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Results for MligTC455_50618

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50618 1516 31.58 Mlig455_040294

Neo: -

Age: -

 SAFB Mlig455_040294 {REF} {Length: 3506} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.4]; SAP domain [PF02037.29, score=31.3]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=117, Expect=4e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=111, Expect=2e-24]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=95.1, Expect=1e-19]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=76.3, Expect=4e-14]} {RNA1509_4646} {RNA1310_3738.1} {RNA815_5498}

Cumulative graph for MligTC455_50618

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.451 5.119 0.57030 1.00000
RegionR2 -0.298 5.119 0.49214 0.87321
RegionR3 -0.111 5.119 0.75980 1.00000
RegionR4 0.401 5.119 0.33859 0.65808
RegionR5 0.643 5.119 0.04879 0.18430
RegionR6 -0.126 5.119 0.73420 1.00000
RegionR7 -0.138 5.119 0.75956 1.00000
RegionR8 -0.822 5.119 0.17114 0.74638

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.666 5.119 0.53096 1.00000
RegenerationR2 0.132 5.119 0.74722 0.97242
RegenerationR3 0.225 5.119 0.60520 0.91019
RegenerationR4 0.133 5.119 0.76535 0.97516
RegenerationR5 0.342 5.119 0.40890 0.80472
RegenerationR6 0.772 5.119 0.07459 0.34146
RegenerationBL 0.865 5.119 0.05045 0.25863
RegenerationTP 0.736 5.119 0.15105 0.57569


Genes with expression patterns similar to MligTC455_50618

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50618 1516 31.58 Mlig455_040294

Neo: -

Age: -

 SAFB 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040294 {REF} {Length: 3506} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.4]; SAP domain [PF02037.29, score=31.3]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=117, Expect=4e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=111, Expect=2e-24]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=95.1, Expect=1e-19]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=76.3, Expect=4e-14]} {RNA1509_4646} {RNA1310_3738.1} {RNA815_5498}
2. MligTC455_50619 1545 32.19 Mlig455_040307

Neo: -

Age: -

 SAFB 5.975 0.998 0.994 0.997 0.992 0.998 0.996 Mlig455_040307 {REF} {Length: 3646} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.3]; SAP domain [PF02037.29, score=32.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.9]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=113, Expect=4e-25]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=89.0, Expect=1e-17]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=75.5, Expect=7e-14]} {RNA1509_33772, RNA1509_36259, RNA1509_4646} {RNA1310_3738.1, RNA1509_33772, RNA1509_36259} {RNA1509_33772, RNA1509_36259, RNA815_5498}
3. MligTC455_49357 638 13.3 Mlig455_060321

Neo: -

Age: logFC(26M/2M)=-0.263

 FXR1 1.752 - 0.802 - - 0.950 - Mlig455_060321 {REF} {Length: 4230} {Pfam: KH domain [PF00013.31, score=33.2]} {Human: ENSG00000114416, FXR1, FMR1 autosomal homolog 1, [Score=126, Expect=5e-30]; ENSG00000102081, FMR1, fragile X mental retardation 1, [Score=120, Expect=5e-28]} {Mouse: ENSMUSG00000027680, Fxr1, fragile X mental retardation gene 1, autosomal homolog, [Score=128, Expect=8e-31]} {Dmel: FBgn0028734, Fmr1, [Score=110, Expect=8e-25]} {RNA1509_47363} {RNA1310_8295} {RNA815_8865}
4. MligTC455_18250 378 7.88 Mlig455_003174

Neo: -

Age: Down-Up-Up

 GDPGP1 0.97 - - - - 0.970 - Mlig455_003174 {REF} {Length: 1295} {TRANSSPLICED} {Human: ENSG00000183208, GDPGP1, GDP-D-glucose phosphorylase 1, [RH, Score=102, Expect=7e-24]} {Mouse: ENSMUSG00000050973, Gdpgp1, GDP-D-glucose phosphorylase 1, [RH, Score=112, Expect=2e-27]} {Dmel: FBgn0035999, CG3552, [RH, Score=94.7, Expect=3e-21]} {Celegans: WBGene00015678, mcp-1, GDP-D-glucose phosphorylase 1, [RH, Score=87.4, Expect=9e-19]} {Smed: dd_Smed_v6_14725_0_1, dd_Smed_v6_14725_0_1, [RH, Score=97.1, Expect=1e-22]} {RNA1509_18829, RNA1509_28338, RNA1509_45264} {RNA1310_11480, RNA1509_18829, RNA1509_28338, RNA1509_45264} {RNA1509_18829, RNA1509_28338, RNA1509_45264, RNA815_12039}
5. MligTC455_54219 1004 20.92 Mlig455_056207

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.346

Regeneration-upregulated R6: 1.561

Regeneration-enriched R6: 1.561

 NUP93 0.955 - - - - 0.955 - Mlig455_056207 {REF} {Length: 3132} {Pfam: Nup93/Nic96 [PF04097.16, score=370.6]} {Human: ENSG00000102900, NUP93, nucleoporin 93, [RH, Score=436, Expect=7e-140]} {Mouse: ENSMUSG00000032939, Nup93, nucleoporin 93, [RH, Score=440, Expect=1e-141]} {Dmel: FBgn0027537, Nup93-1, Nucleoporin 93kD-1, [RH, Score=295, Expect=4e-87]} {Smed: dd_Smed_v6_9207_0_1, dd_Smed_v6_9207_0_1, [RH, Score=318, Expect=8e-96]} {RNA1509_8355} {RNA1310_4739, RNA1509_8355} {RNA1509_8355, RNA815_23464}

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