Data search
Results for MligTC455_50702
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50702 | 143 | 2.98 | Mlig455_019178 | Neo: - Age: - Region-enriched R5: 1.991/0.01349 |
Mlig455_019178 {REF} {Length: 2180} {TRANSSPLICED} {RNA1310_35794.1} {RNA815_23814} |
Cumulative graph for MligTC455_50702
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.406 | 2.354 | 0.21137 | 0.85087 | |
| RegionR2 | -0.198 | 2.354 | 0.87015 | 1.00000 | |
| RegionR3 | -0.506 | 2.354 | 0.93768 | 1.00000 | |
| RegionR4 | 1.215 | 2.354 | 0.19478 | 0.47254 | |
| RegionR5 | 1.991 | 2.354 | 0.00142 | 0.01349 | |
| RegionR6 | -0.275 | 2.354 | 0.89083 | 1.00000 | |
| RegionR7 | 0.899 | 2.354 | 0.35620 | 0.99282 | |
| RegionR8 | -5.532 | 2.354 | 0.05617 | 0.46266 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.471 | 2.354 | 0.19334 | 0.93154 | |
| RegenerationR2 | -0.146 | 2.354 | 0.79932 | 0.98976 | |
| RegenerationR3 | 0.475 | 2.354 | 0.52122 | 0.86729 | |
| RegenerationR4 | 0.034 | 2.354 | 0.96458 | 1.00000 | |
| RegenerationR5 | -0.742 | 2.354 | 0.16835 | 0.59524 | |
| RegenerationR6 | 0.139 | 2.354 | 0.85936 | 1.00000 | |
| RegenerationBL | 1.248 | 2.354 | 0.42170 | 0.79003 | |
| RegenerationTP | 2.689 | 2.354 | 0.14778 | 0.57152 |
Genes with expression patterns similar to MligTC455_50702
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50702 | 143 | 2.98 | Mlig455_019178 | Neo: - Age: - Region-enriched R5: 1.991/0.01349 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019178 {REF} {Length: 2180} {TRANSSPLICED} {RNA1310_35794.1} {RNA815_23814} | |
| 2. | MligTC455_06466 | 61 | 1.27 | Mlig455_023837 | Neo: - Age: - |
RNF44 | 1.766 | - | - | - | 0.815 | - | 0.951 | Mlig455_023837 {REF} {Length: 2513} {Pfam: Ring finger domain [PF13639.8, score=43.6]; RING-H2 zinc finger domain [PF12678.9, score=31.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=29.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Prokaryotic RING finger family 1 [PF14446.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=25.5]; RING-like zinc finger [PF17123.7, score=24.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.3]} {Human: ENSG00000146083, RNF44, ring finger protein 44, [Score=51.2, Expect=2e-07]; ENSG00000137075, RNF38, ring finger protein 38, [Score=50.4, Expect=5e-07]; ENSG00000183763, TRAIP, TRAF interacting protein, [Score=50.1, Expect=6e-07]; ENSG00000163162, RNF149, ring finger protein 149, [Score=49.7, Expect=8e-07]; ENSG00000170153, RNF150, ring finger protein 150, [Score=49.7, Expect=7e-07]} {Mouse: ENSMUSG00000035696, Rnf38, ring finger protein 38, [Score=51.2, Expect=2e-07]; ENSMUSG00000032586, Traip, TRAF-interacting protein, [Score=50.1, Expect=4e-07]; ENSMUSG00000034928, Rnf44, ring finger protein 44, [Score=50.1, Expect=4e-07]; ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=49.7, Expect=7e-07]; ENSMUSG00000048234, Rnf149, ring finger protein 149, [Score=49.7, Expect=6e-07]} {Dmel: FBgn0037705, mura, murashka, [Score=50.1, Expect=4e-07]} {Celegans: WBGene00017144, brap-2, BRCA1-associated protein homolog 2, [Score=45.1, Expect=1e-05]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=48.5, Expect=7e-07]} {RNA1509_59869} {RNA1310_85762} |
| 3. | MligTC455_36982 | 50 | 1.04 | Mlig455_043216, Mlig455_050309, Mlig455_050323 | Neo: - Age: Up-Down-Up Region-enriched R5: 2.762/0.03145 |
ASIC5 | 0.962 | - | 0.962 | - | - | - | - | Mlig455_043216 {REF} {Length: 1744} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {RNA1310_74896.2} {RNA815_61773} Mlig455_050309 {REF} {Length: 1910} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=93.5]; Kringle domain [PF00051.20, score=20.7]} {RNA1310_19910} {RNA815_51153} Mlig455_050323 {REF} {Length: 3233} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=158.8]; Kringle domain [PF00051.20, score=20.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=57.8, Expect=7e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=50.8, Expect=6e-06]} {Smed: dd_Smed_v6_16557_0_1, dd_Smed_v6_16557_0_1, [Score=54.3, Expect=2e-07]} {RNA1310_9846.1} {RNA815_21595} |
| 4. | MligTC455_09366 | 315 | 6.57 | Mlig455_004649 | Neo: - Age: Down-Down-Up |
0.955 | - | - | - | 0.955 | - | - | Mlig455_004649 {REF} {Length: 2502} {Pfam: Ring finger domain [PF13639.8, score=34.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.5]; RING-type zinc-finger [PF13445.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]} {RNA1509_34007} {RNA1310_15024} {RNA815_7070} | |
| 5. | MligTC455_18029 | 459 | 9.55 | Mlig455_006976 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_006976 {REF} {Length: 595} {NoTransDecoderORF} {RNA1310_56472} {RNA815_14182.2} | |
| 6. | MligTC455_45612 | 653 | 13.6 | Mlig455_036737 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.303/0.00285 |
IQCJ-SCHIP1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_036737 {REF} {Length: 1932} {Pfam: Schwannomin-interacting protein 1 [PF10148.11, score=86.1]} {Human: ENSG00000283154, IQCJ-SCHIP1, IQCJ-SCHIP1 readthrough, [Score=79.7, Expect=1e-15]; ENSG00000151967, SCHIP1, schwannomin interacting protein 1, [Score=77.0, Expect=2e-15]} {Mouse: ENSMUSG00000027777, Schip1, schwannomin interacting protein 1, [Score=79.7, Expect=6e-16]; ENSMUSG00000102422, Iqschfp, Iqcj and Schip1 fusion protein, [Score=79.3, Expect=1e-15]} {RNA1509_35016, RNA1509_51314} {RNA1310_17423, RNA1509_35016, RNA1509_51314} {RNA1509_35016, RNA1509_51314, RNA815_5805} |
| 7. | MligTC455_45804 | 413 | 8.6 | Mlig455_045723 | Neo: - Age: - |
PPP6R3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_045723 {REF} {Length: 5156} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=107.2]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [Score=217, Expect=3e-59]} {Mouse: ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [Score=213, Expect=6e-58]} {Dmel: FBgn0035688, CG10289, [Score=144, Expect=3e-35]} {Smed: dd_Smed_v6_2815_0_1, dd_Smed_v6_2815_0_1, [RH, Score=93.2, Expect=1e-19]} {RNA1509_32046, RNA1509_9157} {RNA1310_6345, RNA1509_32046, RNA1509_9157} {RNA1509_32046, RNA1509_9157, RNA815_1354} |
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