M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_50987

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50987 42 0.89 Mlig455_043099

Neo: -

Age: -

 Mlig455_043099 {REF} {Length: 1440} {NoTransDecoderORF} {RNA1509_22461} {RNA1310_34017} {RNA815_1110}

Cumulative graph for MligTC455_50987

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.914 1.242 1.00000 1.00000
RegionR2 -0.124 1.242 0.59203 0.94479
RegionR3 -1.53 1.242 1.00000 1.00000
RegionR4 2.306 1.242 1.00000 1.00000
RegionR5 1.906 1.242 0.12364 0.35355
RegionR6 -1.557 1.242 1.00000 1.00000
RegionR7 2.523 1.242 0.07671 0.53423
RegionR8 -0.61 1.242 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.867 1.242 1.00000 1.00000
RegenerationR2 1.528 1.242 0.09737 0.49555
RegenerationR3 2.522 1.242 0.11442 0.52812
RegenerationR4 0.832 1.242 0.25945 0.70759
RegenerationR5 0.511 1.242 0.75539 0.97346
RegenerationR6 1.745 1.242 0.32527 0.67114
RegenerationBL 1.536 1.242 0.37161 0.73971
RegenerationTP -0.434 1.242 0.90582 1.00000


Genes with expression patterns similar to MligTC455_50987

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50987 42 0.89 Mlig455_043099

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_043099 {REF} {Length: 1440} {NoTransDecoderORF} {RNA1509_22461} {RNA1310_34017} {RNA815_1110}
2. MligTC455_40991 373 7.77 Mlig455_012838

Neo: -

Age: Up-Down-Up

 RP1 2.736 - - - 0.914 0.953 0.869 Mlig455_012838 {REF} {Length: 9664} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=188.4]; Doublecortin [PF03607.19, score=102.1]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=419, Expect=3e-120]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=414, Expect=7e-119]} {Dmel: FBgn0261387, CG17528, [Score=68.9, Expect=6e-11]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=75.1, Expect=5e-13]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=480, Expect=2e-142]} {RNA1509_42150} {RNA1310_1407} {RNA815_6255}
3. MligTC455_17412 44 0.91 Mlig455_069737

Neo: -

Age: -

Region-enriched R2: 5.062/0.00923

 2.674 - - 0.951 - 0.815 0.908 Mlig455_069737 {REF} {Length: 1628} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=42.8]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=72.8, Expect=3e-14]} {RNA1310_45758} {RNA815_42912}
4. MligTC455_40575 357 7.45 Mlig455_055983, Mlig455_056092

Neo: -

Age: -

 2.492 - - 0.794 0.747 - 0.951

Mlig455_055983 {REF} {Length: 1687} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=23.6]; IRSp53/MIM homology domain [PF08397.13, score=21.5]} {RNA1509_35632} {RNA1310_13000.1} {RNA815_16057}

Mlig455_056092 {REF} {Length: 1986} {Pfam: IRSp53/MIM homology domain [PF08397.13, score=20.9]} {RNA1509_35632} {RNA1310_13000.1, RNA1509_35632} {RNA1509_35632, RNA815_16057}
5. MligTC455_45770 227 4.74 Mlig455_059517

Neo: -

Age: Down-Up-Up

 2.478 - - - 0.791 0.722 0.965 Mlig455_059517 {REF} {Length: 3260} {Pfam: NACHT domain [PF05729.14, score=31.8]; AAA ATPase domain [PF13191.8, score=23.9]} {Smed: dd_Smed_v6_9074_0_1, dd_Smed_v6_9074_0_1, [Score=143, Expect=4e-35]} {RNA1509_44893} {RNA1310_38241, RNA1509_44893} {RNA1509_44893, RNA815_33748}
6. MligTC455_07101 46 0.96 Mlig455_062761

Neo: -

Age: Down-Up-Down

 POU4F1 1.818 - - 0.962 - - 0.856 Mlig455_062761 {REF} {Length: 2816} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=7e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=266, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=265, Expect=3e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=4e-75]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=5e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659}
7. MligTC455_14306 49 1.02 Mlig455_040652, Mlig455_062065

Neo: -

Age: -

 1.794 - - 0.973 0.821 - -

Mlig455_040652 {REF} {Length: 1154} {NoTransDecoderORF} {RNA1509_52052} {RNA1310_51938} {RNA815_453.1}

Mlig455_062065 {REF} {Length: 1349} {NoTransDecoderORF} {RNA1509_52052} {RNA1310_51938} {RNA815_453.1}
8. MligTC455_43337 103 2.14 Mlig455_057374

Neo: -

Age: -

 CYB5D1 1.76 - - - - 0.804 0.956 Mlig455_057374 {REF} {Length: 1290} {Pfam: Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=35.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=25.5]} {Human: ENSG00000182224, CYB5D1, cytochrome b5 domain containing 1, [RH, Score=260, Expect=6e-88]} {Mouse: ENSMUSG00000044795, Cyb5d1, cytochrome b5 domain containing 1, [RH, Score=263, Expect=2e-89]; ENSMUSG00000032889, Gm6685, predicted pseudogene 6685, [RH, Score=260, Expect=3e-88]} {RNA1509_14882} {RNA1310_26198} {RNA815_11579}
9. MligTC455_33703 69 1.44 Mlig455_002442

Neo: -

Age: -

 1.71 - - 0.760 - - 0.950 Mlig455_002442 {REF} {Length: 1320} {NoTransDecoderORF} {RNA1310_44761} {RNA815_22052}
10. MligTC455_25819 68 1.41 Mlig455_006265, Mlig455_006266

Neo: -

Age: -

 IRX1 1.672 - - 0.950 - - 0.722

Mlig455_006265 {REF} {Length: 2122} {Pfam: Homeobox KN domain [PF05920.13, score=54.3]; Homeodomain [PF00046.31, score=31.9]} {Human: ENSG00000170549, IRX1, iroquois homeobox 1, [RH, Score=137, Expect=2e-35]} {Mouse: ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [RH, Score=139, Expect=3e-36]} {Dmel: FBgn0015919, caup, caupolican, [Score=148, Expect=1e-38]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=117, Expect=5e-29]} {Smed: dd_Smed_v6_11500_0_1, dd_Smed_v6_11500_0_1, [Score=159, Expect=1e-44]} {RNA1310_84478}

Mlig455_006266 {REF} {Length: 1355} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=41.6, Expect=1e-05]} {RNA1509_58615} {RNA1310_9333.2} {RNA815_2042.1}
11. MligTC455_29770 150 3.12 Mlig455_013548, Mlig455_041433

Neo: -

Age: -

 MAP3K19 0.977 - - - - - 0.977

Mlig455_013548 {REF} {Length: 571} {NoTransDecoderORF} {RNA1509_6748} {RNA1310_95865} {RNA815_24422.1}

Mlig455_041433 {REF} {Length: 1974} {Pfam: Protein kinase domain [PF00069.27, score=69.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=84.0, Expect=3e-19]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=80.5, Expect=3e-18]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=70.1, Expect=8e-15]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=61.2, Expect=5e-12]} {Smed: dd_Smed_v6_2030_0_29, dd_Smed_v6_2030_0_29, [Score=75.1, Expect=3e-18]} {RNA1509_48626} {RNA1310_17852.1} {RNA815_25899}
12. MligTC455_51327 321 6.69 Mlig455_060958

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_060958 {REF} {Length: 2116} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [Score=177, Expect=1e-55]} {RNA1509_26146} {RNA1310_14081.2, RNA1509_26146} {RNA1509_26146, RNA815_12360}
13. MligTC455_52617 14 0.3 Mlig455_046588

Neo: -

Age: -

 0.976 - - - - - 0.976 Mlig455_046588 {REF} {Length: 1950} {NoTransDecoderORF} {RNA1509_28857} {RNA1310_114973}
14. MligTC455_25948 26 0.53 Mlig455_020747

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_020747 {REF} {Length: 891} {TRANSSPLICED} {RNA1509_54816} {RNA1310_68154} {RNA815_23085.1}
15. MligTC455_47949 48 1 Mlig455_026482, Mlig455_026492

Neo: -

Age: -

 CHRNA3 0.97 - - 0.970 - - -

Mlig455_026482 {REF} {Length: 2240} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=248.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=225.1]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=398, Expect=8e-133]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=382, Expect=5e-127]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=382, Expect=2e-126]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=398, Expect=4e-133]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=397, Expect=5e-133]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=384, Expect=1e-127]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=473, Expect=1e-161]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=445, Expect=7e-152]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=416, Expect=2e-140]} {RNA1310_45284} {RNA815_36657}

Mlig455_026492 {REF} {Length: 1090} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=248.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=225.1]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=398, Expect=8e-133]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=382, Expect=5e-127]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=382, Expect=2e-126]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=398, Expect=4e-133]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=397, Expect=5e-133]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=384, Expect=1e-127]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=473, Expect=1e-161]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=445, Expect=7e-152]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=416, Expect=2e-140]} {RNA1310_45284} {RNA815_36657}
16. MligTC455_23413 38 0.79 Mlig455_020722

Neo: -

Age: Up-Down-Down

 0.966 - - - - - 0.966 Mlig455_020722 {REF} {Length: 3316} {TRANSSPLICED} {RNA1509_28642} {RNA1310_14764} {RNA815_31000}
17. MligTC455_34067 27 0.56 Mlig455_068632

Neo: -

Age: logFC(26M/2M)=-0.750

 DNAJB5 0.963 - - - - - 0.963 Mlig455_068632 {REF} {Length: 2763} {Pfam: DnaJ domain [PF00226.33, score=59.0]} {Human: ENSG00000137094, DNAJB5, DnaJ heat shock protein family (Hsp40) member B5, [Score=61.6, Expect=1e-11]; ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=61.6, Expect=3e-10]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=64.3, Expect=2e-11]; ENSMUSG00000036052, Dnajb5, DnaJ heat shock protein family (Hsp40) member B5, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0002174, l(2)tid, lethal (2) tumorous imaginal discs, [Score=60.5, Expect=4e-10]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=60.5, Expect=2e-10]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=58.2, Expect=5e-10]} {RNA1509_49462} {RNA1310_6585.1} {RNA815_37589}
18. MligTC455_39813 75 1.57 Mlig455_045961

Neo: -

Age: -

 SLC17A8 0.963 - - 0.963 - - - Mlig455_045961 {REF} {Length: 3015} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_53919} {RNA1310_33327} {RNA815_42042}
19. MligTC455_14712 29 0.61 Mlig455_005163, Mlig455_021626

Neo: -

Age: -

 PTGER4 0.961 - - 0.961 - - -

Mlig455_005163 {REF} {Length: 2466} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.4]} {Human: ENSG00000171522, PTGER4, prostaglandin E receptor 4, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000039942, Ptger4, prostaglandin E receptor 4 (subtype EP4), [Score=55.8, Expect=8e-08]} {RNA1310_74292} {RNA815_48878}

Mlig455_021626 {REF} {Length: 2225} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.4]} {Human: ENSG00000171522, PTGER4, prostaglandin E receptor 4, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000039942, Ptger4, prostaglandin E receptor 4 (subtype EP4), [Score=54.7, Expect=2e-07]} {Dmel: FBgn0038063, Octbeta2R, Octopamine beta2 receptor, [Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_22356_0_1, dd_Smed_v6_22356_0_1, [RH, Score=49.7, Expect=2e-06]} {RNA1310_83392} {RNA815_48878}
20. MligTC455_30127 265 5.52 Mlig455_012331

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_012331 {REF} {Length: 1588} {RNA1509_49925} {RNA1310_780.1} {RNA815_353.1}
21. MligTC455_42779 52 1.08 Mlig455_034985

Neo: -

Age: -

 TIA1 0.961 - - 0.961 - - - Mlig455_034985 {REF} {Length: 2883} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.6]; RNA binding motif [PF08777.13, score=27.7]; RNA recognition motif [PF16367.7, score=27.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=22.0]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=19.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=19.0]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [RH, Score=236, Expect=6e-74]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [RH, Score=225, Expect=2e-69]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [RH, Score=234, Expect=2e-73]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [RH, Score=225, Expect=2e-70]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=242, Expect=4e-75]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [RH, Score=229, Expect=2e-71]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [RH, Score=359, Expect=2e-122]} {RNA1509_20262} {RNA1310_6771} {RNA815_11494}
22. MligTC455_52699 22 0.45 Mlig455_031872

Neo: -

Age: Up-Down-Up

 0.961 - - - - - 0.961 Mlig455_031872 {REF} {Length: 2955} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=132.6]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_42891} {RNA1310_29536} {RNA815_50793}
23. MligTC455_13282 95 1.99 Mlig455_021294

Neo: -

Age: Down-Up-Down

 0.958 - - 0.958 - - - Mlig455_021294 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_63724} {RNA815_38056}
24. MligTC455_17357 30 0.62 Mlig455_025364

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_025364 {REF} {Length: 570} {NoTransDecoderORF}
25. MligTC455_33460 155 3.24 Mlig455_043671, Mlig455_043782, Mlig455_052607

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.867/0.03359

 0.958 - - - 0.958 - -

Mlig455_043671 {REF} {Length: 2416} {Pfam: SAP domain [PF02037.29, score=40.8]} {RNA1509_8096} {RNA1310_1771} {RNA815_801}

Mlig455_043782 {REF} {Length: 514} {Pfam: SAP domain [PF02037.29, score=37.7]} {RNA1509_8096} {RNA1310_1771} {RNA815_801}

Mlig455_052607 {REF} {Length: 497} {Pfam: SAP domain [PF02037.29, score=40.8]; SAP domain-containing new25 [PF18953.2, score=19.6]} {RNA1509_8096} {RNA1310_1771} {RNA815_801}
26. MligTC455_30128 1384 28.83 Mlig455_012305, Mlig455_045055, Mlig455_045068, Mlig455_051376, Mlig455_062016, Mlig455_067370

Neo: -

Age: -

 0.957 - - - 0.957 - -

Mlig455_012305 {REF} {Length: 1111} {RNA1509_49925} {RNA1310_780.1} {RNA815_353.1}

Mlig455_045055 {REF} {Length: 4707} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}

Mlig455_045068 {REF} {Length: 4708} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}

Mlig455_051376 {REF} {Length: 4629} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}

Mlig455_062016 {REF} {Length: 4710} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}

Mlig455_067370 {REF} {Length: 4713} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}
27. MligTC455_39752 68 1.41 Mlig455_003074

Neo: -

Age: -

Region-enriched R2: 3.667/0.04790

 SBK1 0.957 - - 0.957 - - - Mlig455_003074 {REF} {Length: 1737} {Pfam: Protein kinase domain [PF00069.27, score=155.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=101.0]; Kinase-like [PF14531.8, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.3]} {Human: ENSG00000188322, SBK1, SH3 domain binding kinase 1, [RH, Score=262, Expect=9e-84]} {Mouse: ENSMUSG00000042978, Sbk1, SH3-binding kinase 1, [RH, Score=263, Expect=2e-84]} {Dmel: FBgn0031855, CG11221, [RH, Score=224, Expect=4e-69]} {Celegans: WBGene00015293, C01C4.3, Putative serine/threonine-protein kinase C01C4.3, [RH, Score=184, Expect=5e-55]} {Smed: dd_Smed_v6_12166_0_1, dd_Smed_v6_12166_0_1, [Score=109, Expect=5e-26]} {RNA1310_28583} {RNA815_17334}
28. MligTC455_10445 51 1.06 Mlig455_023947

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_023947 {REF} {Length: 580} {NoTransDecoderORF} {RNA1509_32472} {RNA1310_25828} {RNA815_4805}
29. MligTC455_50772 61 1.28 Mlig455_050043

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_050043 {REF} {Length: 2906} {Pfam: Innexin [PF00876.20, score=406.8]} {Dmel: FBgn0085387, shakB, shaking B, [Score=123, Expect=4e-31]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=333, Expect=6e-111]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [RH, Score=507, Expect=4e-178]} {RNA1509_51082} {RNA1310_20499} {RNA815_8755}
30. MligTC455_15720 37 0.78 Mlig455_000177

Neo: -

Age: Up-Down-Down

 TRPC3 0.953 - - 0.953 - - - Mlig455_000177 {REF} {Length: 4780} {Pfam: Transient receptor ion channel II [PF08344.13, score=91.7]; Ion transport protein [PF00520.33, score=56.1]; Ankyrin repeats (3 copies) [PF12796.9, score=34.0]; Ankyrin repeat [PF13606.8, score=29.0]; Ankyrin repeat [PF00023.32, score=24.2]} {Human: ENSG00000138741, TRPC3, transient receptor potential cation channel subfamily C member 3, [Score=517, Expect=2e-166]; ENSG00000137672, TRPC6, transient receptor potential cation channel subfamily C member 6, [Score=506, Expect=2e-162]; ENSG00000069018, TRPC7, transient receptor potential cation channel subfamily C member 7, [Score=506, Expect=4e-163]} {Mouse: ENSMUSG00000027716, Trpc3, transient receptor potential cation channel, subfamily C, member 3, [Score=511, Expect=2e-164]; ENSMUSG00000021541, Trpc7, transient receptor potential cation channel, subfamily C, member 7, [Score=507, Expect=2e-163]; ENSMUSG00000031997, Trpc6, transient receptor potential cation channel, subfamily C, member 6, [Score=501, Expect=1e-160]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=451, Expect=1e-139]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=448, Expect=9e-140]} {Smed: dd_Smed_v6_13048_0_2, dd_Smed_v6_13048_0_2, [RH, Score=1276, Expect=0.0]} {RNA1509_39636} {RNA1310_5314} {RNA815_4923}
31. MligTC455_28546 318 6.62 Mlig455_023253

Neo: -

Age: logFC(26M/2M)=-0.465

 0.952 - - - - - 0.952 Mlig455_023253 {REF} {Length: 9638} {Pfam: Ubiquitin family [PF00240.25, score=94.2]; WXG100 protein secretion system (Wss), protein YukD [PF08817.12, score=27.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=23.5]} {RNA1509_4245} {RNA1310_386} {RNA815_143.1}
32. MligTC455_30129 747 15.56 Mlig455_040668, Mlig455_068785, Mlig455_068803

Neo: -

Age: -

 0.952 - - - 0.952 - -

Mlig455_040668 {REF} {Length: 2635} {TRANSSPLICED} {RNA1509_6439} {RNA1310_1354} {RNA815_353.1}

Mlig455_068785 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_49925} {RNA1310_780.1} {RNA815_353.1}

Mlig455_068803 {REF} {Length: 2634} {TRANSSPLICED} {RNA1509_6439} {RNA1310_1354} {RNA815_353.1}
33. MligTC455_52443 19 0.4 Mlig455_058564

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_058564 {REF} {Length: 2584} {RNA1310_86967}
34. MligTC455_45064 98 2.04 Mlig455_059206

Neo: -

Age: -

Region-enriched R2: 3.378/0.01843

 MTUS2 0.951 - - 0.951 - - - Mlig455_059206 {REF} {Length: 4973} {Human: ENSG00000132938, MTUS2, microtubule associated scaffold protein 2, [RH, Score=70.5, Expect=1e-11]} {Mouse: ENSMUSG00000029651, Mtus2, microtubule associated tumor suppressor candidate 2, [RH, Score=72.0, Expect=3e-12]} {Dmel: FBgn0015600, toc, toucan, [RH, Score=58.5, Expect=3e-08]} {RNA1509_44985, RNA1509_58911} {RNA1310_13922.1, RNA1509_44985} {RNA1509_44985, RNA815_11784}
35. MligTC455_16012 42 0.87 Mlig455_051941

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_051941 {REF} {Length: 640} {RNA1310_68751} {RNA815_35508}
36. MligTC455_32010 842 17.54 Mlig455_004590, Mlig455_064756

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.369

 0.95 - - - - - 0.950

Mlig455_004590 {REF} {Length: 1488} {Smed: dd_Smed_v6_9116_0_1, dd_Smed_v6_9116_0_1, [RH, Score=55.8, Expect=1e-08]} {RNA1509_41382} {RNA1310_24662, RNA1509_41382} {RNA1509_41382, RNA815_11221}

Mlig455_064756 {REF} {Length: 1506} {Smed: dd_Smed_v6_9116_0_1, dd_Smed_v6_9116_0_1, [RH, Score=53.9, Expect=8e-08]} {RNA1509_23934} {RNA1310_24662, RNA1509_23934} {RNA1509_23934, RNA815_11221}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA