TomoSeq data search

Data search

Results for MligTC455_51706

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51706

247

5.15

Mlig455_051617

Neo: -

Age: -

EAF1

Mlig455_051617 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=88.2, Expect=1e-18]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_52015} {RNA1310_20563, RNA1509_52015} {RNA1509_52015, RNA815_8303}

Cumulative graph for MligTC455_51706

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.576	2.953	0.08533	0.63513
RegionR2	1.189	2.953	0.23607	0.60971
RegionR3	1.267	2.953	0.09042	0.53117
RegionR4	-0.211	2.953	0.91111	1.00000
RegionR5	1.508	2.953	0.01640	0.08375
RegionR6	1.202	2.953	0.13604	0.66250
RegionR7	0.858	2.953	0.43627	1.00000
RegionR8	0.763	2.953	0.54809	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.114	2.953	1.00000	1.00000
RegenerationR2	1.267	2.953	0.01908	0.22714
RegenerationR3	1.447	2.953	0.00825	0.16575
RegenerationR4	1.695	2.953	0.00394	0.08599
RegenerationR5	0.757	2.953	0.09404	0.46991
RegenerationR6	1.431	2.953	0.01118	0.13038
RegenerationBL	2.261	2.953	0.00092	0.02161
RegenerationTP	1.496	2.953	0.07142	0.42875

Genes with expression patterns similar to MligTC455_51706

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51706	247	5.15	Mlig455_051617	Neo: - Age: -	EAF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051617 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=88.2, Expect=1e-18]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_52015} {RNA1310_20563, RNA1509_52015} {RNA1509_52015, RNA815_8303}
2.	MligTC455_51704	158	3.29	Mlig455_051585	Neo: - Age: -	EAF1	2.921	0.979	0.982	-	-	-	0.960	Mlig455_051585 {REF} {Length: 1822} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=53.4]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [Score=87.0, Expect=2e-20]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [Score=87.0, Expect=1e-20]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [Score=68.2, Expect=2e-13]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [Score=71.2, Expect=2e-15]} {RNA1509_52015} {RNA1310_64746} {RNA815_8303}
3.	MligTC455_22933	497	10.36	Mlig455_043362	Neo: - Age: -	CNPY2	2.494	0.763	-	-	-	0.762	0.969	Mlig455_043362 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=79.6]} {Human: ENSG00000257727, CNPY2, canopy FGF signaling regulator 2, [RH, Score=70.5, Expect=2e-14]; ENSG00000144785, AC073896.1, novel protein, [RH, Score=69.7, Expect=2e-13]} {Mouse: ENSMUSG00000025381, Cnpy2, canopy FGF signaling regulator 2, [RH, Score=68.2, Expect=1e-13]} {Celegans: WBGene00017169, F01F1.15, [Score=56.6, Expect=1e-09]} {RNA1509_46925, RNA1509_52897} {RNA1310_13660.1, RNA1509_46925, RNA1509_52897} {RNA1509_46925, RNA1509_52897, RNA815_7407.1}
4.	MligTC455_32867	441	9.19	Mlig455_028342	Neo: - Age: -	EMSY	0.981	-	-	-	-	-	0.981	Mlig455_028342 {REF} {Length: 2127} {TRANSSPLICED} {Pfam: ENT domain [PF03735.16, score=51.4]} {Human: ENSG00000158636, EMSY, EMSY, BRCA2 interacting transcriptional repressor, [Score=63.9, Expect=4e-10]} {Mouse: ENSMUSG00000035401, Emsy, EMSY, BRCA2-interacting transcriptional repressor, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0031377, CG15356, [Score=62.8, Expect=3e-10]} {Smed: dd_Smed_v6_10628_0_2, dd_Smed_v6_10628_0_2, [Score=65.5, Expect=3e-11]} {RNA1509_23176} {RNA1310_12450} {RNA815_4381}
5.	MligTC455_53897	30	0.62	Mlig455_018385	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_018385 {REF} {Length: 1831} {Pfam: Presenilin [PF01080.19, score=25.7]} {RNA1509_47157} {RNA1310_26868} {RNA815_54035}
6.	MligTC455_22792	813	16.94	Mlig455_006911	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.573	PPP1R10	0.963	-	-	-	-	-	0.963	Mlig455_006911 {REF} {Length: 4431} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=34.5} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=20.9]; Negative regulator of genetic competence (MecA) [PF05389.14, score=18.7]} {Human: ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0053526, PNUTS, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [Score=93.2, Expect=2e-19]} {RNA1509_35861, RNA1509_3759, RNA1509_41300} {RNA1310_6625, RNA1509_35861, RNA1509_41300} {RNA1509_35861, RNA1509_41300, RNA815_5489}
7.	MligTC455_41238	268	5.58	Mlig455_014819	Neo: - Age: -	NDOR1	0.962	-	-	-	-	-	0.962	Mlig455_014819 {REF} {Length: 5603} {Pfam: Flavodoxin [PF00258.27, score=66.4]; FAD binding domain [PF00667.22, score=60.7]; Oxidoreductase NAD-binding domain [PF00175.23, score=43.6]} {Human: ENSG00000188566, NDOR1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=361, Expect=3e-115]} {Mouse: ENSMUSG00000006471, Ndor1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=363, Expect=2e-116]} {Dmel: FBgn0035890, CG13667, [RH, Score=295, Expect=1e-90]} {Celegans: WBGene00001485, fre-1, NADPH-dependent diflavin oxidoreductase 1, [RH, Score=300, Expect=7e-93]} {Smed: dd_Smed_v6_17265_0_1, dd_Smed_v6_17265_0_1, [RH, Score=339, Expect=1e-107]} {RNA1509_17019, RNA1509_19226} {RNA1310_9966, RNA1509_17019} {RNA1509_17019, RNA815_3436}
8.	MligTC455_32863	188	3.91	Mlig455_028353	Neo: Int S/G2/M Age: Up-Up-Down		0.961	-	-	-	-	-	0.961	Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
9.	MligTC455_49391	1700	35.41	Mlig455_040829, Mlig455_040928, Mlig455_049169	Neo: - Age: Down-Up-Up		0.961	-	-	-	-	-	0.961	Mlig455_040829 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199} {RNA1310_39586, RNA1509_19199} {RNA1509_19199, RNA815_40218} Mlig455_040928 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199, RNA1509_30421, RNA1509_55207} {RNA1310_39586, RNA1509_30421, RNA1509_55207} {RNA1509_30421, RNA1509_55207, RNA815_40218} Mlig455_049169 {REF} {Length: 836} {RNA1509_19199} {RNA1310_39586} {RNA815_40218}
10.	MligTC455_30629	803	16.73	Mlig455_066612	Neo: - Age: - Region-enriched R5: 1.551/0.02318	GALK1	0.959	-	-	-	-	-	0.959	Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890}
11.	MligTC455_40541	246	5.13	Mlig455_020101	Neo: - Age: -	UBE3C	0.956	-	-	-	-	-	0.956	Mlig455_020101 {REF} {Length: 4310} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=262.7]} {Human: ENSG00000009335, UBE3C, ubiquitin protein ligase E3C, [RH, Score=384, Expect=2e-115]} {Mouse: ENSMUSG00000039000, Ube3c, ubiquitin protein ligase E3C, [RH, Score=364, Expect=3e-108]} {Dmel: FBgn0034989, CG3356, [RH, Score=352, Expect=6e-104]} {Celegans: WBGene00008429, etc-1, E3 ubiquitin-protein ligase etc-1, [RH, Score=255, Expect=2e-70]} {Smed: dd_Smed_v6_8915_0_1, dd_Smed_v6_8915_0_1, [RH, Score=318, Expect=5e-92]} {RNA1509_7273} {RNA1310_2336, RNA1509_7273} {RNA1509_7273, RNA815_688.1}
12.	MligTC455_48485	288	6	Mlig455_012655	Neo: Int S/G2/M Age: -	PRPSAP2	0.953	-	-	-	-	0.953	-	Mlig455_012655 {REF} {Length: 2503} {TRANSSPLICED} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=267.6]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=122.0]; Phosphoribosyl transferase domain [PF00156.29, score=29.8]} {Human: ENSG00000141127, PRPSAP2, phosphoribosyl pyrophosphate synthetase associated protein 2, [Score=379, Expect=8e-130]} {Mouse: ENSMUSG00000020528, Prpsap2, phosphoribosyl pyrophosphate synthetase-associated protein 2, [Score=376, Expect=5e-129]; ENSMUSG00000015869, Prpsap1, phosphoribosyl pyrophosphate synthetase-associated protein 1, [Score=359, Expect=3e-122]} {Dmel: FBgn0039790, CG2246, [RH, Score=429, Expect=2e-149]} {Celegans: WBGene00012258, W04G3.5, [RH, Score=403, Expect=3e-140]} {Smed: dd_Smed_v6_4658_0_1, dd_Smed_v6_4658_0_1, [RH, Score=462, Expect=3e-163]} {RNA1509_48717} {RNA1310_19663.2, RNA1509_48717} {RNA1509_48717, RNA815_17008}
13.	MligTC455_49081	472	9.84	Mlig455_068529	Neo: - Age: - Region-enriched R5: 1.779/0.02721	CANX	0.952	-	-	-	-	-	0.952	Mlig455_068529 {REF} {Length: 2120} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=463.2]} {Human: ENSG00000127022, CANX, calnexin, [Score=479, Expect=5e-163]; ENSG00000283777, CANX, calnexin, [Score=479, Expect=5e-163]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=468, Expect=1e-158]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=402, Expect=4e-133]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=391, Expect=1e-128]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=517, Expect=4e-178]} {RNA1509_44465} {RNA1310_13618.2} {RNA815_14640}
14.	MligTC455_16028	344	7.16	Mlig455_015204	Neo: Int S/G2/M Age: -	CDK11B	0.951	-	-	-	-	-	0.951	Mlig455_015204 {REF} {Length: 4653} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=214.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=96.5]; BTB/POZ domain [PF00651.33, score=83.1]; Kinase-like [PF14531.8, score=22.2]; Peptidase family S64 [PF08192.13, score=17.8]} {Human: ENSG00000248333, CDK11B, cyclin dependent kinase 11B, [RH, Score=513, Expect=6e-165]; ENSG00000008128, CDK11A, cyclin dependent kinase 11A, [RH, Score=507, Expect=2e-162]} {Mouse: ENSMUSG00000029062, Cdk11b, cyclin-dependent kinase 11B, [RH, Score=511, Expect=2e-164]} {Dmel: FBgn0016696, Pitslre, [RH, Score=499, Expect=1e-157]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [RH, Score=432, Expect=2e-135]} {Smed: dd_Smed_v6_3540_0_3, dd_Smed_v6_3540_0_3, [RH, Score=495, Expect=4e-159]} {RNA1509_23995} {RNA1310_10655, RNA1509_23995} {RNA1509_23995, RNA815_5865}

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