TomoSeq data search

Data search

Results for MligTC455_46778

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46778

9506

198.05

Mlig455_013214, Mlig455_013237, Mlig455_013309

Neo: -

Age: Down-Up-Up

ELOC

Mlig455_013214 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1}

Mlig455_013237 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1310_27905.1, RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749, RNA815_12243.1}

Mlig455_013309 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1}

Cumulative graph for MligTC455_46778

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.305	7.759	0.45697	1.00000
RegionR2	0.195	7.759	0.47669	0.86150
RegionR3	0.178	7.759	0.44994	0.96167
RegionR4	0.576	7.759	0.02993	0.13572
RegionR5	-0.087	7.759	0.70961	1.00000
RegionR6	-0.229	7.759	0.34229	0.92918
RegionR7	-0.209	7.759	0.39708	1.00000
RegionR8	-0.119	7.759	0.66672	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.661	7.759	0.25312	0.96710
RegenerationR2	-0.239	7.759	0.41466	0.82350
RegenerationR3	-0.418	7.759	0.17155	0.60666
RegenerationR4	-0.704	7.759	0.02345	0.24581
RegenerationR5	-0.11	7.759	0.71328	0.95693
RegenerationR6	-0.333	7.759	0.27755	0.62688
RegenerationBL	-0.704	7.759	0.01580	0.13272
RegenerationTP	0.489	7.759	0.09528	0.48389

Genes with expression patterns similar to MligTC455_46778

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46778	9506	198.05	Mlig455_013214, Mlig455_013237, Mlig455_013309	Neo: - Age: Down-Up-Up	ELOC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013214 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1} Mlig455_013237 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1310_27905.1, RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749, RNA815_12243.1} Mlig455_013309 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1}
2.	MligTC455_25671	1688	35.17	Mlig455_003489	Neo: - Age: - Region-enriched R4: 1.264/0.00364	SLC15A1	0.974	-	-	-	-	-	0.974	Mlig455_003489 {REF} {Length: 5181} {TRANSSPLICED} {Pfam: POT family [PF00854.23, score=324.4]} {Human: ENSG00000088386, SLC15A1, solute carrier family 15 member 1, [RH, Score=424, Expect=8e-138]; ENSG00000163406, SLC15A2, solute carrier family 15 member 2, [RH, Score=405, Expect=2e-130]} {Mouse: ENSMUSG00000022899, Slc15a2, solute carrier family 15 (H+/peptide transporter), member 2, [RH, Score=431, Expect=6e-140]; ENSMUSG00000025557, Slc15a1, solute carrier family 15 (oligopeptide transporter), member 1, [RH, Score=429, Expect=8e-140]} {Dmel: FBgn0028491, CG2930, [RH, Score=429, Expect=6e-139]} {Celegans: WBGene00003876, pept-2, Peptide transporter family 2, [RH, Score=333, Expect=1e-102]} {Smed: dd_Smed_v6_6994_0_1, dd_Smed_v6_6994_0_1, [RH, Score=354, Expect=3e-111]} {RNA1509_5186} {RNA1310_7848} {RNA815_2366.1}
3.	MligTC455_44545	600	12.5	Mlig455_058204	Neo: - Age: Down-Up-Down Region-enriched R4: 1.212/0.01426 Region-enriched R5: 1.192/0.00067	PPP2R3C	0.962	-	-	-	0.962	-	-	Mlig455_058204 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=44.6]; EF-hand domain [PF13405.8, score=34.0]; EF-hand domain [PF17958.3, score=28.6]; EF hand [PF00036.34, score=21.8]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [RH, Score=569, Expect=0.0]} {Dmel: FBgn0038744, CG4733, [Score=131, Expect=2e-32]} {Celegans: WBGene00007710, rsa-1, Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1, [RH, Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_19511, RNA1509_7728} {RNA1310_13100.1, RNA1509_19511, RNA1509_7728} {RNA1509_19511, RNA1509_7728, RNA815_4481}
4.	MligTC455_43970	595	12.39	Mlig455_055475	Neo: - Age: -	CNBP	0.96	-	-	-	-	-	0.960	Mlig455_055475 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=152.7]; Zinc knuckle [PF14392.8, score=40.9]; GAG-polyprotein viral zinc-finger [PF14787.8, score=31.5]; Zinc knuckle [PF13917.8, score=22.9]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=91.7, Expect=9e-23]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [RH, Score=91.7, Expect=6e-23]} {Dmel: FBgn0034802, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=80.5, Expect=7e-19]} {Celegans: WBGene00019537, K08D12.3, [Score=62.0, Expect=3e-12]} {Smed: dd_Smed_v6_947_0_1, dd_Smed_v6_947_0_1, [RH, Score=115, Expect=2e-32]} {RNA1509_36940, RNA1509_42112} {RNA1310_29194, RNA1509_36940, RNA1509_42112} {RNA1509_36940, RNA1509_42112, RNA815_13634}
5.	MligTC455_40607	3087	64.31	Mlig455_023874, Mlig455_046507, Mlig455_046608, Mlig455_070492	Neo: Germline Age: - Region-enriched R4: 1.892/0.01620	GOPC	0.955	-	-	-	0.955	-	-	Mlig455_023874 {REF} {Length: 3952} {Pfam: PDZ domain [PF00595.26, score=55.9]; PDZ domain [PF17820.3, score=24.5]; PDZ domain [PF13180.8, score=19.6]} {Human: ENSG00000047932, GOPC, golgi associated PDZ and coiled-coil motif containing, [RH, Score=403, Expect=7e-137]} {Mouse: ENSMUSG00000019861, Gopc, golgi associated PDZ and coiled-coil motif containing, [RH, Score=398, Expect=3e-135]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=78.2, Expect=5e-15]} {Celegans: WBGene00014101, gopc-1, GOlgi-associated PDZ and Coiled-coil motif protein, [RH, Score=344, Expect=5e-115]} {Smed: dd_Smed_v6_5968_0_1, dd_Smed_v6_5968_0_1, [RH, Score=313, Expect=6e-103]} {RNA1509_38612, RNA1509_4936} {RNA1310_9131, RNA1509_38612} {RNA1509_38612, RNA815_4088} Mlig455_046507 {REF} {Length: 3073} {Pfam: PDZ domain [PF00595.26, score=56.1]; PDZ domain [PF17820.3, score=24.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000047932, GOPC, golgi associated PDZ and coiled-coil motif containing, [Score=330, Expect=3e-109]} {Mouse: ENSMUSG00000019861, Gopc, golgi associated PDZ and coiled-coil motif containing, [Score=327, Expect=1e-108]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=78.6, Expect=3e-15]} {Celegans: WBGene00014101, gopc-1, GOlgi-associated PDZ and Coiled-coil motif protein, [Score=282, Expect=1e-91]} {Smed: dd_Smed_v6_5968_0_1, dd_Smed_v6_5968_0_1, [Score=271, Expect=1e-87]} {RNA1509_4936} {RNA1310_9131} {RNA815_4088} Mlig455_046608 {REF} {Length: 2795} {Pfam: PDZ domain [PF00595.26, score=56.1]; PDZ domain [PF17820.3, score=24.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000047932, GOPC, golgi associated PDZ and coiled-coil motif containing, [Score=330, Expect=3e-109]} {Mouse: ENSMUSG00000019861, Gopc, golgi associated PDZ and coiled-coil motif containing, [Score=327, Expect=1e-108]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=78.6, Expect=3e-15]} {Celegans: WBGene00014101, gopc-1, GOlgi-associated PDZ and Coiled-coil motif protein, [Score=282, Expect=1e-91]} {Smed: dd_Smed_v6_5968_0_1, dd_Smed_v6_5968_0_1, [Score=271, Expect=1e-87]} {RNA1509_4936} {RNA1310_9131} {RNA815_4088} Mlig455_070492 {REF} {Length: 3617} {Pfam: PDZ domain [PF00595.26, score=55.8]; PDZ domain [PF17820.3, score=24.6]; PDZ domain [PF13180.8, score=19.6]} {Human: ENSG00000047932, GOPC, golgi associated PDZ and coiled-coil motif containing, [RH, Score=402, Expect=1e-136]} {Mouse: ENSMUSG00000019861, Gopc, golgi associated PDZ and coiled-coil motif containing, [RH, Score=398, Expect=4e-135]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=78.2, Expect=4e-15]} {Celegans: WBGene00014101, gopc-1, GOlgi-associated PDZ and Coiled-coil motif protein, [RH, Score=344, Expect=4e-115]} {Smed: dd_Smed_v6_5968_0_1, dd_Smed_v6_5968_0_1, [RH, Score=313, Expect=5e-103]} {RNA1509_4936} {RNA1310_9131} {RNA815_4088}
6.	MligTC455_50756	5508	114.76	Mlig455_019794, Mlig455_051972	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.202	TBCA	0.953	-	-	-	0.953	-	-	Mlig455_019794 {REF} {Length: 1653} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=94.9]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=82.0, Expect=9e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=84.7, Expect=3e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=68.2, Expect=5e-16]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=80.9, Expect=3e-21]} {RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1310_47950.1, RNA1509_15473, RNA1509_27862, RNA1509_40575} {RNA1509_15473, RNA1509_27862, RNA1509_40575, RNA815_23908} Mlig455_051972 {REF} {Length: 1364} {TRANSSPLICED} {Pfam: Tubulin binding cofactor A [PF02970.18, score=96.5]} {Human: ENSG00000171530, TBCA, tubulin folding cofactor A, [RH, Score=83.2, Expect=3e-21]} {Mouse: ENSMUSG00000042043, Tbca, tubulin cofactor A, [RH, Score=83.6, Expect=9e-22]} {Dmel: FBgn0039869, CG1890, [RH, Score=67.0, Expect=2e-15]} {Smed: dd_Smed_v6_231_0_1, dd_Smed_v6_231_0_1, [RH, Score=82.0, Expect=2e-21]} {RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1310_47950.1, RNA1509_12801, RNA1509_14799, RNA1509_6452} {RNA1509_12801, RNA1509_14799, RNA1509_6452, RNA815_13176.1}

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