Data search
Results for MligTC455_51317
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51317 | 9 | 0.18 | Mlig455_030618 | Neo: Irradiation Age: - |
Mlig455_030618 {REF} {Length: 820} {RNA1509_9989} {RNA1310_94733.1} {RNA815_12566.4} |
Cumulative graph for MligTC455_51317
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_51317
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51317 | 9 | 0.18 | Mlig455_030618 | Neo: Irradiation Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_030618 {REF} {Length: 820} {RNA1509_9989} {RNA1310_94733.1} {RNA815_12566.4} | |
| 2. | MligTC455_27868 | 22 | 0.47 | Mlig455_045469 | Neo: - Age: - |
0.98 | - | - | - | - | 0.980 | - | Mlig455_045469 {REF} {Length: 4632} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=70.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.7]; Integrase zinc binding domain [PF17921.3, score=53.5]; Integrase core domain [PF00665.28, score=49.2]; Zinc knuckle [PF00098.25, score=25.6]; Integrase core domain [PF13683.8, score=23.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=278, Expect=7e-78]} {RNA1509_44038} {RNA1310_11212} {RNA815_23682} | |
| 3. | MligTC455_35220 | 430 | 8.96 | Mlig455_057315 | Neo: - Age: - |
0.972 | - | - | - | - | 0.972 | - | Mlig455_057315 {REF} {Length: 2102} {TRANSSPLICED} {RNA1509_28464} {RNA1310_5172} {RNA815_3315} | |
| 4. | MligTC455_02590 | 19 | 0.4 | Mlig455_027316 | Neo: - |
MX2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_027316 {REF} {Length: 3400} {Pfam: Dynamin central region [PF01031.22, score=151.8]; Family with sequence similarity 184, A and B [PF15665.7, score=21.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=124, Expect=6e-31]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=121, Expect=3e-30]} {RNA1509_19894} {RNA1310_7243} {RNA815_3194} |
| 5. | MligTC455_40822 | 53 | 1.1 | Mlig455_041922 | Neo: - Age: Down-Up-Down Region-enriched R5: 3.132/0.04294 |
PARPBP | 0.954 | - | - | - | - | 0.954 | - | Mlig455_041922 {REF} {Length: 3695} {Human: ENSG00000185480, PARPBP, PARP1 binding protein, [RH, Score=77.8, Expect=2e-15]} {Mouse: ENSMUSG00000035365, Parpbp, PARP1 binding protein, [RH, Score=79.3, Expect=4e-15]} {Smed: dd_Smed_v6_34200_0_1, dd_Smed_v6_34200_0_1, [RH, Score=81.3, Expect=3e-16]} {RNA1509_46952} {RNA1310_6393.1} {RNA815_2577.1} |
| 6. | MligTC455_46404 | 36 | 0.74 | Mlig455_031747 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_031747 {REF} {Length: 613} {TRANSSPLICED} {RNA1310_50941.2} {RNA815_26807} |
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