 162 | 3.37 | Mlig455_011331 | Neo: - Age: - |
SNED1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011331 {REF} {Length: 1896} {Pfam: EGF-like domain [PF00008.29, score=24.1]; EGF-like domain [PF07974.15, score=20.3]; Family of unknown function (DUF5305) [PF17231.4, score=18.3]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=53.9, Expect=1e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.8, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.5, Expect=2e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=54.7, Expect=5e-08]} {Dmel: FBgn0259140, CG42255, [Score=48.5, Expect=4e-06]} {RNA1509_48141} {RNA1310_17044} {RNA815_10723.1} |
| 2. | MligTC455_48595 | 503 | 10.48 | Mlig455_017699 | Neo: - Age: - Region-enriched R6: 1.813/0.03812 Regeneration-downregulated R6: -2.325 Regeneration-depleted R6: -2.325 |
2.512 | - | - | 0.788 | - | 0.955 | 0.769 | Mlig455_017699 {REF} {Length: 1875} {NoTransDecoderORF} {RNA1509_38710} {RNA1310_37566} {RNA815_20664} | |
| 3. | MligTC455_37471 | 494 | 10.29 | Mlig455_067139 | Neo: - Age: - |
1.709 | - | - | - | - | 0.955 | 0.754 | Mlig455_067139 {REF} {Length: 3223} {Pfam: Polymer-forming cytoskeletal [PF04519.15, score=36.7]} {RNA1509_58187} {RNA1310_57569} {RNA815_25125} | |
| 4. | MligTC455_49739 | 830 | 17.3 | Mlig455_044422, Mlig455_044457 | Neo: - Age: - Region-enriched R8: 2.666/0.03976 |
TTN | 1.694 | - | - | - | - | 0.950 | 0.744 | Mlig455_044422 {REF} {Length: 5565} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=194.3]; Immunoglobulin domain [PF13927.8, score=115.7]; Immunoglobulin domain [PF00047.27, score=80.0]; Immunoglobulin domain [PF13895.8, score=78.6]; Immunoglobulin V-set domain [PF07686.19, score=37.3]} {Human: ENSG00000155657, TTN, titin, [Score=89.7, Expect=5e-17]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0086906, sls, sallimus, [Score=289, Expect=3e-78]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_2928_0_1, dd_Smed_v6_2928_0_1, [Score=468, Expect=4e-146]} {RNA1509_19101} {RNA1310_4824.1} {RNA815_8416} Mlig455_044457 {REF} {Length: 5680} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=194.2]; Immunoglobulin domain [PF13927.8, score=115.6]; Immunoglobulin domain [PF00047.27, score=79.7]; Immunoglobulin domain [PF13895.8, score=76.8]; Immunoglobulin V-set domain [PF07686.19, score=37.6]} {Human: ENSG00000155657, TTN, titin, [Score=99.0, Expect=7e-20]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=92.4, Expect=4e-18]} {Dmel: FBgn0086906, sls, sallimus, [Score=292, Expect=3e-79]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=233, Expect=2e-61]} {Smed: dd_Smed_v6_2928_0_1, dd_Smed_v6_2928_0_1, [Score=464, Expect=1e-144]} {RNA1509_19101} {RNA1310_4824.1} {RNA815_8416} |
| 5. | MligTC455_38449 | 1049 | 21.85 | Mlig455_057986 | Neo: - Age: logFC(26M/2M)=-0.283 |
KIAA1257 | 1.69 | - | - | 0.739 | - | 0.951 | - | Mlig455_057986 {REF} {Length: 4685} {Pfam: Domain of unknown function (DUF4550) [PF15084.8, score=87.9]} {Human: ENSG00000114656, KIAA1257, KIAA1257, [RH, Score=334, Expect=8e-96]} {Smed: dd_Smed_v6_10058_0_1, dd_Smed_v6_10058_0_1, [RH, Score=244, Expect=6e-66]} {RNA1509_37750, RNA1509_4262} {RNA1310_1732, RNA1509_37750, RNA1509_4262} {RNA1509_37750, RNA1509_4262, RNA815_2079} |
| 6. | MligTC455_45053 | 2512 | 52.33 | Mlig455_016954, Mlig455_017042 | Neo: - |
COL24A1 | 1.678 | - | - | - | - | 0.969 | 0.709 | Mlig455_016954 {REF} {Length: 4803} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=483.8]; Fibrillar collagen C-terminal domain [PF01410.20, score=78.1]; von Willebrand factor type C domain [PF00093.20, score=19.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=370, Expect=1e-104]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=414, Expect=2e-121]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=362, Expect=3e-102]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=298, Expect=4e-82]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=492, Expect=2e-148]} {RNA1509_4110} {RNA1310_2861} {RNA815_3994} Mlig455_017042 {REF} {Length: 4695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=485.2]; Fibrillar collagen C-terminal domain [PF01410.20, score=78.1]; von Willebrand factor type C domain [PF00093.20, score=19.0]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=371, Expect=5e-105]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=416, Expect=2e-122]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=366, Expect=1e-103]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=308, Expect=5e-85]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=479, Expect=5e-144]} {RNA1509_4110} {RNA1310_2861} {RNA815_3994} |
| 7. | MligTC455_31225 | 140 | 2.91 | Mlig455_056695 | Neo: - Age: Up-Down-Down |
0.969 | - | - | - | - | - | 0.969 | Mlig455_056695 {REF} {Length: 4254} {RNA1509_56953} {RNA1310_86134, RNA1509_56953} {RNA1509_56953, RNA815_21196} | |
| 8. | MligTC455_33345 | 73 | 1.53 | Mlig455_022775 | Neo: - Age: Up-Down-Down |
ITPR2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_022775 {REF} {Length: 10477} {Pfam: RIH domain [PF01365.23, score=93.1]; RyR and IP3R Homology associated [PF08454.13, score=68.6]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.1]; MIR domain [PF02815.21, score=57.0]} {Human: ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=204, Expect=1e-51]} {Mouse: ENSMUSG00000030287, Itpr2, inositol 1,4,5-triphosphate receptor 2, [Score=206, Expect=3e-52]; ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=199, Expect=3e-50]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=157, Expect=1e-37]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=146, Expect=2e-34]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3019, Expect=0.0]} {RNA1509_31887} {RNA1310_193.1} {RNA815_9899} |
| 9. | MligTC455_50328 | 128 | 2.66 | Mlig455_039843 | Neo: - Age: - |
SCNN1B | 0.964 | - | - | - | - | 0.964 | - | Mlig455_039843 {REF} {Length: 2793} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=206.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=69.3, Expect=1e-11]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=58.9, Expect=1e-08]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=75.5, Expect=8e-14]} {Smed: dd_Smed_v6_23028_0_1, dd_Smed_v6_23028_0_1, [RH, Score=366, Expect=3e-118]} {RNA1509_37054} {RNA1310_10450, RNA1509_37054} {RNA1509_37054, RNA815_17111} |
| 10. | MligTC455_52370 | 274 | 5.7 | Mlig455_017817 | Neo: - Age: - |
ACBD3 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_017817 {REF} {Length: 3060} {TRANSSPLICED} {Pfam: Golgi-dynamics membrane-trafficking [PF13897.8, score=210.0]} {Human: ENSG00000182827, ACBD3, acyl-CoA binding domain containing 3, [Score=193, Expect=4e-56]} {Mouse: ENSMUSG00000026499, Acbd3, acyl-Coenzyme A binding domain containing 3, [Score=187, Expect=3e-54]} {Dmel: FBgn0031061, CG14232, [Score=203, Expect=2e-60]} {Celegans: WBGene00012765, Y41E3.7, [RH, Score=252, Expect=4e-81]} {Smed: dd_Smed_v6_2498_0_1, dd_Smed_v6_2498_0_1, [RH, Score=301, Expect=5e-101]} {RNA1509_14041, RNA1509_58820} {RNA1310_22568, RNA1509_14041, RNA1509_58820} {RNA1509_14041, RNA1509_58820, RNA815_7615} |
| 11. | MligTC455_43447 | 167 | 3.48 | Mlig455_029434 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_029434 {REF} {Length: 848} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=91.2]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [Score=85.9, Expect=4e-22]} {RNA1310_33601} {RNA815_52641} | |
| 12. | MligTC455_01844 | 19 | 0.39 | Mlig455_018022 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_018022 {REF} {Length: 633} {Pfam: Protein of unknown function (DUF445) [PF04286.14, score=28.6]; EcsC protein family [PF12787.9, score=22.1]; Spore germination protein GerPC [PF10737.11, score=21.1]; Protein export membrane protein [PF02355.18, score=19.8]} {Mouse: ENSMUSG00000046056, Sbsn, suprabasin, [Score=53.1, Expect=4e-08]} {RNA1509_60122} {RNA1310_51739} {RNA815_33980} | |
| 13. | MligTC455_37026 | 109 | 2.28 | Mlig455_029463 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_029463 {REF} {Length: 788} {RNA1310_43520} {RNA815_2407} | |
| 14. | MligTC455_18224 | 166 | 3.45 | Mlig455_005350 | Neo: - Age: - |
KCNA2 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_005350 {REF} {Length: 3033} {Pfam: Ion transport protein [PF00520.33, score=167.1]; BTB/POZ domain [PF02214.24, score=98.0]; Ion channel [PF07885.18, score=49.0]} {Human: ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=605, Expect=0.0]; ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=601, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=607, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=600, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=629, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=380, Expect=3e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=704, Expect=0.0]} {RNA1509_33947} {RNA1310_1447.1} {RNA815_7992} |
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