TomoSeq data search

Data search

Results for MligTC455_50848

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50848	30	0.62	Mlig455_025590	Neo: - Age: -		Mlig455_025590 {REF} {Length: 1790} {RNA1310_61983} {RNA815_39354}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50848

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.734	0.803	0.99962	1.00000
RegionR2	1.359	0.803	0.63279	0.97292
RegionR3	1.023	0.803	0.60143	1.00000
RegionR4	1.01	0.803	0.70992	0.99557
RegionR5	0.159	0.803	0.78232	1.00000
RegionR6	0.604	0.803	0.71837	1.00000
RegionR7	-1.149	0.803	0.99989	1.00000
RegionR8	-1.272	0.803	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.263	0.803	1.00000	1.00000
RegenerationR2	1.484	0.803	0.68610	0.95120
RegenerationR3	0.683	0.803	0.79287	0.98001
RegenerationR4	1.71	0.803	0.64988	0.93346
RegenerationR5	-0.961	0.803	0.53501	0.87685
RegenerationR6	1.725	0.803	0.59840	0.86771
RegenerationBL	4.834	0.803	0.17196	0.49719
RegenerationTP	3.135	0.803	0.41449	0.83990

Genes with expression patterns similar to MligTC455_50848

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50848	30	0.62	Mlig455_025590	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_025590 {REF} {Length: 1790} {RNA1310_61983} {RNA815_39354}
2.	MligTC455_54100	57	1.18	Mlig455_036019, Mlig455_036108	Neo: - Age: -	ANGPTL2	1.796	-	-	-	0.840	0.956	-	Mlig455_036019 {REF} {Length: 1076} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=137.0]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=121, Expect=3e-34]; ENSG00000160339, FCN2, ficolin 2, [Score=119, Expect=7e-33]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=117, Expect=9e-31]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=122, Expect=2e-32]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=121, Expect=3e-32]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=116, Expect=2e-30]} {Dmel: FBgn0003326, sca, scabrous, [Score=112, Expect=1e-28]} {Celegans: WBGene00017013, ensh-1, [Score=48.9, Expect=5e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=114, Expect=1e-29]} {RNA1509_26827} {RNA1310_31840} {RNA815_17173.1} Mlig455_036108 {REF} {Length: 1344} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=152.2]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=2e-34]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=133, Expect=4e-34]; ENSG00000160339, FCN2, ficolin 2, [Score=132, Expect=9e-35]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [Score=129, Expect=1e-32]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=137, Expect=1e-35]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=134, Expect=2e-34]} {Dmel: FBgn0003326, sca, scabrous, [RH, Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=47.4, Expect=8e-07]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}
3.	MligTC455_24750	196	4.09	Mlig455_016682	Neo: Int S/G2/M Age: Up-Down-Down		1.651	-	-	-	0.700	0.951	-	Mlig455_016682 {REF} {Length: 2372} {TRANSSPLICED} {RNA1509_16225, RNA1509_50867} {RNA1310_1264.1, RNA1509_50867} {RNA1509_50867, RNA815_3978.1}
4.	MligTC455_24919	8	0.17	Mlig455_011387	Neo: - Age: -		0.989	-	-	-	-	0.989	-	Mlig455_011387 {REF} {Length: 977} {NoTransDecoderORF} {RNA1310_88183}
5.	MligTC455_11636	7	0.15	Mlig455_067475	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_067475 {REF} {Length: 565} {NoTransDecoderORF} {RNA1509_26331} {RNA1310_7323} {RNA815_2947}
6.	MligTC455_36762	10	0.21	Mlig455_057461	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_057461 {REF} {Length: 1806} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=24.8]} {Smed: dd_Smed_v6_38501_0_1, dd_Smed_v6_38501_0_1, [Score=155, Expect=6e-43]}
7.	MligTC455_53072	27	0.57	Mlig455_059541	Neo: - Age: -	CASK	0.969	-	-	-	-	0.969	-	Mlig455_059541 {REF} {Length: 5770} {Pfam: Guanylate kinase [PF00625.23, score=201.8]; Protein kinase domain [PF00069.27, score=148.2]; L27 domain [PF02828.18, score=62.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=62.1]; PDZ domain [PF00595.26, score=57.5]; PDZ domain [PF17820.3, score=24.4]; Variant SH3 domain [PF07653.19, score=23.4]; SH3 domain [PF00018.30, score=21.9]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [Score=1063, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=1063, Expect=0.0]} {Dmel: FBgn0013759, CASK, [Score=890, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [Score=738, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [RH, Score=1149, Expect=0.0]} {RNA1509_13322} {RNA1310_1798.2} {RNA815_14711}
8.	MligTC455_17809	89	1.85	Mlig455_066801, Mlig455_066865	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_066801 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.4]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.2, Expect=3e-06]} {RNA1310_22785} {RNA815_13697} Mlig455_066865 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.2]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.6, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}
9.	MligTC455_33725	46	0.96	Mlig455_059862	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
10.	MligTC455_20677	153	3.19	Mlig455_065028	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.263	ARPC2	0.962	-	-	-	0.962	-	-	Mlig455_065028 {REF} {Length: 2143} {Pfam: Arp2/3 complex, 34 kD subunit p34-Arc [PF04045.16, score=310.3]} {Human: ENSG00000163466, ARPC2, actin related protein 2/3 complex subunit 2, [RH, Score=382, Expect=2e-133]} {Mouse: ENSMUSG00000006304, Arpc2, actin related protein 2/3 complex, subunit 2, [RH, Score=384, Expect=2e-134]} {Dmel: FBgn0032859, Arpc2, Actin-related protein 2/3 complex, subunit 2, [RH, Score=380, Expect=2e-133]} {Celegans: WBGene00021170, arx-4, Probable actin-related protein 2/3 complex subunit 2, [RH, Score=358, Expect=2e-124]} {Smed: dd_Smed_v6_693_0_1, dd_Smed_v6_693_0_1, [RH, Score=321, Expect=1e-109]} {RNA1509_1503, RNA1509_35964, RNA1509_39058} {RNA1310_13749, RNA1509_1503, RNA1509_35964, RNA1509_39058} {RNA1509_1503, RNA1509_35964, RNA1509_39058, RNA815_6029}
11.	MligTC455_15240	11	0.23	Mlig455_051415	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_051415 {REF} {Length: 607} {NoTransDecoderORF}
12.	MligTC455_45221	50	1.04	Mlig455_057618, Mlig455_070815	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_057618 {REF} {Length: 1114} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=32.4]} {RNA1310_77195} {RNA815_47791} Mlig455_070815 {REF} {Length: 249} {NoTransDecoderORF} {RNA1310_77195} {RNA815_47791}
13.	MligTC455_49782	116	2.41	Mlig455_055413	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.547 Regeneration-upregulated BL: 5.364 Regeneration-enriched BL: 5.364	TAX1BP3	0.959	-	-	-	0.959	-	-	Mlig455_055413 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=31.8]; PDZ domain [PF17820.3, score=25.7]; PDZ domain [PF13180.8, score=22.4]} {Human: ENSG00000213977, TAX1BP3, Tax1 binding protein 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000040158, Tax1bp3, Tax1 (human T cell leukemia virus type I) binding protein 3, [Score=56.6, Expect=6e-11]} {Dmel: FBgn0035148, CG3402, [Score=72.0, Expect=5e-17]} {Celegans: WBGene00016678, C45G9.7, [Score=77.8, Expect=2e-19]} {RNA1509_46994} {RNA1310_49427.1} {RNA815_26268.2}
14.	MligTC455_22419	37	0.78	Mlig455_009205	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_009205 {REF} {Length: 678} {RNA1310_72808} {RNA815_44140}
15.	MligTC455_40248	33	0.68	Mlig455_056510	Neo: - Age: Down-Up-Up		0.958	-	-	-	-	0.958	-	Mlig455_056510 {REF} {Length: 1620} {RNA1310_66570} {RNA815_47280}
16.	MligTC455_46229	215	4.48	Mlig455_022523, Mlig455_022563	Neo: - Age: - Region-enriched R2: 5.024/0.00529		0.958	-	-	-	-	0.958	-	Mlig455_022523 {REF} {Length: 2044} {RNA1310_42787} {RNA815_17352} Mlig455_022563 {REF} {Length: 1991} {RNA1310_42787} {RNA815_17352}
17.	MligTC455_22901	30	0.62	Mlig455_009084	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_009084 {REF} {Length: 1112} {NoTransDecoderORF}
18.	MligTC455_24324	75	1.57	Mlig455_058376	Neo: - Age: - Region-enriched R5: 4.287/0.00044	ANKMY2	0.954	-	-	-	0.954	-	-	Mlig455_058376 {REF} {Length: 2431} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.7]; Ankyrin repeats (many copies) [PF13637.8, score=39.4]; Ankyrin repeat [PF13606.8, score=34.8]; Ankyrin repeat [PF00023.32, score=32.9]; Ankyrin repeats (many copies) [PF13857.8, score=29.1]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [Score=147, Expect=2e-40]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [Score=143, Expect=3e-39]} {Dmel: FBgn0036096, CG8003, [Score=120, Expect=3e-31]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [Score=73.2, Expect=2e-14]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [Score=138, Expect=5e-38]} {RNA1509_45613} {RNA1310_44064} {RNA815_18603}
19.	MligTC455_19759	18	0.39	Mlig455_002694, Mlig455_002710	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458} Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
20.	MligTC455_19995	121	2.53	Mlig455_062804	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_062804 {REF} {Length: 1017} {NoTransDecoderORF} {RNA1509_33903} {RNA1310_35943} {RNA815_44308}
21.	MligTC455_33441	27	0.55	Mlig455_068537	Neo: - Age: Down-Up-Down	GRID1	0.951	-	-	-	-	0.951	-	Mlig455_068537 {REF} {Length: 3049} {Pfam: Ligand-gated ion channel [PF00060.28, score=77.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.3]; Receptor family ligand binding region [PF01094.30, score=43.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=156, Expect=6e-39]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=153, Expect=1e-37]} {Dmel: FBgn0038837, CG3822, [Score=125, Expect=4e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=117, Expect=8e-27]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=259, Expect=3e-78]} {RNA1310_13880.2} {RNA815_12458}
22.	MligTC455_20956	77	1.6	Mlig455_008761	Neo: - Age: Up-Down-Down Region-enriched R8: 3.712/0.03504	GLRA3	0.95	-	-	-	-	0.950	-	Mlig455_008761 {REF} {Length: 3739} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=146.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=124.8]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=344, Expect=7e-114]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=2e-111]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=5e-113]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=336, Expect=7e-111]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=291, Expect=2e-93]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=256, Expect=7e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=253, Expect=1e-78]} {RNA1310_38552.1} {RNA815_6481}