TomoSeq data search

Data search

Results for MligTC455_50756

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50756

5508

114.76

Mlig455_019794, Mlig455_051972

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.202

TBCA

Mlig455_019794 {REF} {Length: 1653} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=94.9]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=82.0, Expect=9e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=84.7, Expect=3e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=68.2, Expect=5e-16]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=80.9, Expect=3e-21]} {RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1310_47950.1, RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1509_15473, RNA1509_27862, RNA1509_40575, RNA815_23908}

Mlig455_051972 {REF} {Length: 1364} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=96.5]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=83.2, Expect=3e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=83.6, Expect=9e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=67.0, Expect=2e-15]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=82.0, Expect=2e-21]} {RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1310_47950.1, RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1509_12801, RNA1509_14799, RNA1509_6452, RNA815_13176.1}

Cumulative graph for MligTC455_50756

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.601	6.96	0.17302	0.79867
RegionR2	0.174	6.96	0.44164	0.83076
RegionR3	0.422	6.96	0.02137	0.24637
RegionR4	0.387	6.96	0.08397	0.27378
RegionR5	0.214	6.96	0.22529	0.52927
RegionR6	0.016	6.96	0.93104	1.00000
RegionR7	-0.027	6.96	0.89700	1.00000
RegionR8	-0.586	6.96	0.02235	0.29148

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.369	6.96	0.54509	1.00000
RegenerationR2	-0.045	6.96	0.83851	1.00000
RegenerationR3	-0.365	6.96	0.12014	0.53831
RegenerationR4	-0.358	6.96	0.13819	0.55925
RegenerationR5	-0.013	6.96	0.95555	1.00000
RegenerationR6	-0.241	6.96	0.31283	0.66036
RegenerationBL	-0.016	6.96	0.94937	1.00000
RegenerationTP	0.177	6.96	0.50259	0.90228

Genes with expression patterns similar to MligTC455_50756

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50756	5508	114.76	Mlig455_019794, Mlig455_051972	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.202	TBCA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019794 {REF} {Length: 1653} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=94.9]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=82.0, Expect=9e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=84.7, Expect=3e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=68.2, Expect=5e-16]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=80.9, Expect=3e-21]} {RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1310_47950.1, RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1509_15473, RNA1509_27862, RNA1509_40575, RNA815_23908} Mlig455_051972 {REF} {Length: 1364} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=96.5]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=83.2, Expect=3e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=83.6, Expect=9e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=67.0, Expect=2e-15]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=82.0, Expect=2e-21]} {RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1310_47950.1, RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1509_12801, RNA1509_14799, RNA1509_6452, RNA815_13176.1}
2.	MligTC455_22094	1659	34.57	Mlig455_062925	Neo: - Age: logFC(26M/2M)=-0.183	KIF3B	2.407	-	-	-	0.700	0.747	0.960	Mlig455_062925 {REF} {Length: 3508} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=402.9]; Microtubule binding [PF16796.7, score=88.6]} {Human: ENSG00000101350, KIF3B, kinesin family member 3B, [RH, Score=819, Expect=0.0]} {Mouse: ENSMUSG00000027475, Kif3b, kinesin family member 3B, [RH, Score=821, Expect=0.0]} {Dmel: FBgn0004381, Klp68D, Kinesin-like protein at 68D, [Score=548, Expect=0.0]} {Celegans: WBGene00002222, klp-11, Kinesin-like protein, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_9308_0_1, dd_Smed_v6_9308_0_1, [RH, Score=530, Expect=0.0]} {RNA1509_2170} {RNA1310_8600} {RNA815_11642}
3.	MligTC455_46688	341	7.11	Mlig455_064370	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.736		0.963	-	-	-	-	0.963	-	Mlig455_064370 {REF} {Length: 4139} {Pfam: MspA [PF09203.13, score=39.4]} {RNA1509_20808, RNA1509_25060} {RNA1310_2880, RNA1509_20808} {RNA1509_20808, RNA815_15411}
4.	MligTC455_41264	463	9.64	Mlig455_011696	Neo: - Age: Up-Down-Up	ABR	0.956	-	-	-	-	-	0.956	Mlig455_011696 {REF} {Length: 7031} {Pfam: RhoGAP domain [PF00620.29, score=109.0]; PH domain [PF19057.2, score=25.5]} {Human: ENSG00000159842, ABR, ABR, RhoGEF and GTPase activating protein, [Score=171, Expect=8e-43]; ENSG00000278741, ABR, ABR, RhoGEF and GTPase activating protein, [Score=171, Expect=8e-43]; ENSG00000276016, ABR, ABR, RhoGEF and GTPase activating protein, [Score=169, Expect=2e-42]} {Mouse: ENSMUSG00000017631, Abr, active BCR-related gene, [Score=170, Expect=1e-42]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=189, Expect=1e-48]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [Score=87.4, Expect=3e-17]} {Smed: dd_Smed_v6_4507_0_1, dd_Smed_v6_4507_0_1, [Score=152, Expect=2e-37]} {RNA1509_19212} {RNA1310_10127, RNA1509_19212} {RNA1509_19212, RNA815_6903.1}
5.	MligTC455_44047	834	17.37	Mlig455_013992	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.621	SLC6A2	0.954	-	-	-	-	-	0.954	Mlig455_013992 {REF} {Length: 3099} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=718.1]} {Human: ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [RH, Score=632, Expect=0.0]; ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [RH, Score=611, Expect=0.0]; ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [RH, Score=611, Expect=0.0]} {Mouse: ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [RH, Score=629, Expect=0.0]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [RH, Score=620, Expect=0.0]; ENSMUSG00000020838, Slc6a4, solute carrier family 6 (neurotransmitter transporter, serotonin), member 4, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0034136, DAT, Dopamine transporter, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [RH, Score=620, Expect=0.0]} {Smed: dd_Smed_v6_17986_0_1, dd_Smed_v6_17986_0_1, [RH, Score=771, Expect=0.0]} {RNA1509_10666} {RNA1310_15942} {RNA815_3113}
6.	MligTC455_46778	9506	198.05	Mlig455_013214, Mlig455_013237, Mlig455_013309	Neo: - Age: Down-Up-Up	ELOC	0.953	-	-	-	0.953	-	-	Mlig455_013214 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1} Mlig455_013237 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1310_27905.1, RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749, RNA815_12243.1} Mlig455_013309 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1}
7.	MligTC455_47061	614	12.8	Mlig455_050824	Neo: - Age: -	TROVE2	0.952	-	-	-	-	-	0.952	Mlig455_050824 {REF} {Length: 3666} {TRANSSPLICED} {Pfam: TROVE domain [PF05731.13, score=150.3]} {Human: ENSG00000116747, TROVE2, TROVE domain family member 2, [RH, Score=429, Expect=3e-144]} {Mouse: ENSMUSG00000018199, Trove2, TROVE domain family, member 2, [RH, Score=436, Expect=3e-147]} {Celegans: WBGene00004405, rop-1, 60 kDa SS-A/Ro ribonucleoprotein homolog, [RH, Score=383, Expect=2e-125]} {RNA1509_26337} {RNA1310_12640.1, RNA1509_26337} {RNA1509_26337, RNA815_4560.1}
8.	MligTC455_52132	885	18.44	Mlig455_025436	Neo: - Age: Down-Up-Down	TMEM115	0.95	-	-	-	-	-	0.950	Mlig455_025436 {REF} {Length: 2431} {tRNA: Val(CAC),pseudo, score=41.1} {Human: ENSG00000126062, TMEM115, transmembrane protein 115, [Score=62.8, Expect=2e-11]} {Mouse: ENSMUSG00000010045, Tmem115, transmembrane protein 115, [Score=61.2, Expect=4e-11]} {Dmel: FBgn0031818, CG9536, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_2967_0_1, dd_Smed_v6_2967_0_1, [Score=70.9, Expect=8e-15]} {RNA1509_9371} {RNA1310_13090.1} {RNA815_17256}

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