M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_51277

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51277 158 3.29 Mlig455_049694

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.977/0.02487

 DCPS Mlig455_049694 {REF} {Length: 2306} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=82.1]; Scavenger mRNA decapping enzyme (DcpS) N-terminal [PF05652.14, score=47.3]} {Human: ENSG00000110063, DCPS, decapping enzyme, scavenger, [RH, Score=228, Expect=1e-71]} {Mouse: ENSMUSG00000032040, Dcps, decapping enzyme, scavenger, [RH, Score=223, Expect=7e-70]} {Dmel: FBgn0037372, CG2091, [RH, Score=213, Expect=5e-66]} {Celegans: WBGene00000940, dcs-1, m7GpppX diphosphatase, [RH, Score=203, Expect=6e-63]} {Smed: dd_Smed_v6_1924_0_1, dd_Smed_v6_1924_0_1, [RH, Score=190, Expect=4e-58]} {RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1310_19913, RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1509_32508, RNA1509_51975, RNA1509_55727, RNA815_5168}

Cumulative graph for MligTC455_51277

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.643 2.597 0.10011 0.66786
RegionR2 1.778 2.597 0.10678 0.40276
RegionR3 0.711 2.597 0.46522 0.97326
RegionR4 -0.099 2.597 0.88753 1.00000
RegionR5 1.977 2.597 0.00321 0.02487
RegionR6 1.43 2.597 0.10520 0.59450
RegionR7 0.834 2.597 0.49045 1.00000
RegionR8 0.012 2.597 0.86787 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.131 2.597 1.00000 1.00000
RegenerationR2 1.162 2.597 0.07942 0.45456
RegenerationR3 1.306 2.597 0.07177 0.44811
RegenerationR4 1.005 2.597 0.18581 0.62720
RegenerationR5 0.163 2.597 0.73553 0.96622
RegenerationR6 1.402 2.597 0.04088 0.25308
RegenerationBL -0.09 2.597 0.93681 1.00000
RegenerationTP 0.666 2.597 0.62388 0.97413


Genes with expression patterns similar to MligTC455_51277

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51277 158 3.29 Mlig455_049694

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.977/0.02487

 DCPS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049694 {REF} {Length: 2306} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=82.1]; Scavenger mRNA decapping enzyme (DcpS) N-terminal [PF05652.14, score=47.3]} {Human: ENSG00000110063, DCPS, decapping enzyme, scavenger, [RH, Score=228, Expect=1e-71]} {Mouse: ENSMUSG00000032040, Dcps, decapping enzyme, scavenger, [RH, Score=223, Expect=7e-70]} {Dmel: FBgn0037372, CG2091, [RH, Score=213, Expect=5e-66]} {Celegans: WBGene00000940, dcs-1, m7GpppX diphosphatase, [RH, Score=203, Expect=6e-63]} {Smed: dd_Smed_v6_1924_0_1, dd_Smed_v6_1924_0_1, [RH, Score=190, Expect=4e-58]} {RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1310_19913, RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1509_32508, RNA1509_51975, RNA1509_55727, RNA815_5168}
2. MligTC455_16933 502 10.45 Mlig455_022729

Neo: Irradiation

Age: -

Region-enriched R5: 1.943/0.00000

 KIF23 2.667 0.855 0.847 0.965 - - - Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976}
3. MligTC455_50242 658 13.71 Mlig455_010544, Mlig455_061792, Mlig455_061832

Neo: -

Age: -

Region-enriched R5: 2.437/0.00039

 2.635 0.880 0.777 0.978 - - -

Mlig455_010544 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388, RNA1509_46524} {RNA1310_11073, RNA1509_46524} {RNA1509_46524, RNA815_6049}

Mlig455_061792 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073} {RNA815_6049}

Mlig455_061832 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073, RNA1509_22388} {RNA1509_22388, RNA815_6049}
4. MligTC455_09815 233 4.84 Mlig455_069904

Neo: -

Age: -

Region-enriched R5: 1.280/0.02090

 2.565 - - 0.955 - 0.809 0.801 Mlig455_069904 {REF} {Length: 2860} {TRANSSPLICED} {RNA1509_48847} {RNA1310_16604, RNA1509_48847} {RNA1509_48847, RNA815_16640}
5. MligTC455_26002 237 4.93 Mlig455_003520

Neo: -

Age: -

 RAB8B 2.499 0.809 0.738 0.952 - - - Mlig455_003520 {REF} {Length: 1926} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=21.6]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=54.7, Expect=2e-10]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=54.3, Expect=3e-10]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=56.2, Expect=4e-11]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=55.8, Expect=6e-11]} {Dmel: FBgn0262518, Rab8, [Score=48.1, Expect=3e-08]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=50.8, Expect=3e-09]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=50.1, Expect=4e-09]} {RNA1509_12702} {RNA1310_26159.1} {RNA815_11534.2}
6. MligTC455_48694 1650 34.37 Mlig455_010497, Mlig455_061881

Neo: -

Age: -

Region-enriched R5: 1.515/0.00036

 PLEKHF2 2.464 - 0.763 0.959 - - 0.742

Mlig455_010497 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=74.4]; PH domain [PF00169.31, score=20.5]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [Score=183, Expect=3e-57]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [Score=182, Expect=3e-57]} {Dmel: FBgn0025381, rush, rush hour, [Score=175, Expect=1e-53]} {Celegans: WBGene00014019, ZK632.12, [Score=174, Expect=6e-54]} {Smed: dd_Smed_v6_2374_0_1, dd_Smed_v6_2374_0_1, [RH, Score=162, Expect=3e-50]} {RNA1509_3755} {RNA1310_20832.2, RNA1509_3755} {RNA1509_3755, RNA815_8504}

Mlig455_061881 {REF} {Length: 1485} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=74.4]; PH domain [PF00169.31, score=20.5]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [Score=183, Expect=3e-57]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [Score=182, Expect=3e-57]} {Dmel: FBgn0025381, rush, rush hour, [Score=175, Expect=1e-53]} {Celegans: WBGene00014019, ZK632.12, [Score=174, Expect=6e-54]} {Smed: dd_Smed_v6_2374_0_1, dd_Smed_v6_2374_0_1, [RH, Score=162, Expect=3e-50]} {RNA1509_3755} {RNA1310_20832.2} {RNA815_8504}
7. MligTC455_22778 359 7.49 Mlig455_047337

Neo: -

Age: -

Region-specific R5: 2.079

Region-enriched R5: 1.537/0.00003

 2.444 0.730 0.755 0.959 - - - Mlig455_047337 {REF} {Length: 1115} {RNA1509_47955, RNA1509_49869} {RNA1310_2182, RNA1509_47955} {RNA1509_47955, RNA815_46359}
8. MligTC455_23654 191 3.98 Mlig455_018002

Neo: -

Age: -

Region-enriched R5: 1.946/0.00166

 SPDYC 2.404 0.720 0.733 0.951 - - - Mlig455_018002 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112} {RNA1310_23429, RNA1509_12112} {RNA1509_12112, RNA815_28518}
9. MligTC455_25694 254 5.29 Mlig455_055763

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.769/0.01268

 PBK 2.386 0.717 0.718 0.951 - - - Mlig455_055763 {REF} {Length: 1808} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=112.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.7]; Kinase-like [PF14531.8, score=26.1]} {Human: ENSG00000168078, PBK, PDZ binding kinase, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000022033, Pbk, PDZ binding kinase, [RH, Score=150, Expect=3e-42]} {Dmel: FBgn0030864, CG8173, [RH, Score=157, Expect=2e-44]} {Celegans: WBGene00017033, nekl-4, Serine/threonine-protein kinase D1044.8, [Score=95.9, Expect=2e-21]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=86.7, Expect=1e-18]} {RNA1509_24167, RNA1509_43945} {RNA1310_28898, RNA1509_43945} {RNA1509_43945, RNA815_22190}
10. MligTC455_19587 336 7 Mlig455_042592

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.602/0.00282

 POLE4 1.878 - - 0.959 - 0.919 - Mlig455_042592 {REF} {Length: 1459} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=58.5]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=44.5]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=28.2]; TATA box binding protein associated factor (TAF) [PF02969.19, score=19.1]} {Human: ENSG00000115350, POLE4, DNA polymerase epsilon 4, accessory subunit, [RH, Score=72.8, Expect=1e-16]} {Mouse: ENSMUSG00000030042, Pole4, polymerase (DNA-directed), epsilon 4 (p12 subunit), [RH, Score=74.3, Expect=1e-17]} {Dmel: FBgn0034726, Mes4, Mesoderm-expressed 4, [RH, Score=79.0, Expect=5e-19]} {Celegans: WBGene00013150, Y53F4B.3, [RH, Score=64.3, Expect=2e-13]} {RNA1509_11473} {RNA1310_28970} {RNA815_13355.1}
11. MligTC455_17763 261 5.43 Mlig455_044693

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.402/0.00010

 1.847 0.878 - 0.969 - - - Mlig455_044693 {REF} {Length: 7124} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=36.3]; Crescentin protein [PF19220.2, score=30.9]} {Mouse: ENSMUSG00000032232, Cgnl1, cingulin-like 1, [Score=52.8, Expect=5e-06]} {RNA1509_3212, RNA1509_53163, RNA1509_56979} {RNA1310_722.1, RNA1509_53163, RNA1509_56979} {RNA1509_53163, RNA1509_56979, RNA815_432.1}
12. MligTC455_51939 398 8.29 Mlig455_021929

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.711/0.02614

 TOX4 1.781 - - 0.950 - 0.831 - Mlig455_021929 {REF} {Length: 2227} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.8]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=19.9]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]; ENSG00000198846, TOX, thymocyte selection associated high mobility group box, [Score=50.8, Expect=4e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [RH, Score=70.1, Expect=3e-13]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216, RNA1509_21366, RNA1509_50240} {RNA1310_11409.1, RNA1509_21366, RNA1509_50240} {RNA1509_21366, RNA1509_50240, RNA815_3695.1}
13. MligTC455_10670 90 1.87 Mlig455_047008

Neo: -

Age: -

 POGZ 1.775 - 0.823 0.952 - - - Mlig455_047008 {REF} {Length: 4920} {Pfam: CIDE-N domain [PF02017.17, score=45.8]} {Human: ENSG00000143442, POGZ, pogo transposable element derived with ZNF domain, [RH, Score=135, Expect=2e-31]} {Mouse: ENSMUSG00000038902, Pogz, pogo transposable element with ZNF domain, [RH, Score=133, Expect=5e-31]} {Dmel: FBgn0033998, row, relative of woc, [RH, Score=106, Expect=8e-23]} {Smed: dd_Smed_v6_2118_0_1, dd_Smed_v6_2118_0_1, [Score=124, Expect=7e-29]} {RNA1509_22224, RNA1509_46837} {RNA1310_16138, RNA1509_46837} {RNA1509_46837, RNA815_23431}
14. MligTC455_32654 93 1.93 Mlig455_038742

Neo: -

Age: Down-Up-Up

Region-enriched R5: 3.441/0.00267

 1.747 - 0.785 0.962 - - - Mlig455_038742 {REF} {Length: 2381} {TRANSSPLICED} {RNA1509_55323} {RNA1310_9315.1} {RNA815_3200.1}
15. MligTC455_25958 324 6.76 Mlig455_044638

Neo: Irradiation

Age: logFC(26M/2M)=0.309

Region-enriched R5: 3.253/0.00000
Region-enriched R6: 1.852/0.04168

 DLL1 1.694 - 0.743 0.951 - - - Mlig455_044638 {REF} {Length: 5040} {Pfam: EGF-like domain [PF00008.29, score=84.4]; Delta serrate ligand [PF01414.21, score=66.3]; EGF-like domain [PF07974.15, score=59.7]; Human growth factor-like EGF [PF12661.9, score=50.7]; N terminus of Notch ligand [PF07657.15, score=35.2]; Laminin EGF domain [PF00053.26, score=20.9]} {Human: ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [RH, Score=277, Expect=9e-82]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [RH, Score=277, Expect=9e-82]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=271, Expect=6e-80]} {Dmel: FBgn0000463, Dl, dorsal, [RH, Score=264, Expect=2e-76]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=2e-33]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [RH, Score=309, Expect=7e-92]} {RNA1509_17528} {RNA1310_7288, RNA1509_17528} {RNA1509_17528, RNA815_3267}
16. MligTC455_35935 1080 22.49 Mlig455_052154, Mlig455_054164, Mlig455_060703, Mlig455_061061

Neo: Irradiation

Age: logFC(26M/2M)=0.223

Region-specific R5: 4.398

Region-enriched R5: 3.799/0.00000
Region-enriched R6: 2.385/0.00008

 1.693 0.727 - 0.966 - - -

Mlig455_052154 {REF} {Length: 2638} {Pfam: P21-Rho-binding domain [PF00786.30, score=48.6]} {RNA1509_18159, RNA1509_58379, RNA1509_7763} {RNA1310_9605, RNA1509_18159, RNA1509_58379, RNA1509_7763} {RNA1509_18159, RNA1509_58379, RNA1509_7763, RNA815_13083}

Mlig455_054164 {REF} {Length: 2298} {Pfam: P21-Rho-binding domain [PF00786.30, score=53.8]} {RNA1509_7763} {RNA1310_9605} {RNA815_13083}

Mlig455_060703 {REF} {Length: 444} {NoTransDecoderORF} {RNA1509_18159} {RNA1310_9605} {RNA815_15790.2}

Mlig455_061061 {REF} {Length: 1087} {Pfam: Cysteine rich repeat [PF02363.21, score=18.7]}
17. MligTC455_15471 310 6.45 Mlig455_022527

Neo: Irradiation

Age: logFC(26M/2M)=0.502

Region-enriched R5: 3.024/0.00001

 CHEK1 1.687 - 0.729 0.958 - - - Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053}
18. MligTC455_05445 216 4.5 Mlig455_057834, Mlig455_057845

Neo: Irradiation

Age: -

Region-enriched R5: 4.010/0.00000

 1.686 - 0.731 0.955 - - -

Mlig455_057834 {REF} {Length: 2777} {Pfam: Mab-21 protein [PF03281.16, score=28.6]} {RNA1509_21275} {RNA1310_27488} {RNA815_25797}

Mlig455_057845 {REF} {Length: 2779} {Pfam: Mab-21 protein [PF03281.16, score=28.7]} {RNA1509_21275} {RNA1310_27488} {RNA815_25797}
19. MligTC455_32495 596 12.42 Mlig455_022664

Neo: -

Age: -

 1.685 0.716 - 0.969 - - - Mlig455_022664 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: Beta-lactamase [PF00144.26, score=168.0]} {Celegans: WBGene00010877, lact-4, Beta-LACTamase domain containing, [RH, Score=211, Expect=2e-63]} {Smed: dd_Smed_v6_8380_0_1, dd_Smed_v6_8380_0_1, [RH, Score=165, Expect=2e-46]} {RNA1509_13481, RNA1509_16305} {RNA1310_17936.2, RNA1509_13481, RNA1509_16305} {RNA1509_13481, RNA1509_16305, RNA815_7035}
20. MligTC455_25623 363 7.56 Mlig455_040317

Neo: -

Age: -

 EXOC2 1.672 - 0.722 0.950 - - - Mlig455_040317 {REF} {Length: 3634} {TRANSSPLICED} {Pfam: Exocyst complex component Sec5 [PF15469.8, score=183.5]; IPT/TIG domain [PF01833.26, score=36.0]} {Human: ENSG00000112685, EXOC2, exocyst complex component 2, [RH, Score=139, Expect=4e-33]} {Mouse: ENSMUSG00000021357, Exoc2, exocyst complex component 2, [RH, Score=133, Expect=3e-31]} {Dmel: FBgn0266670, Sec5, Secretory 5, [RH, Score=154, Expect=6e-38]} {Celegans: WBGene00004752, sec-5, Exocyst complex component 2, [RH, Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_3648_0_1, dd_Smed_v6_3648_0_1, [RH, Score=161, Expect=1e-40]} {RNA1509_37652, RNA1509_7460} {RNA1310_2755.2, RNA1509_37652, RNA1509_7460} {RNA1509_37652, RNA1509_7460, RNA815_3813.1}
21. MligTC455_35359 375 7.81 Mlig455_062928

Neo: -

Age: Up-Down-Down

 SCAP 1.667 - - 0.951 - 0.716 - Mlig455_062928 {REF} {Length: 5472} {TRANSSPLICED} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=147.1]; Patched family [PF02460.20, score=59.8]; WD domain, G-beta repeat [PF00400.34, score=28.0]} {Human: ENSG00000114650, SCAP, SREBF chaperone, [RH, Score=364, Expect=8e-106]} {Mouse: ENSMUSG00000032485, Scap, SREBF chaperone, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033052, SCAP, SREBP cleavage activating protein, [RH, Score=289, Expect=2e-80]} {Celegans: WBGene00004744, scp-1, SREBP Cleavage activating Protein (SCAP) homolog, [RH, Score=236, Expect=1e-63]} {Smed: dd_Smed_v6_12222_0_1, dd_Smed_v6_12222_0_1, [RH, Score=366, Expect=2e-108]} {RNA1509_25017, RNA1509_28936} {RNA1310_1382.1, RNA1509_25017, RNA1509_28936} {RNA1509_25017, RNA1509_28936, RNA815_1411.1}
22. MligTC455_47245 73 1.52 Mlig455_027393

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_027393 {REF} {Length: 1984} {Dmel: FBgn0034267, CG4984, [Score=52.4, Expect=1e-07]} {RNA1310_36758} {RNA815_27905}
23. MligTC455_49891 386 8.03 Mlig455_016073

Neo: -

Age: -

Region-enriched R5: 1.569/0.00576

 SLC44A1 0.974 - - 0.974 - - - Mlig455_016073 {REF} {Length: 4090} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.3]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=262, Expect=1e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=5e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=258, Expect=4e-75]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=4e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=3e-84]} {RNA1509_16805, RNA1509_42975, RNA1509_57946} {RNA1310_5849, RNA1509_42975, RNA1509_57946} {RNA1509_42975, RNA1509_57946, RNA815_2956.1}
24. MligTC455_03528 478 9.96 Mlig455_005088, Mlig455_005223

Neo: -

Age: -

 ZDHHC23 0.963 - - 0.963 - - -

Mlig455_005088 {REF} {Length: 2619} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=48.4]} {Human: ENSG00000184307, ZDHHC23, zinc finger DHHC-type containing 23, [Score=49.3, Expect=3e-06]} {Mouse: ENSMUSG00000036304, Zdhhc23, zinc finger, DHHC domain containing 23, [Score=53.9, Expect=1e-07]} {Dmel: FBgn0031495, GABPI, beta4GalNAcTB pilot, [Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_6073_0_1, dd_Smed_v6_6073_0_1, [RH, Score=85.1, Expect=1e-18]} {RNA1509_23328} {RNA1310_27848} {RNA815_10423.1}

Mlig455_005223 {REF} {Length: 3373} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=48.5]} {Human: ENSG00000184307, ZDHHC23, zinc finger DHHC-type containing 23, [Score=48.5, Expect=4e-06]} {Mouse: ENSMUSG00000036304, Zdhhc23, zinc finger, DHHC domain containing 23, [Score=53.9, Expect=1e-07]} {Dmel: FBgn0031495, GABPI, beta4GalNAcTB pilot, [Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_6073_0_1, dd_Smed_v6_6073_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_23328} {RNA1310_20678.1} {RNA815_10423.1}
25. MligTC455_08175 30 0.62 Mlig455_002592

Neo: -

Age: -

 RABEP1 0.963 - - 0.963 - - - Mlig455_002592 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: Rabaptin-like protein [PF09311.13, score=107.3]; FYVE zinc finger [PF01363.23, score=25.6]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.1]} {Human: ENSG00000029725, RABEP1, rabaptin, RAB GTPase binding effector protein 1, [RH, Score=78.2, Expect=1e-14]} {Mouse: ENSMUSG00000020817, Rabep1, rabaptin, RAB GTPase binding effector protein 1, [RH, Score=76.3, Expect=3e-14]} {Dmel: FBgn0034585, Rbpn-5, Rabaptin-5, [Score=144, Expect=6e-37]} {Celegans: WBGene00017161, rabn-5, RABaptiN (Rab effector), [RH, Score=178, Expect=5e-51]} {Smed: dd_Smed_v6_5961_0_1, dd_Smed_v6_5961_0_1, [RH, Score=164, Expect=7e-44]} {RNA1509_22986} {RNA1310_17533.1, RNA1509_22986} {RNA1509_22986, RNA815_6270}
26. MligTC455_19844 270 5.62 Mlig455_068340

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_068340 {REF} {Length: 348} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_28703} {RNA1310_21339} {RNA815_12138.1}
27. MligTC455_43850 330 6.88 Mlig455_039408

Neo: Irradiation

Age: -

 0.959 - - 0.959 - - - Mlig455_039408 {REF} {Length: 3313} {TRANSSPLICED} {Pfam: Rieske [2Fe-2S] domain [PF00355.28, score=30.0]} {Smed: dd_Smed_v6_8988_0_3, dd_Smed_v6_8988_0_3, [RH, Score=85.1, Expect=1e-18]} {RNA1509_42363} {RNA1310_20471.1, RNA1509_42363} {RNA1509_42363, RNA815_18260}
28. MligTC455_47797 540 11.25 Mlig455_026443, Mlig455_026475

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.381

 TMEM222 0.959 - - 0.959 - - -

Mlig455_026443 {REF} {Length: 6387} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=78.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.0]; Ring finger domain [PF13639.8, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=129, Expect=3e-34]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=124, Expect=2e-32]} {Dmel: FBgn0032000, CG8372, [Score=118, Expect=8e-31]} {Celegans: WBGene00019221, H20J04.6, [Score=124, Expect=5e-33]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=134, Expect=8e-37]} {RNA1509_32293} {RNA1310_12215.2} {RNA815_8332}

Mlig455_026475 {REF} {Length: 2505} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.9]; Ring finger domain [PF13639.8, score=23.2]} {RNA1509_32293} {RNA1310_12215.2, RNA1509_32293} {RNA1509_32293, RNA815_8332}
29. MligTC455_33626 159 3.32 Mlig455_027968

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_027968 {REF} {Length: 4332} {Pfam: Transducer of regulated CREB activity, N terminus [PF12884.9, score=29.6]} {RNA1509_26956} {RNA1310_8476, RNA1509_26956} {RNA1509_26956, RNA815_20817}
30. MligTC455_45298 125 2.59 Mlig455_042414

Neo: Irradiation

Age: -

Region-enriched R5: 4.149/0.00000
Region-enriched R6: 2.982/0.04478

 ZIC5 0.956 - - 0.956 - - - Mlig455_042414 {REF} {Length: 3878} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=62.7]; Zinc-finger double domain [PF13465.8, score=62.0]; Zic proteins zinc finger domain [PF18366.3, score=50.1]; C2H2-type zinc finger [PF13894.8, score=35.6]} {Human: ENSG00000139800, ZIC5, Zic family member 5, [RH, Score=279, Expect=4e-86]; ENSG00000152977, ZIC1, Zic family member 1, [RH, Score=275, Expect=7e-87]; ENSG00000156925, ZIC3, Zic family member 3, [RH, Score=274, Expect=1e-86]; ENSG00000043355, ZIC2, Zic family member 2, [RH, Score=273, Expect=2e-85]; ENSG00000174963, ZIC4, Zic family member 4, [RH, Score=270, Expect=7e-86]} {Mouse: ENSMUSG00000041703, Zic5, zinc finger protein of the cerebellum 5, [RH, Score=282, Expect=6e-88]; ENSMUSG00000032368, Zic1, zinc finger protein of the cerebellum 1, [RH, Score=275, Expect=4e-87]; ENSMUSG00000067860, Zic3, zinc finger protein of the cerebellum 3, [RH, Score=273, Expect=4e-86]; ENSMUSG00000061524, Zic2, zinc finger protein of the cerebellum 2, [RH, Score=273, Expect=1e-85]; ENSMUSG00000036972, Zic4, zinc finger protein of the cerebellum 4, [RH, Score=271, Expect=3e-87]} {Dmel: FBgn0003002, opa, odd paired, [RH, Score=286, Expect=9e-90]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=182, Expect=1e-53]} {Smed: dd_Smed_v6_22585_0_1, dd_Smed_v6_22585_0_1, [RH, Score=298, Expect=1e-95]} {RNA1509_20828} {RNA1310_13529.1} {RNA815_17611}
31. MligTC455_48567 358 7.45 Mlig455_043150

Neo: -

Age: -

Region-enriched R5: 1.668/0.02982

 0.955 - - 0.955 - - - Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1}
32. MligTC455_15458 504 10.51 Mlig455_013729

Neo: Germline

Age: logFC(26M/2M)=0.298

 0.953 - - 0.953 - - - Mlig455_013729 {REF} {Length: 1760} {RNA1509_35807} {RNA1310_53429, RNA1509_35807} {RNA1509_35807, RNA815_15657}
33. MligTC455_15888 446 9.29 Mlig455_056804, Mlig455_056842

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.356/0.00867

 0.952 - - 0.952 - - -

Mlig455_056804 {REF} {Length: 4137} {TRANSSPLICED} {RNA1509_39238} {RNA1310_8991, RNA1509_39238} {RNA1509_39238, RNA815_19267}

Mlig455_056842 {REF} {Length: 2866} {TRANSSPLICED} {RNA1509_39238} {RNA1310_8991} {RNA815_19267}
34. MligTC455_37515 150 3.12 Mlig455_031636

Neo: -

Age: Up-Down-Down

 JDP2 0.951 - - 0.951 - - - Mlig455_031636 {REF} {Length: 1738} {Pfam: bZIP transcription factor [PF00170.23, score=32.0]; Basic region leucine zipper [PF07716.17, score=30.0]; bZIP Maf transcription factor [PF03131.19, score=26.2]} {Human: ENSG00000140044, JDP2, Jun dimerization protein 2, [Score=47.8, Expect=5e-06]; ENSG00000123685, BATF3, basic leucine zipper ATF-like transcription factor 3, [Score=46.2, Expect=7e-06]} {Mouse: ENSMUSG00000040270, Bach2, BTB and CNC homology, basic leucine zipper transcription factor 2, [Score=48.5, Expect=9e-06]; ENSMUSG00000034271, Jdp2, Jun dimerization protein 2, [Score=47.4, Expect=4e-06]; ENSMUSG00000026628, Atf3, activating transcription factor 3, [Score=46.2, Expect=1e-05]} {Dmel: FBgn0001297, kay, kayak, [Score=58.9, Expect=2e-09]}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA