Data search
Results for MligTC455_50706
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50706 | 86 | 1.80 | Mlig455_009216 | Neo: - Age: - |
Mlig455_009216 {REF} {Length: 1919} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=50.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=44.1]; SF3a60/Prp9 C-terminal [PF11931.10, score=30.6]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.9]; DBF zinc finger [PF07535.14, score=20.8]} {RNA1509_37337} {RNA1310_15898.1, RNA1509_37337} {RNA1509_37337, RNA815_6354} |
Cumulative graph for MligTC455_50706
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.397 | 2.012 | 0.45046 | 1.00000 | |
| RegionR2 | 0.997 | 2.012 | 0.50749 | 0.88572 | |
| RegionR3 | 1.268 | 2.012 | 0.25535 | 0.79945 | |
| RegionR4 | 0.457 | 2.012 | 0.69852 | 0.98748 | |
| RegionR5 | 0.399 | 2.012 | 0.71523 | 1.00000 | |
| RegionR6 | 0.832 | 2.012 | 0.50381 | 1.00000 | |
| RegionR7 | -0.148 | 2.012 | 0.91259 | 1.00000 | |
| RegionR8 | 0.593 | 2.012 | 0.71044 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.33 | 2.012 | 0.99977 | 1.00000 | |
| RegenerationR2 | 0.388 | 2.012 | 0.73089 | 0.96593 | |
| RegenerationR3 | 0.313 | 2.012 | 0.74372 | 0.96198 | |
| RegenerationR4 | 0.667 | 2.012 | 0.58873 | 0.90830 | |
| RegenerationR5 | 1.324 | 2.012 | 0.15458 | 0.57459 | |
| RegenerationR6 | 0.462 | 2.012 | 0.64902 | 0.89785 | |
| RegenerationBL | -2.638 | 2.012 | 0.34137 | 0.70795 | |
| RegenerationTP | 0.24 | 2.012 | 0.90710 | 1.00000 |
Genes with expression patterns similar to MligTC455_50706
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50706 | 86 | 1.8 | Mlig455_009216 | Neo: - Age: - |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_009216 {REF} {Length: 1919} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=50.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=44.1]; SF3a60/Prp9 C-terminal [PF11931.10, score=30.6]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.9]; DBF zinc finger [PF07535.14, score=20.8]} {RNA1509_37337} {RNA1310_15898.1, RNA1509_37337} {RNA1509_37337, RNA815_6354} | |
| 2. | MligTC455_15251 | 45 | 0.94 | Mlig455_044383 | Neo: Irradiation Age: - Region-enriched R5: 4.521/0.00071 |
GRIK3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_044383 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: Ligand-gated ion channel [PF00060.28, score=101.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=87.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.8]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=177, Expect=2e-46]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=169, Expect=1e-43]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=176, Expect=5e-46]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=169, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=246, Expect=8e-71]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=333, Expect=3e-103]} {RNA1310_10585} {RNA815_25648} |
| 3. | MligTC455_15473 | 216 | 4.51 | Mlig455_063690 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.405 Region-enriched R5: 2.689/0.00003 |
CHEK1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_063690 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=1e-61]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=2e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170} {RNA1310_7988} {RNA815_13053} |
| 4. | MligTC455_46914 | 423 | 8.82 | Mlig455_060252 | Neo: Irradiation Age: - |
NOTCH3 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_060252 {REF} {Length: 3099} {Pfam: EGF-like domain [PF00008.29, score=49.3]; Calcium-binding EGF domain [PF07645.17, score=39.7]; Human growth factor-like EGF [PF12661.9, score=29.8]; EGF domain [PF12947.9, score=25.8]; EGF-like domain [PF07974.15, score=23.7]} {Human: ENSG00000074181, NOTCH3, notch 3, [Score=86.3, Expect=7e-17]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=82.4, Expect=7e-16]} {Dmel: FBgn0051665, wry, weary, [Score=95.5, Expect=3e-20]} {Celegans: WBGene00001609, glp-1, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=115, Expect=1e-27]} {RNA1509_21381} {RNA1310_11756, RNA1509_21381} {RNA1509_21381, RNA815_17372.1} |
| 5. | MligTC455_13921 | 220 | 4.58 | Mlig455_045722 | Neo: - Age: - Region-enriched R6: 3.243/0.00161 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_045722 {REF} {Length: 1184} {NoTransDecoderORF} {RNA1509_45086} {RNA1310_33791, RNA1509_45086} {RNA1509_45086, RNA815_26629.1} | |
| 6. | MligTC455_23469 | 443 | 9.24 | Mlig455_028370, Mlig455_068830 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_028370 {REF} {Length: 3100} {Pfam: Ribosomal protein S31e [PF17067.7, score=20.5]} {RNA1509_25511, RNA1509_48699} {RNA1310_13694, RNA1509_48699} {RNA1509_48699, RNA815_7126.1} Mlig455_068830 {REF} {Length: 3621} {RNA1509_25511} {RNA1310_13694, RNA1509_25511} {RNA1509_25511, RNA815_7126.1} |
|
| 7. | MligTC455_31438 | 914 | 19.05 | Mlig455_055586, Mlig455_055593, Mlig455_055620 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_055586 {REF} {Length: 444} {NoTransDecoderORF} {RNA1509_56146} {RNA1310_25560, RNA1509_56146} {RNA1509_56146, RNA815_48750} Mlig455_055593 {REF} {Length: 1084} {RNA1509_56146} {RNA1310_25560} {RNA815_19080.1} Mlig455_055620 {REF} {Length: 782} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56146} {RNA1310_25560} {RNA815_48750} |
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