M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43447

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43447 167 3.48 Mlig455_029434

Neo: -

Age: -

 Mlig455_029434 {REF} {Length: 848} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=91.2]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [Score=85.9, Expect=4e-22]} {RNA1310_33601} {RNA815_52641}

Cumulative graph for MligTC455_43447

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.08 2.468 0.96862 1.00000
RegionR2 0.429 2.468 0.59358 0.94574
RegionR3 0.391 2.468 0.54671 1.00000
RegionR4 1.538 2.468 0.05225 0.19867
RegionR5 0.226 2.468 0.71518 1.00000
RegionR6 -0.629 2.468 0.42347 0.98997
RegionR7 0.279 2.468 0.74174 1.00000
RegionR8 -2.314 2.468 0.14034 0.68429

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.054 2.468 0.40287 1.00000
RegenerationR2 0.012 2.468 0.98261 1.00000
RegenerationR3 -0.419 2.468 0.52162 0.86752
RegenerationR4 -1.074 2.468 0.12489 0.53764
RegenerationR5 -0.848 2.468 0.18793 0.61823
RegenerationR6 -0.133 2.468 0.86822 1.00000
RegenerationBL 0.772 2.468 0.45296 0.81995
RegenerationTP -1.06 2.468 0.50812 0.90552


Genes with expression patterns similar to MligTC455_43447

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43447 167 3.48 Mlig455_029434

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_029434 {REF} {Length: 848} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=91.2]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [Score=85.9, Expect=4e-22]} {RNA1310_33601} {RNA815_52641}
2. MligTC455_19509 232 4.83 Mlig455_018973

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.427

 HMCN1 1.817 - - 0.866 - 0.951 - Mlig455_018973 {REF} {Length: 4775} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=103.1]; Immunoglobulin domain [PF13927.8, score=98.9]; Immunoglobulin domain [PF13895.8, score=66.1]; Immunoglobulin domain [PF00047.27, score=49.7]; Immunoglobulin V-set domain [PF07686.19, score=40.7]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=95.9, Expect=1e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=97.8, Expect=2e-20]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [Score=76.6, Expect=4e-14]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=72.4, Expect=7e-13]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=86.3, Expect=2e-17]} {RNA1509_10174} {RNA1310_1561.1} {RNA815_4892}
3. MligTC455_29698 153 3.19 Mlig455_038104

Neo: -

Age: logFC(26M/2M)=-0.330

 ANKRD17 1.782 - - 0.824 0.958 - - Mlig455_038104 {REF} {Length: 7732} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=444.0]; Ankyrin repeats (many copies) [PF13637.8, score=254.7]; Ankyrin repeats (many copies) [PF13857.8, score=146.5]; Ankyrin repeat [PF13606.8, score=141.2]; Transcription factor BRX N-terminal domain [PF13713.8, score=129.7]; Ankyrin repeat [PF00023.32, score=103.7]; Domain of unknown function (DUF4476) [PF14771.8, score=54.5]; Mab-21 protein [PF03281.16, score=36.7]; HEAT repeats [PF13646.8, score=20.0]; Protein of unknown function (DUF3307) [PF11750.10, score=18.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=167, Expect=1e-40]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=166, Expect=2e-40]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=114, Expect=7e-25]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=8e-27]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=160, Expect=2e-39]} {RNA1509_27730, RNA1509_55013} {RNA1310_21755.1, RNA1509_55013} {RNA1509_55013, RNA815_2426.1}
4. MligTC455_51857 598 12.47 Mlig455_024455

Neo: -

Age: -

 MDH1B 1.771 - - 0.965 - 0.806 - Mlig455_024455 {REF} {Length: 1886} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=38.0]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [RH, Score=258, Expect=2e-79]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [RH, Score=238, Expect=3e-72]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=75.9, Expect=8e-15]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [Score=279, Expect=6e-87]} {RNA1509_21048} {RNA1310_31155} {RNA815_18662}
5. MligTC455_51745 267 5.56 Mlig455_007920

Neo: -

Age: -

 FOXJ3 1.758 - - 0.790 - 0.968 - Mlig455_007920 {REF} {Length: 2476} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=4e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=164, Expect=5e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637, RNA1509_37021, RNA1509_41082} {RNA1310_12207, RNA1509_37021, RNA1509_41082} {RNA1509_37021, RNA1509_41082, RNA815_17037}
6. MligTC455_50147 76 1.59 Mlig455_046359

Neo: -

Age: -

 1.746 - - - 0.965 - 0.781 Mlig455_046359 {REF} {Length: 1425} {RNA1509_15977} {RNA1310_48391} {RNA815_20870.1}
7. MligTC455_19115 184 3.83 Mlig455_044234

Neo: -

Age: logFC(26M/2M)=-0.512

Region-enriched R4: 3.012/0.02283

 1.714 - - - 0.954 - 0.760 Mlig455_044234 {REF} {Length: 1695} {RNA1509_40702} {RNA1310_18749, RNA1509_40702} {RNA1509_40702, RNA815_7953}
8. MligTC455_05969 143 2.98 Mlig455_008036, Mlig455_008076

Neo: -

Age: Up-Down-Up

 CHRM3 1.709 - - - 0.744 0.965 -

Mlig455_008036 {REF} {Length: 4356} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=235.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=49.3]; Olfactory receptor [PF13853.8, score=29.1]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=252, Expect=3e-75]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=248, Expect=3e-74]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=216, Expect=9e-61]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=246, Expect=2e-73]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=243, Expect=3e-73]} {RNA1509_25623} {RNA1310_4787.1} {RNA815_38888}

Mlig455_008076 {REF} {Length: 6010} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=260.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=48.6]; Olfactory receptor [PF13853.8, score=28.2]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [RH, Score=306, Expect=1e-95]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [RH, Score=302, Expect=3e-94]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=215, Expect=4e-60]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=307, Expect=2e-96]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=303, Expect=1e-95]} {RNA1509_25623} {RNA1310_4787.1, RNA1509_25623} {RNA1509_25623, RNA815_17017}
9. MligTC455_47929 241 5.03 Mlig455_039754

Neo: -

Age: Down-Up-Up

 CALM2 1.697 - - - 0.746 - 0.951 Mlig455_039754 {REF} {Length: 1506} {Pfam: EF hand [PF00036.34, score=107.7]; EF-hand domain pair [PF13499.8, score=86.0]; EF-hand domain [PF13405.8, score=84.4]; EF hand [PF13202.8, score=79.9]; EF-hand domain pair [PF13833.8, score=67.3]; EF-hand domain [PF14658.8, score=31.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=132, Expect=3e-39]; ENSG00000198668, CALM1, calmodulin 1, [Score=132, Expect=2e-39]; ENSG00000160014, CALM3, calmodulin 3, [Score=132, Expect=3e-39]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=132, Expect=2e-39]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=132, Expect=2e-39]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=132, Expect=2e-39]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=130, Expect=2e-38]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=130, Expect=7e-39]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=130, Expect=6e-39]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=130, Expect=4e-39]} {RNA1509_23387} {RNA1310_47477} {RNA815_23107}
10. MligTC455_38449 1049 21.85 Mlig455_057986

Neo: -

Age: logFC(26M/2M)=-0.283

 KIAA1257 1.695 - - - 0.744 0.951 - Mlig455_057986 {REF} {Length: 4685} {Pfam: Domain of unknown function (DUF4550) [PF15084.8, score=87.9]} {Human: ENSG00000114656, KIAA1257, KIAA1257, [RH, Score=334, Expect=8e-96]} {Smed: dd_Smed_v6_10058_0_1, dd_Smed_v6_10058_0_1, [RH, Score=244, Expect=6e-66]} {RNA1509_37750, RNA1509_4262} {RNA1310_1732, RNA1509_37750, RNA1509_4262} {RNA1509_37750, RNA1509_4262, RNA815_2079}
11. MligTC455_29971 111 2.31 Mlig455_006512

Neo: -

Age: -

 CRB2 1.677 - 0.714 - 0.963 - - Mlig455_006512 {REF} {Length: 4810} {Pfam: EGF-like domain [PF00008.29, score=148.0]; Human growth factor-like EGF [PF12661.9, score=63.1]; Laminin G domain [PF02210.26, score=25.7]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [RH, Score=360, Expect=8e-105]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [RH, Score=358, Expect=3e-104]} {Dmel: FBgn0259685, crb, crumbs, [Score=412, Expect=2e-120]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=201, Expect=5e-52]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=230, Expect=3e-61]} {RNA1509_50019} {RNA1310_14888.1} {RNA815_693.1}
12. MligTC455_48595 503 10.48 Mlig455_017699

Neo: -

Age: -

Region-enriched R6: 1.813/0.03812

Regeneration-downregulated R6: -2.325

Regeneration-depleted R6: -2.325

 0.988 - - - - 0.988 - Mlig455_017699 {REF} {Length: 1875} {NoTransDecoderORF} {RNA1509_38710} {RNA1310_37566} {RNA815_20664}
13. MligTC455_48597 279 5.8 Mlig455_053761

Neo: -

Age: logFC(26M/2M)=0.422

Regeneration-downregulated R6: -2.401

Regeneration-depleted R6: -2.401

 LIMA1 0.971 - - - - 0.971 - Mlig455_053761 {REF} {Length: 1783} {Pfam: LIM domain [PF00412.24, score=52.9]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=75.1, Expect=4e-17]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=73.6, Expect=1e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=70.5, Expect=2e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.5, Expect=2e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.2, Expect=1e-16]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=111, Expect=5e-34]} {RNA1509_38710} {RNA1310_37566} {RNA815_20664}
14. MligTC455_49160 129 2.68 Mlig455_062354

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_062354 {REF} {Length: 383} {NoTransDecoderORF} {RNA1509_40326} {RNA1310_30049}
15. MligTC455_43376 514 10.7 Mlig455_003642

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.256

 COL24A1 0.968 - - - - 0.968 - Mlig455_003642 {REF} {Length: 4631} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=485.0]; Fibrillar collagen C-terminal domain [PF01410.20, score=111.7]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=370, Expect=1e-105]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=394, Expect=2e-115]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=346, Expect=1e-97]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=276, Expect=2e-75]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=473, Expect=1e-142]} {RNA1509_4709} {RNA1310_1394} {RNA815_513}
16. MligTC455_37017 345 7.2 Mlig455_035238

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418}
17. MligTC455_24525 354 7.37 Mlig455_007869

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 2.053/0.02539

 MAST1 0.961 - - - - 0.961 - Mlig455_007869 {REF} {Length: 5535} {Pfam: Domain of unknown function (DUF1908) [PF08926.13, score=296.2]; Protein kinase domain [PF00069.27, score=197.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.3]; PDZ domain [PF17820.3, score=29.9]; PDZ domain [PF13180.8, score=23.9]; PDZ domain [PF00595.26, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=23.1]; Kinase-like [PF14531.8, score=18.9]} {Human: ENSG00000105613, MAST1, microtubule associated serine/threonine kinase 1, [RH, Score=696, Expect=0.0]; ENSG00000069020, MAST4, microtubule associated serine/threonine kinase family member 4, [RH, Score=687, Expect=0.0]; ENSG00000086015, MAST2, microtubule associated serine/threonine kinase 2, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000053693, Mast1, microtubule associated serine/threonine kinase 1, [RH, Score=697, Expect=0.0]; ENSMUSG00000034751, Mast4, microtubule associated serine/threonine kinase family member 4, [RH, Score=682, Expect=0.0]; ENSMUSG00000003810, Mast2, microtubule associated serine/threonine kinase 2, [RH, Score=675, Expect=0.0]; ENSMUSG00000031833, Mast3, microtubule associated serine/threonine kinase 3, [RH, Score=664, Expect=0.0]; ENSMUSG00000110763, Mast3, microtubule associated serine/threonine kinase 3, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0267390, dop, drop out, [RH, Score=510, Expect=3e-153]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [RH, Score=563, Expect=8e-176]} {Smed: dd_Smed_v6_2028_0_1, dd_Smed_v6_2028_0_1, [RH, Score=682, Expect=0.0]} {RNA1509_37039} {RNA1310_2344.2, RNA1509_37039} {RNA1509_37039, RNA815_8686}
18. MligTC455_28801 55 1.14 Mlig455_041745

Neo: -

Age: -

 RTL1 0.96 - - - - - 0.960 Mlig455_041745 {REF} {Length: 7682} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=98.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=91.2]; Aspartyl protease [PF09668.12, score=25.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.4]; Aspartyl protease [PF13650.8, score=22.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=107, Expect=6e-23]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=323, Expect=5e-98]} {RNA1509_53012} {RNA1310_832} {RNA815_19380}
19. MligTC455_22447 114 2.38 Mlig455_016734

Neo: Irradiation

Age: -

 TTLL12 0.959 - - - 0.959 - - Mlig455_016734 {REF} {Length: 8252} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=148.7]; Calx-beta domain [PF03160.16, score=117.1]; 7 transmembrane receptor (Secretin family) [PF00002.26, score=44.2]; GPCR proteolysis site, GPS, motif [PF01825.23, score=23.8]} {Human: ENSG00000100304, TTLL12, tubulin tyrosine ligase like 12, [Score=346, Expect=1e-102]; ENSG00000164199, ADGRV1, adhesion G protein-coupled receptor V1, [Score=332, Expect=1e-90]} {Mouse: ENSMUSG00000016757, Ttll12, tubulin tyrosine ligase-like family, member 12, [Score=343, Expect=7e-102]} {Dmel: FBgn0033225, CG1550, [Score=329, Expect=2e-97]} {Celegans: WBGene00008405, ttll-12, Tubulin--tyrosine ligase-like protein 12, [Score=282, Expect=7e-81]} {Smed: dd_Smed_v6_3332_0_1, dd_Smed_v6_3332_0_1, [RH, Score=337, Expect=3e-100]} {RNA1509_41177} {RNA1310_5342.1, RNA1509_41177} {RNA1509_41177, RNA815_1896}
20. MligTC455_24940 3175 66.14 Mlig455_011276, Mlig455_011374

Neo: -

Age: Down-Up-Up

 0.959 - - - 0.959 - -

Mlig455_011276 {REF} {Length: 3380} {Pfam: Reeler domain [PF02014.18, score=50.9]; Eukaryotic cytochrome b561 [PF03188.18, score=38.4]} {Celegans: WBGene00007339, C05D12.1, [Score=68.2, Expect=9e-12]} {Smed: dd_Smed_v6_13311_0_1, dd_Smed_v6_13311_0_1, [Score=155, Expect=4e-40]} {RNA1509_34604, RNA1509_36747, RNA1509_52003, RNA1509_58766} {RNA1310_16616, RNA1509_36747, RNA1509_52003, RNA1509_58766} {RNA1509_36747, RNA1509_52003, RNA1509_58766, RNA815_3087.1}

Mlig455_011374 {REF} {Length: 4099} {Pfam: Reeler domain [PF02014.18, score=51.0]; Eukaryotic cytochrome b561 [PF03188.18, score=38.1]} {Celegans: WBGene00007339, C05D12.1, [Score=68.2, Expect=8e-12]} {Smed: dd_Smed_v6_13311_0_1, dd_Smed_v6_13311_0_1, [Score=153, Expect=2e-39]} {RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699} {RNA1310_16616, RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699} {RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699, RNA815_3087.1}
21. MligTC455_26561 64 1.32 Mlig455_070940

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_070940 {REF} {Length: 1652} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3096) [PF11295.10, score=23.9]} {RNA1509_55741} {RNA1310_34586} {RNA815_56684}
22. MligTC455_40849 213 4.44 Mlig455_030783, Mlig455_047791

Neo: -

Age: logFC(26M/2M)=-0.387

 0.959 - - - 0.959 - -

Mlig455_030783 {REF} {Length: 1480} {RNA1310_22569} {RNA815_10132.1}

Mlig455_047791 {REF} {Length: 1906} {NoTransDecoderORF} {RNA1509_49832} {RNA1310_22569} {RNA815_10132.1}
23. MligTC455_50484 162 3.37 Mlig455_011331

Neo: -

Age: -

 SNED1 0.959 - - - - 0.959 - Mlig455_011331 {REF} {Length: 1896} {Pfam: EGF-like domain [PF00008.29, score=24.1]; EGF-like domain [PF07974.15, score=20.3]; Family of unknown function (DUF5305) [PF17231.4, score=18.3]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=53.9, Expect=1e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.8, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.5, Expect=2e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=54.7, Expect=5e-08]} {Dmel: FBgn0259140, CG42255, [Score=48.5, Expect=4e-06]} {RNA1509_48141} {RNA1310_17044} {RNA815_10723.1}
24. MligTC455_26207 143 2.97 Mlig455_049857

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_049857 {REF} {Length: 4745} {Pfam: P21-Rho-binding domain [PF00786.30, score=31.2]} {RNA1509_9659} {RNA1310_11243.1} {RNA815_9336}
25. MligTC455_41473 358 7.45 Mlig455_014753

Neo: -

Age: Down-Up-Down

 DNAJC27 0.956 - - - 0.956 - - Mlig455_014753 {REF} {Length: 1010} {Pfam: Ras family [PF00071.24, score=116.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=59.0]; ADP-ribosylation factor family [PF00025.23, score=42.1]; 50S ribosome-binding GTPase [PF01926.25, score=24.8]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=20.3]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=3e-29]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=108, Expect=4e-29]} {Dmel: FBgn0029959, Rab39, [Score=99.0, Expect=2e-25]} {Celegans: WBGene00004279, rab-21, RAB family, [Score=94.0, Expect=9e-24]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=112, Expect=4e-31]} {RNA1509_34577} {RNA1310_27449.1} {RNA815_21008}
26. MligTC455_17723 358 7.45 Mlig455_001055

Neo: Irradiation

Age: -

 SLC20A1 0.955 - - - - 0.955 - Mlig455_001055 {REF} {Length: 3472} {Pfam: Phosphate transporter family [PF01384.22, score=448.5]} {Human: ENSG00000144136, SLC20A1, solute carrier family 20 member 1, [RH, Score=288, Expect=2e-88]; ENSG00000168575, SLC20A2, solute carrier family 20 member 2, [RH, Score=281, Expect=4e-86]} {Mouse: ENSMUSG00000027397, Slc20a1, solute carrier family 20, member 1, [RH, Score=286, Expect=1e-87]; ENSMUSG00000037656, Slc20a2, solute carrier family 20, member 2, [RH, Score=277, Expect=1e-84]} {Dmel: FBgn0260795, NaPi-III, Na[+]-dependent inorganic phosphate cotransporter type III, [RH, Score=275, Expect=9e-84]} {Celegans: WBGene00016739, pitr-1, Phosphate transporter, [RH, Score=409, Expect=3e-137]} {Smed: dd_Smed_v6_15197_0_1, dd_Smed_v6_15197_0_1, [RH, Score=521, Expect=0.0]} {RNA1509_41070, RNA1509_51244, RNA1509_52575, RNA1509_9080} {RNA1310_12086, RNA1509_41070, RNA1509_51244, RNA1509_52575, RNA1509_9080} {RNA1509_41070, RNA1509_51244, RNA1509_52575, RNA1509_9080, RNA815_4727}
27. MligTC455_27106 105 2.18 Mlig455_022612

Neo: -

Age: Up-Down-Down

 0.954 - - - 0.954 - - Mlig455_022612 {REF} {Length: 6144} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=157.1]; TIR domain [PF01582.22, score=29.6]; Death domain [PF00531.24, score=29.1]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [RH, Score=638, Expect=0.0]} {RNA1509_29883, RNA1509_42445, RNA1509_47365} {RNA1310_6245, RNA1509_29883, RNA1509_42445, RNA1509_47365} {RNA1509_29883, RNA1509_42445, RNA1509_47365, RNA815_1037}
28. MligTC455_51867 238 4.97 Mlig455_051265

Neo: -

Age: -

 NEK1 0.953 - - - 0.953 - - Mlig455_051265 {REF} {Length: 5255} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=227.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=158.9]; Kinase-like [PF14531.8, score=26.1]; ABC1 atypical kinase-like domain [PF03109.18, score=24.4]} {Human: ENSG00000137601, NEK1, NIMA related kinase 1, [RH, Score=384, Expect=5e-113]} {Mouse: ENSMUSG00000031644, Nek1, NIMA (never in mitosis gene a)-related expressed kinase 1, [RH, Score=380, Expect=1e-111]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=213, Expect=5e-57]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=216, Expect=2e-57]} {Smed: dd_Smed_v6_11366_0_1, dd_Smed_v6_11366_0_1, [RH, Score=299, Expect=3e-84]} {RNA1509_27598} {RNA1310_1375.1} {RNA815_18404}
29. MligTC455_33345 73 1.53 Mlig455_022775

Neo: -

Age: Up-Down-Down

 ITPR2 0.951 - - - - 0.951 - Mlig455_022775 {REF} {Length: 10477} {Pfam: RIH domain [PF01365.23, score=93.1]; RyR and IP3R Homology associated [PF08454.13, score=68.6]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.1]; MIR domain [PF02815.21, score=57.0]} {Human: ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=204, Expect=1e-51]} {Mouse: ENSMUSG00000030287, Itpr2, inositol 1,4,5-triphosphate receptor 2, [Score=206, Expect=3e-52]; ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=199, Expect=3e-50]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=157, Expect=1e-37]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=146, Expect=2e-34]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3019, Expect=0.0]} {RNA1509_31887} {RNA1310_193.1} {RNA815_9899}
30. MligTC455_38055 149 3.1 Mlig455_042999

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_042999 {REF} {Length: 2994} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=34.7]} {RNA1509_1341} {RNA1310_73219} {RNA815_46869}
31. MligTC455_45055 25 0.52 Mlig455_068371

Neo: -

Age: Down-Down-Up

 UBL3 0.951 - - - - - 0.951 Mlig455_068371 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=89.3]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [Score=133, Expect=4e-41]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [Score=133, Expect=4e-41]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=129, Expect=5e-37]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [RH, Score=113, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=99.8, Expect=2e-28]} {RNA1509_18224} {RNA1310_51551, RNA1509_18224} {RNA1509_18224, RNA815_23727}
32. MligTC455_48259 676 14.08 Mlig455_020900

Neo: -

Age: -

 CALM2 0.951 - - - 0.951 - - Mlig455_020900 {REF} {Length: 1620} {Pfam: EF hand [PF00036.34, score=97.7]; EF-hand domain pair [PF13499.8, score=83.8]; EF hand [PF13202.8, score=77.0]; EF-hand domain [PF13405.8, score=71.6]; EF-hand domain pair [PF13833.8, score=70.2]; EF-hand domain [PF14658.8, score=31.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=25.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=104, Expect=2e-27]; ENSG00000198668, CALM1, calmodulin 1, [Score=103, Expect=9e-28]; ENSG00000160014, CALM3, calmodulin 3, [Score=103, Expect=1e-27]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=105, Expect=8e-28]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=103, Expect=7e-28]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=103, Expect=7e-28]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=100, Expect=2e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=103, Expect=1e-27]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=103, Expect=8e-28]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=104, Expect=3e-28]} {RNA1509_42541, RNA1509_8417} {RNA1310_18928.1, RNA1509_42541, RNA1509_8417} {RNA1509_42541, RNA1509_8417, RNA815_13201}
33. MligTC455_26994 250 5.2 Mlig455_032952

Neo: -

Age: -

 GTPBP2 0.95 - - - - - 0.950 Mlig455_032952 {REF} {Length: 4484} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=75.7]; hAT family C-terminal dimerisation region [PF05699.16, score=47.0]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=20.1]} {Human: ENSG00000172432, GTPBP2, GTP binding protein 2, [Score=408, Expect=3e-129]} {Mouse: ENSMUSG00000023952, Gtpbp2, GTP binding protein 2, [Score=408, Expect=3e-129]} {Dmel: FBgn0037391, CG2017, [Score=358, Expect=8e-111]} {Celegans: WBGene00011449, T04H1.2, [RH, Score=350, Expect=4e-108]} {Smed: dd_Smed_v6_10435_0_1, dd_Smed_v6_10435_0_1, [RH, Score=329, Expect=2e-98]} {RNA1509_39291} {RNA1310_9075} {RNA815_7492}
34. MligTC455_27649 366 7.62 Mlig455_017718, Mlig455_057045

Neo: -

Age: logFC(26M/2M)=0.439

 ADAM9 0.95 - - - 0.950 - -

Mlig455_017718 {REF} {Length: 3325} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=133.0]; Disintegrin [PF00200.25, score=68.9]; Metallo-peptidase family M12 [PF13688.8, score=68.7]; ADAM cysteine-rich [PF08516.14, score=58.7]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=52.3]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=44.6]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=32.0]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [RH, Score=272, Expect=2e-78]; ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [RH, Score=268, Expect=1e-76]} {Mouse: ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [RH, Score=276, Expect=2e-79]} {Dmel: FBgn0265140, Meltrin, [Score=262, Expect=7e-73]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [RH, Score=263, Expect=9e-75]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=247, Expect=2e-68]} {RNA1509_19133, RNA1509_24635, RNA1509_4260, RNA1509_50111} {RNA1310_4299.1, RNA1509_19133, RNA1509_24635, RNA1509_50111} {RNA1509_19133, RNA1509_24635, RNA1509_50111, RNA815_11215.1}

Mlig455_057045 {REF} {Length: 3286} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=133.0]; Disintegrin [PF00200.25, score=69.2]; Metallo-peptidase family M12 [PF13688.8, score=68.8]; ADAM cysteine-rich [PF08516.14, score=58.7]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=52.3]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=44.6]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=32.0]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [RH, Score=273, Expect=2e-78]; ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [RH, Score=268, Expect=7e-77]} {Mouse: ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [RH, Score=280, Expect=5e-81]} {Dmel: FBgn0265140, Meltrin, [Score=259, Expect=5e-73]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [RH, Score=263, Expect=8e-75]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=247, Expect=2e-68]} {RNA1509_22944, RNA1509_4260} {RNA1310_4299.1, RNA1509_22944, RNA1509_4260} {RNA1509_22944, RNA1509_4260, RNA815_11215.1}
35. MligTC455_30353 28486 593.46 Mlig455_048234

Neo: -

Age: Up-Down-Up

 TUBB4B 0.95 - - - 0.950 - - Mlig455_048234 {REF} {Length: 2052} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=232.0]; Tubulin C-terminal domain [PF03953.19, score=144.9]; Misato Segment II tubulin-like domain [PF10644.11, score=24.4]} {Human: ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [RH, Score=922, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [RH, Score=910, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [RH, Score=908, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [RH, Score=905, Expect=0.0]} {Mouse: ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [RH, Score=922, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [RH, Score=910, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [RH, Score=908, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [RH, Score=905, Expect=0.0]; ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [RH, Score=905, Expect=0.0]} {Dmel: FBgn0284243, betaTub56D, beta-Tubulin at 56D, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=860, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, dd_Smed_v6_83_0_3, [RH, Score=919, Expect=0.0]} {RNA1509_1311, RNA1509_13882, RNA1509_1520, RNA1509_18329, RNA1509_2072, RNA1509_3253, RNA1509_4483, RNA1509_51206, RNA1509_7458, RNA1509_7539} {RNA1310_15130.1, RNA1509_1311, RNA1509_13882, RNA1509_1520, RNA1509_18329, RNA1509_2072, RNA1509_3253, RNA1509_4483, RNA1509_51206, RNA1509_7458, RNA1509_7539} {RNA1509_1311, RNA1509_13882, RNA1509_1520, RNA1509_18329, RNA1509_2072, RNA1509_3253, RNA1509_4483, RNA1509_51206, RNA1509_7458, RNA1509_7539, RNA815_1610.2}
36. MligTC455_34559 580 12.07 Mlig455_066815

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.459

 GSTA2 0.95 - - - 0.950 - - Mlig455_066815 {REF} {Length: 1741} {Pfam: Glutathione S-transferase, N-terminal domain [PF02798.22, score=40.7]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=27.2]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=27.1]} {Human: ENSG00000244067, GSTA2, glutathione S-transferase alpha 2, [Score=66.6, Expect=8e-13]; ENSG00000243955, GSTA1, glutathione S-transferase alpha 1, [Score=64.7, Expect=3e-12]} {Mouse: ENSMUSG00000032348, Gsta4, glutathione S-transferase, alpha 4, [RH, Score=58.9, Expect=4e-11]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=66.6, Expect=5e-13]} {Celegans: WBGene00001786, gst-38, Glutathione S-Transferase, [Score=65.1, Expect=8e-13]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=95.1, Expect=3e-24]} {RNA1509_50934} {RNA1310_26310, RNA1509_50934} {RNA1509_50934, RNA815_40328}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA