Data search
Results for MligTC455_50619
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50619 | 1545 | 32.19 | Mlig455_040307 | Neo: - Age: - |
SAFB | Mlig455_040307 {REF} {Length: 3646} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.3]; SAP domain [PF02037.29, score=32.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.9]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=113, Expect=4e-25]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=89.0, Expect=1e-17]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=75.5, Expect=7e-14]} {RNA1509_33772, RNA1509_36259, RNA1509_4646} {RNA1310_3738.1, RNA1509_33772, RNA1509_36259} {RNA1509_33772, RNA1509_36259, RNA815_5498} |
Cumulative graph for MligTC455_50619
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.442 | 5.147 | 0.57803 | 1.00000 | |
| RegionR2 | -0.283 | 5.147 | 0.51704 | 0.89260 | |
| RegionR3 | -0.154 | 5.147 | 0.67438 | 1.00000 | |
| RegionR4 | 0.45 | 5.147 | 0.28690 | 0.59641 | |
| RegionR5 | 0.663 | 5.147 | 0.04419 | 0.17136 | |
| RegionR6 | -0.09 | 5.147 | 0.80819 | 1.00000 | |
| RegionR7 | -0.17 | 5.147 | 0.70740 | 1.00000 | |
| RegionR8 | -0.858 | 5.147 | 0.15413 | 0.71131 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.674 | 5.147 | 0.52651 | 1.00000 | |
| RegenerationR2 | 0.092 | 5.147 | 0.82407 | 0.99586 | |
| RegenerationR3 | 0.229 | 5.147 | 0.60389 | 0.90940 | |
| RegenerationR4 | 0.111 | 5.147 | 0.80598 | 0.98815 | |
| RegenerationR5 | 0.338 | 5.147 | 0.42087 | 0.81180 | |
| RegenerationR6 | 0.746 | 5.147 | 0.08699 | 0.36875 | |
| RegenerationBL | 0.926 | 5.147 | 0.03611 | 0.21432 | |
| RegenerationTP | 0.775 | 5.147 | 0.13195 | 0.54614 |
Genes with expression patterns similar to MligTC455_50619
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50619 | 1545 | 32.19 | Mlig455_040307 | Neo: - Age: - |
SAFB | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040307 {REF} {Length: 3646} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.3]; SAP domain [PF02037.29, score=32.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.9]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=113, Expect=4e-25]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=89.0, Expect=1e-17]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=75.5, Expect=7e-14]} {RNA1509_33772, RNA1509_36259, RNA1509_4646} {RNA1310_3738.1, RNA1509_33772, RNA1509_36259} {RNA1509_33772, RNA1509_36259, RNA815_5498} |
| 2. | MligTC455_50618 | 1516 | 31.58 | Mlig455_040294 | Neo: - Age: - |
SAFB | 5.975 | 0.998 | 0.994 | 0.997 | 0.992 | 0.998 | 0.996 | Mlig455_040294 {REF} {Length: 3506} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.4]; SAP domain [PF02037.29, score=31.3]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [RH, Score=117, Expect=4e-26]} {Mouse: ENSMUSG00000042625, Safb2, scaffold attachment factor B2, [RH, Score=111, Expect=2e-24]} {Dmel: FBgn0039229, Saf-B, Scaffold attachment factor B, [RH, Score=95.1, Expect=1e-19]} {Celegans: WBGene00004984, spn-4, PIP-1, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_3681_0_2, dd_Smed_v6_3681_0_2, [RH, Score=76.3, Expect=4e-14]} {RNA1509_4646} {RNA1310_3738.1} {RNA815_5498} |
| 3. | MligTC455_18250 | 378 | 7.88 | Mlig455_003174 | Neo: - Age: Down-Up-Up |
GDPGP1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_003174 {REF} {Length: 1295} {TRANSSPLICED} {Human: ENSG00000183208, GDPGP1, GDP-D-glucose phosphorylase 1, [RH, Score=102, Expect=7e-24]} {Mouse: ENSMUSG00000050973, Gdpgp1, GDP-D-glucose phosphorylase 1, [RH, Score=112, Expect=2e-27]} {Dmel: FBgn0035999, CG3552, [RH, Score=94.7, Expect=3e-21]} {Celegans: WBGene00015678, mcp-1, GDP-D-glucose phosphorylase 1, [RH, Score=87.4, Expect=9e-19]} {Smed: dd_Smed_v6_14725_0_1, dd_Smed_v6_14725_0_1, [RH, Score=97.1, Expect=1e-22]} {RNA1509_18829, RNA1509_28338, RNA1509_45264} {RNA1310_11480, RNA1509_18829, RNA1509_28338, RNA1509_45264} {RNA1509_18829, RNA1509_28338, RNA1509_45264, RNA815_12039} |
| 4. | MligTC455_54219 | 1004 | 20.92 | Mlig455_056207 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.346 Regeneration-upregulated R6: 1.561 Regeneration-enriched R6: 1.561 |
NUP93 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_056207 {REF} {Length: 3132} {Pfam: Nup93/Nic96 [PF04097.16, score=370.6]} {Human: ENSG00000102900, NUP93, nucleoporin 93, [RH, Score=436, Expect=7e-140]} {Mouse: ENSMUSG00000032939, Nup93, nucleoporin 93, [RH, Score=440, Expect=1e-141]} {Dmel: FBgn0027537, Nup93-1, Nucleoporin 93kD-1, [RH, Score=295, Expect=4e-87]} {Smed: dd_Smed_v6_9207_0_1, dd_Smed_v6_9207_0_1, [RH, Score=318, Expect=8e-96]} {RNA1509_8355} {RNA1310_4739, RNA1509_8355} {RNA1509_8355, RNA815_23464} |
| 5. | MligTC455_29688 | 2223 | 46.31 | Mlig455_041357 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.780 |
SRSF4 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_041357 {REF} {Length: 3846} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=97.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=183, Expect=2e-55]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=184, Expect=8e-55]} {Dmel: FBgn0004587, B52, [Score=155, Expect=3e-45]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=137, Expect=3e-39]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=166, Expect=6e-50]} {RNA1509_7126} {RNA1310_2750} {RNA815_11603} |
| 6. | MligTC455_35319 | 995 | 20.74 | Mlig455_038578 | Neo: - Age: - Region-enriched R4: 1.602/0.03291 |
ADHFE1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_038578 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: Iron-containing alcohol dehydrogenase [PF00465.21, score=346.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=53.3]; Periplasmic binding protein [PF13458.8, score=20.7]} {Human: ENSG00000147576, ADHFE1, alcohol dehydrogenase, iron containing 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000025911, Adhfe1, alcohol dehydrogenase, iron containing, 1, [RH, Score=516, Expect=0.0]} {Dmel: FBgn0017482, T3dh, Type III alcohol dehydrogenase, [RH, Score=495, Expect=3e-173]} {Celegans: WBGene00012608, hphd-1, Hydroxyacid-oxoacid transhydrogenase, mitochondrial, [RH, Score=448, Expect=8e-155]} {Smed: dd_Smed_v6_4554_0_2, dd_Smed_v6_4554_0_2, [RH, Score=498, Expect=2e-174]} {RNA1509_2515} {RNA1310_11167.2, RNA1509_2515} {RNA1509_2515, RNA815_5063} |
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