Data search
Results for MligTC455_50867
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50867 | 114 | 2.37 | Mlig455_022658 | Neo: Germline Age: - Region-enriched R5: 2.337/0.01958 |
Mlig455_022658 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_72759} {RNA815_30637.1} |
Cumulative graph for MligTC455_50867
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.261 | 2.179 | 0.24383 | 0.88999 | |
| RegionR2 | 0.952 | 2.179 | 0.33431 | 0.72599 | |
| RegionR3 | 0.621 | 2.179 | 0.42237 | 0.94522 | |
| RegionR4 | 2.228 | 2.179 | 0.02466 | 0.11818 | |
| RegionR5 | 2.337 | 2.179 | 0.00233 | 0.01958 | |
| RegionR6 | 1.366 | 2.179 | 0.13443 | 0.65855 | |
| RegionR7 | -4.866 | 2.179 | 0.99983 | 1.00000 | |
| RegionR8 | -4.9 | 2.179 | 0.99963 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.429 | 2.179 | 0.32272 | 1.00000 | |
| RegenerationR2 | -0.895 | 2.179 | 0.24502 | 0.69265 | |
| RegenerationR3 | -0.085 | 2.179 | 0.90882 | 1.00000 | |
| RegenerationR4 | -0.761 | 2.179 | 0.32866 | 0.76384 | |
| RegenerationR5 | -0.779 | 2.179 | 0.21394 | 0.64895 | |
| RegenerationR6 | -0.7 | 2.179 | 0.39510 | 0.73406 | |
| RegenerationBL | 3.516 | 2.179 | 0.05175 | 0.26221 | |
| RegenerationTP | 4.688 | 2.179 | 0.05478 | 0.38136 |
Genes with expression patterns similar to MligTC455_50867
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50867 | 114 | 2.37 | Mlig455_022658 | Neo: Germline Age: - Region-enriched R5: 2.337/0.01958 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022658 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_72759} {RNA815_30637.1} | |
| 2. | MligTC455_41666 | 950 | 19.78 | Mlig455_040292, Mlig455_040305 | Neo: Int S/G2/M Age: - Region-specific R5: 2.075 Region-enriched R5: 1.515/0.00027 |
MRPS22 | 1.833 | - | - | 0.883 | - | - | 0.950 | Mlig455_040292 {REF} {Length: 2290} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S22 [PF10245.11, score=170.2]} {Human: ENSG00000175110, MRPS22, mitochondrial ribosomal protein S22, [RH, Score=102, Expect=3e-24]} {Mouse: ENSMUSG00000032459, Mrps22, mitochondrial ribosomal protein S22, [RH, Score=104, Expect=7e-25]} {Dmel: FBgn0039555, mRpS22, mitochondrial ribosomal protein S22, [RH, Score=98.6, Expect=1e-22]} {Celegans: WBGene00007564, mrps-22, Mitochondrial Ribosomal Protein, Small, [RH, Score=88.6, Expect=4e-19]} {Smed: dd_Smed_v6_3296_0_1, dd_Smed_v6_3296_0_1, [RH, Score=117, Expect=4e-30]} {RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774} {RNA1310_16405.1, RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774} {RNA1509_19002, RNA1509_21293, RNA1509_28067, RNA1509_44774, RNA815_8452} Mlig455_040305 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S22 [PF10245.11, score=169.9]} {Human: ENSG00000175110, MRPS22, mitochondrial ribosomal protein S22, [RH, Score=100, Expect=2e-23]} {Mouse: ENSMUSG00000032459, Mrps22, mitochondrial ribosomal protein S22, [RH, Score=103, Expect=2e-24]} {Dmel: FBgn0039555, mRpS22, mitochondrial ribosomal protein S22, [Score=92.4, Expect=2e-20]} {Celegans: WBGene00007564, mrps-22, Mitochondrial Ribosomal Protein, Small, [RH, Score=85.1, Expect=4e-18]} {Smed: dd_Smed_v6_3296_0_1, dd_Smed_v6_3296_0_1, [RH, Score=120, Expect=6e-31]} {RNA1509_21293} {RNA1310_16405.1} {RNA815_8452} |
| 3. | MligTC455_53255 | 413 | 8.6 | Mlig455_014908 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.974/0.00170 |
MAD2L1 | 1.81 | 0.859 | - | - | - | - | 0.951 | Mlig455_014908 {REF} {Length: 2989} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.5]; HORMA domain [PF02301.20, score=49.3]; Integrase core domain [PF00665.28, score=38.6]; H2C2 zinc finger [PF09337.12, score=28.2]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [Score=114, Expect=7e-29]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [Score=112, Expect=2e-28]} {Dmel: FBgn0035640, mad2, [Score=90.9, Expect=1e-20]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [Score=101, Expect=2e-25]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=172, Expect=2e-48]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365} |
| 4. | MligTC455_41610 | 149 | 3.1 | Mlig455_005689 | Neo: - Age: Down-Down-Down |
1.806 | - | 0.822 | - | - | - | 0.984 | Mlig455_005689 {REF} {Length: 1271} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_26983, RNA1509_29260} {RNA1310_55944, RNA1509_26983} {RNA1509_26983, RNA815_3780.1} | |
| 5. | MligTC455_49118 | 336 | 7 | Mlig455_069204 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.588/0.00381 |
MCMBP | 1.727 | 0.777 | - | - | - | - | 0.950 | Mlig455_069204 {REF} {Length: 3241} {TRANSSPLICED} {Pfam: Mini-chromosome maintenance replisome factor [PF09739.11, score=310.6]} {Human: ENSG00000197771, MCMBP, minichromosome maintenance complex binding protein, [RH, Score=203, Expect=3e-56]} {Mouse: ENSMUSG00000048170, Mcmbp, minichromosome maintenance complex binding protein, [RH, Score=203, Expect=2e-56]} {Dmel: FBgn0031875, CG3430, [RH, Score=186, Expect=1e-50]} {RNA1509_12390} {RNA1310_5415} {RNA815_3040} |
| 6. | MligTC455_31128 | 677 | 14.09 | Mlig455_014434, Mlig455_014442 | Neo: - Age: Down-Down-Up |
LIG4 | 1.676 | - | - | - | 0.716 | - | 0.960 | Mlig455_014434 {REF} {Length: 3798} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=252, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=133, Expect=8e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_014442 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.7]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]; RNA ligase [PF09414.12, score=27.4]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=2e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=5e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} |
| 7. | MligTC455_11886 | 197 | 4.1 | Mlig455_060688 | Neo: - |
1.657 | - | - | 0.950 | - | - | 0.707 | Mlig455_060688 {REF} {Length: 2150} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=44.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.5]} {Dmel: FBgn0050476, ave, aveugle, [RH, Score=45.4, Expect=1e-06]} {RNA1509_24373, RNA1509_52265} {RNA1310_35457.1, RNA1509_24373, RNA1509_52265} {RNA1509_24373, RNA1509_52265, RNA815_21293} | |
| 8. | MligTC455_51675 | 542 | 11.29 | Mlig455_021608 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_021608 {REF} {Length: 1190} {RNA1509_15055} {RNA1310_5658} {RNA815_21910} | |
| 9. | MligTC455_28481 | 23 | 0.49 | Mlig455_027046 | Neo: - Age: - |
TM9SF3 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_027046 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=444.0]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [Score=686, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [Score=684, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [Score=660, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [Score=655, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [Score=688, Expect=0.0]} {RNA1509_16799} {RNA1310_5383.1, RNA1509_16799} {RNA1509_16799, RNA815_11392} |
| 10. | MligTC455_32181 | 167 | 3.47 | Mlig455_024277 | Neo: Irradiation Age: logFC(26M/2M)=0.310 |
GTF2H2C_2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_024277 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Ssl1-like [PF04056.16, score=211.4]; von Willebrand factor type A domain [PF13519.8, score=35.9]; TFIIH C1-like domain [PF07975.14, score=33.0]} {Human: ENSG00000274675, GTF2H2C_2, GTF2H2 family member C, copy 2, [RH, Score=305, Expect=5e-100]; ENSG00000183474, GTF2H2C, GTF2H2 family member C, [RH, Score=305, Expect=5e-100]; ENSG00000276910, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000275045, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000145736, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]} {Mouse: ENSMUSG00000021639, Gtf2h2, general transcription factor II H, polypeptide 2, [RH, Score=306, Expect=9e-101]} {Dmel: FBgn0037202, Ssl1, Suppressor of stem-loop mutation, [RH, Score=328, Expect=8e-109]} {Celegans: WBGene00011814, T16H12.4, General transcription factor IIH subunit 2, [RH, Score=251, Expect=1e-79]} {Smed: dd_Smed_v6_7018_0_1, dd_Smed_v6_7018_0_1, [RH, Score=278, Expect=5e-90]} {RNA1509_19373} {RNA1310_19775, RNA1509_19373} {RNA1509_19373, RNA815_8031} |
| 11. | MligTC455_21505 | 219 | 4.57 | Mlig455_004243, Mlig455_063139 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.566/0.02847 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_004243 {REF} {Length: 3420} {Pfam: Replication protein A OB domain [PF16900.7, score=34.4]; OB-fold nucleic acid binding domain [PF01336.27, score=20.7]} {RNA1509_42291} {RNA1310_16322} {RNA815_63367} Mlig455_063139 {REF} {Length: 2398} {TRANSSPLICED} {Pfam: Replication protein A OB domain [PF16900.7, score=26.7]} {RNA1509_42291} {RNA1310_16322, RNA1509_42291} {RNA1509_42291, RNA815_63367} |
|
| 12. | MligTC455_51674 | 544 | 11.33 | Mlig455_005146 | Neo: - Age: - |
BMPER | 0.959 | - | - | - | - | 0.959 | - | Mlig455_005146 {REF} {Length: 3361} {Pfam: von Willebrand factor type C domain [PF00093.20, score=64.3]; von Willebrand factor type D domain [PF00094.27, score=56.9]} {Human: ENSG00000164619, BMPER, BMP binding endothelial regulator, [RH, Score=233, Expect=2e-66]} {Mouse: ENSMUSG00000031963, Bmper, BMP-binding endothelial regulator, [RH, Score=239, Expect=5e-69]} {Dmel: FBgn0000395, cv-2, crossveinless 2, [RH, Score=246, Expect=5e-71]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=89.7, Expect=3e-18]} {RNA1509_15055} {RNA1310_5658, RNA1509_15055} {RNA1509_15055, RNA815_2184} |
| 13. | MligTC455_31129 | 1008 | 21 | Mlig455_005615, Mlig455_070184 | Neo: Irradiation Age: logFC(26M/2M)=0.545 Region-specific R5: 1.527 Region-enriched R5: 1.021/0.00725 |
LIG4 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_005615 {REF} {Length: 3975} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=70.9]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.5]; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=57.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.4]; RNA ligase [PF09414.12, score=29.0]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.6]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [Score=546, Expect=2e-178]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [Score=541, Expect=7e-177]} {Dmel: FBgn0030506, Lig4, Ligase4, [Score=214, Expect=4e-57]} {Celegans: WBGene00002986, lig-4, LIGase, [RH, Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [Score=504, Expect=6e-163]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_070184 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_4940} {RNA1310_2815, RNA1509_4940} {RNA1509_4940, RNA815_3459} |
| 14. | MligTC455_49087 | 353 | 7.35 | Mlig455_049999 | Neo: - Age: logFC(26M/2M)=0.321 Region-enriched R3: 2.015/0.00143 |
RAC1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_049999 {REF} {Length: 1762} {Pfam: Ras family [PF00071.24, score=153.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.3]; ADP-ribosylation factor family [PF00025.23, score=21.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=218, Expect=3e-72]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=215, Expect=2e-71]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=2e-70]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=218, Expect=2e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=214, Expect=5e-71]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=1e-70]} {Dmel: FBgn0010333, Rac1, [Score=218, Expect=6e-73]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=223, Expect=6e-75]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=219, Expect=2e-73]} {RNA1509_17203} {RNA1310_15755.1} {RNA815_8276} |