Data search
Results for MligTC455_50537
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50537 | 367 | 7.65 | Mlig455_051692 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.564/0.03047 |
TJAP1 | Mlig455_051692 {REF} {Length: 1381} {TRANSSPLICED} {Human: ENSG00000137221, TJAP1, tight junction associated protein 1, [RH, Score=53.1, Expect=2e-07]} {Dmel: FBgn0259224, CG42324, [RH, Score=78.6, Expect=3e-16]} {Smed: dd_Smed_v6_7904_0_1, dd_Smed_v6_7904_0_1, [RH, Score=105, Expect=8e-27]} {RNA1509_16465} {RNA1310_23318} {RNA815_12833.1} |
Cumulative graph for MligTC455_50537
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.441 | 3.49 | 0.33696 | 0.98311 | |
| RegionR2 | 0.38 | 3.49 | 0.56382 | 0.92564 | |
| RegionR3 | -0.003 | 3.49 | 0.99975 | 1.00000 | |
| RegionR4 | 1.564 | 3.49 | 0.00399 | 0.03047 | |
| RegionR5 | 0.211 | 3.49 | 0.66606 | 1.00000 | |
| RegionR6 | 0.416 | 3.49 | 0.44383 | 1.00000 | |
| RegionR7 | 0.04 | 3.49 | 0.95197 | 1.00000 | |
| RegionR8 | -1.166 | 3.49 | 0.24291 | 0.85977 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.496 | 3.49 | 0.30645 | 0.99989 | |
| RegenerationR2 | 0.072 | 3.49 | 0.89054 | 1.00000 | |
| RegenerationR3 | 0.537 | 3.49 | 0.36079 | 0.77735 | |
| RegenerationR4 | -0.99 | 3.49 | 0.08308 | 0.45609 | |
| RegenerationR5 | -0.026 | 3.49 | 0.96050 | 1.00000 | |
| RegenerationR6 | -0.365 | 3.49 | 0.53815 | 0.83196 | |
| RegenerationBL | -0.077 | 3.49 | 0.92052 | 1.00000 | |
| RegenerationTP | 0.451 | 3.49 | 0.58859 | 0.95439 |
Genes with expression patterns similar to MligTC455_50537
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50537 | 367 | 7.65 | Mlig455_051692 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.564/0.03047 |
TJAP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051692 {REF} {Length: 1381} {TRANSSPLICED} {Human: ENSG00000137221, TJAP1, tight junction associated protein 1, [RH, Score=53.1, Expect=2e-07]} {Dmel: FBgn0259224, CG42324, [RH, Score=78.6, Expect=3e-16]} {Smed: dd_Smed_v6_7904_0_1, dd_Smed_v6_7904_0_1, [RH, Score=105, Expect=8e-27]} {RNA1509_16465} {RNA1310_23318} {RNA815_12833.1} |
| 2. | MligTC455_41371 | 506 | 10.54 | Mlig455_040168 | Neo: Neoblast Age: - Region-enriched R4: 1.747/0.00943 |
NUDT21 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_040168 {REF} {Length: 1515} {TRANSSPLICED} {Pfam: Nucleotide hydrolase [PF13869.8, score=257.1]} {Human: ENSG00000167005, NUDT21, nudix hydrolase 21, [RH, Score=294, Expect=1e-101]} {Mouse: ENSMUSG00000031754, Nudt21, nudix (nucleoside diphosphate linked moiety X)-type motif 21, [RH, Score=293, Expect=8e-102]} {Dmel: FBgn0035987, CG3689, [RH, Score=287, Expect=4e-99]} {Celegans: WBGene00009668, cfim-1, Cleavage Factor IM (CFIm) homolog, [RH, Score=276, Expect=4e-95]} {Smed: dd_Smed_v6_4067_0_2, dd_Smed_v6_4067_0_2, [RH, Score=286, Expect=3e-99]} {RNA1509_32408} {RNA1310_18617} {RNA815_19534.1} |
| 3. | MligTC455_32255 | 1044 | 21.74 | Mlig455_044605 | Neo: Int S/G2/M Age: - |
SMARCB1 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_044605 {REF} {Length: 3572} {Pfam: SNF5 / SMARCB1 / INI1 [PF04855.14, score=191.9]} {Human: ENSG00000275837, SMARCB1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, [RH, Score=457, Expect=8e-161]; ENSG00000099956, SMARCB1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, [RH, Score=457, Expect=8e-161]} {Mouse: ENSMUSG00000000902, Smarcb1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, [RH, Score=457, Expect=5e-161]} {Dmel: FBgn0011715, Snr1, Snf5-related 1, [RH, Score=442, Expect=2e-155]} {Celegans: WBGene00011111, snfc-5, SNF chromatin remodeling Complex component, [RH, Score=358, Expect=2e-122]} {Smed: dd_Smed_v6_1963_0_1, dd_Smed_v6_1963_0_1, [RH, Score=473, Expect=4e-167]} {RNA1509_23547} {RNA1310_20933.1, RNA1509_23547} {RNA1509_23547, RNA815_8536} |
| 4. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 0.961 | - | - | - | - | - | 0.961 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
| 5. | MligTC455_48983 | 364 | 7.59 | Mlig455_006479 | Neo: - Age: - |
HEXB | 0.961 | - | - | - | - | - | 0.961 | Mlig455_006479 {REF} {Length: 4395} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=279.9]; beta-acetyl hexosaminidase like [PF14845.8, score=64.9]; Glycosyl hydrolase family 20, domain 2 [PF02838.17, score=25.4]} {Human: ENSG00000049860, HEXB, hexosaminidase subunit beta, [Score=404, Expect=3e-131]; ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=392, Expect=6e-127]} {Mouse: ENSMUSG00000021665, Hexb, hexosaminidase B, [Score=397, Expect=5e-129]; ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=393, Expect=1e-127]} {Dmel: FBgn0045063, fdl, fused lobes, [RH, Score=214, Expect=4e-59]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=313, Expect=1e-96]} {Smed: dd_Smed_v6_3964_0_1, dd_Smed_v6_3964_0_1, [RH, Score=477, Expect=1e-156]} {RNA1509_11107} {RNA1310_1997.1} {RNA815_5636} |
| 6. | MligTC455_48488 | 142 | 2.97 | Mlig455_019762 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.450/0.03622 |
TBC1D12 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_019762 {REF} {Length: 3903} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=150.6]} {Human: ENSG00000108239, TBC1D12, TBC1 domain family member 12, [RH, Score=313, Expect=2e-96]; ENSG00000132405, TBC1D14, TBC1 domain family member 14, [RH, Score=312, Expect=7e-97]} {Mouse: ENSMUSG00000048720, Tbc1d12, TBC1D12: TBC1 domain family, member 12, [RH, Score=311, Expect=8e-97]; ENSMUSG00000029192, Tbc1d14, TBC1 domain family, member 14, [RH, Score=308, Expect=3e-95]} {Dmel: FBgn0035879, GAPcenA, GTPase activating protein and centrosome-associated, [Score=99.0, Expect=4e-21]} {Celegans: WBGene00044061, tbc-12, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=266, Expect=8e-81]} {Smed: dd_Smed_v6_7827_0_1, dd_Smed_v6_7827_0_1, [RH, Score=261, Expect=1e-78]} {RNA1509_49497} {RNA1310_16549, RNA1509_49497} {RNA1509_49497, RNA815_3936.1} |
| 7. | MligTC455_14515 | 252 | 5.25 | Mlig455_061972 | Neo: - |
CCDC6 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_061972 {REF} {Length: 2316} {TRANSSPLICED} {tRNA: Thr(CGT),pseudo, score=29.6} {Pfam: Uncharacterized conserved protein H4 (DUF2046) [PF09755.11, score=323.4]} {Human: ENSG00000108091, CCDC6, coiled-coil domain containing 6, [Score=255, Expect=7e-81]} {Mouse: ENSMUSG00000048701, Ccdc6, coiled-coil domain containing 6, [Score=259, Expect=1e-82]} {Dmel: FBgn0036685, CG6664, [Score=214, Expect=6e-65]} {Celegans: WBGene00011645, T09B9.4, [RH, Score=92.4, Expect=2e-20]} {Smed: dd_Smed_v6_6765_0_1, dd_Smed_v6_6765_0_1, [Score=216, Expect=2e-66]} {RNA1509_15400, RNA1509_31621} {RNA1310_21441.1, RNA1509_15400, RNA1509_31621} {RNA1509_15400, RNA1509_31621, RNA815_7856.2} |
| 8. | MligTC455_33779 | 796 | 16.59 | Mlig455_016303 | Neo: Int S/G2/M Age: - |
SCFD1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_016303 {REF} {Length: 2821} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=368.0]} {Human: ENSG00000092108, SCFD1, sec1 family domain containing 1, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000020952, Scfd1, Sec1 family domain containing 1, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0264978, Slh, SLY-1 homologous, [RH, Score=561, Expect=0.0]} {Celegans: WBGene00009654, sly-1, SLY1 homolog, [RH, Score=514, Expect=6e-175]} {Smed: dd_Smed_v6_2992_0_1, dd_Smed_v6_2992_0_1, [RH, Score=562, Expect=0.0]} {RNA1509_9353} {RNA1310_11016.1, RNA1509_9353} {RNA1509_9353, RNA815_890.1} |
| 9. | MligTC455_49277 | 514 | 10.7 | Mlig455_064982, Mlig455_065419 | Neo: - Age: logFC(26M/2M)=0.570 |
GPATCH11 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_064982 {REF} {Length: 1242} {Pfam: Domain of unknown function (DUF4187) [PF13821.8, score=59.9]} {Human: ENSG00000152133, GPATCH11, G-patch domain containing 11, [Score=78.6, Expect=3e-17]} {Mouse: ENSMUSG00000050668, Gpatch11, G patch domain containing 11, [Score=74.7, Expect=5e-16]} {Dmel: FBgn0037490, CG10053, [Score=76.6, Expect=6e-17]} {Celegans: WBGene00011451, T04H1.5, [Score=52.0, Expect=4e-08]} {Smed: dd_Smed_v6_12850_0_1, dd_Smed_v6_12850_0_1, [Score=74.3, Expect=1e-16]} {RNA1509_45650} {RNA1310_21829} {RNA815_35843} Mlig455_065419 {REF} {Length: 1256} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4187) [PF13821.8, score=59.4]; G-patch domain [PF01585.25, score=40.9]} {Human: ENSG00000152133, GPATCH11, G-patch domain containing 11, [Score=105, Expect=3e-26]} {Mouse: ENSMUSG00000050668, Gpatch11, G patch domain containing 11, [Score=102, Expect=1e-25]} {Dmel: FBgn0037490, CG10053, [Score=105, Expect=4e-27]} {Celegans: WBGene00011451, T04H1.5, [Score=80.1, Expect=2e-17]} {Smed: dd_Smed_v6_12850_0_1, dd_Smed_v6_12850_0_1, [Score=105, Expect=2e-27]} {RNA1310_8301.3} {RNA815_35843} |
| 10. | MligTC455_50916 | 879 | 18.31 | Mlig455_028663, Mlig455_028694 | Neo: Irradiation Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_028663 {REF} {Length: 2888} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=97.7]} {Smed: dd_Smed_v6_12013_0_1, dd_Smed_v6_12013_0_1, [Score=64.7, Expect=7e-11]} {RNA1509_8219} {RNA1310_6966.1} {RNA815_1972.1} Mlig455_028694 {REF} {Length: 2675} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=95.3]} {Smed: dd_Smed_v6_12013_0_1, dd_Smed_v6_12013_0_1, [Score=66.2, Expect=2e-11]} {RNA1509_8219} {RNA1310_1428.1, RNA1509_8219} {RNA1509_8219, RNA815_1972.1} |
|
| 11. | MligTC455_34419 | 562 | 11.71 | Mlig455_055129 | Neo: - Age: Down-Down-Up |
ANK3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_055129 {REF} {Length: 4491} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=124.1]; Ankyrin repeats (many copies) [PF13637.8, score=105.9]; Ankyrin repeat [PF13606.8, score=89.2]; Ankyrin repeat [PF00023.32, score=80.3]; Ankyrin repeats (many copies) [PF13857.8, score=73.6]; Calponin homology (CH) domain [PF00307.33, score=24.8]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=114, Expect=1e-24]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=113, Expect=8e-25]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=116, Expect=9e-26]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=101, Expect=2e-21]} {Smed: dd_Smed_v6_10986_0_1, dd_Smed_v6_10986_0_1, [RH, Score=650, Expect=0.0]} {RNA1509_4310} {RNA1310_3592.1, RNA1509_4310} {RNA1509_4310, RNA815_588} |
Berezikov Lab - 2020-2021 © ERIBA