Data search
Results for MligTC455_32867
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32867 | 441 | 9.19 | Mlig455_028342 | Neo: - Age: - |
EMSY | Mlig455_028342 {REF} {Length: 2127} {TRANSSPLICED} {Pfam: ENT domain [PF03735.16, score=51.4]} {Human: ENSG00000158636, EMSY, EMSY, BRCA2 interacting transcriptional repressor, [Score=63.9, Expect=4e-10]} {Mouse: ENSMUSG00000035401, Emsy, EMSY, BRCA2-interacting transcriptional repressor, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0031377, CG15356, [Score=62.8, Expect=3e-10]} {Smed: dd_Smed_v6_10628_0_2, dd_Smed_v6_10628_0_2, [Score=65.5, Expect=3e-11]} {RNA1509_23176} {RNA1310_12450} {RNA815_4381} |
Cumulative graph for MligTC455_32867
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.076 | 3.595 | 0.45224 | 1.00000 | |
| RegionR2 | 0.313 | 3.595 | 0.55866 | 0.92157 | |
| RegionR3 | 0.318 | 3.595 | 0.46989 | 0.97546 | |
| RegionR4 | 0.339 | 3.595 | 0.46903 | 0.79707 | |
| RegionR5 | 0.701 | 3.595 | 0.06418 | 0.22385 | |
| RegionR6 | 0.505 | 3.595 | 0.25502 | 0.83961 | |
| RegionR7 | -0.322 | 3.595 | 0.63219 | 1.00000 | |
| RegionR8 | -0.779 | 3.595 | 0.39561 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.434 | 3.595 | 0.59010 | 1.00000 | |
| RegenerationR2 | 0.194 | 3.595 | 0.60313 | 0.91714 | |
| RegenerationR3 | -0.16 | 3.595 | 0.71045 | 0.95173 | |
| RegenerationR4 | -0.012 | 3.595 | 0.97813 | 1.00000 | |
| RegenerationR5 | 0.427 | 3.595 | 0.23434 | 0.66812 | |
| RegenerationR6 | 0.291 | 3.595 | 0.49117 | 0.79984 | |
| RegenerationBL | 0.471 | 3.595 | 0.44287 | 0.81003 | |
| RegenerationTP | 0.554 | 3.595 | 0.44547 | 0.86464 |
Genes with expression patterns similar to MligTC455_32867
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32867 | 441 | 9.19 | Mlig455_028342 | Neo: - Age: - |
EMSY | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028342 {REF} {Length: 2127} {TRANSSPLICED} {Pfam: ENT domain [PF03735.16, score=51.4]} {Human: ENSG00000158636, EMSY, EMSY, BRCA2 interacting transcriptional repressor, [Score=63.9, Expect=4e-10]} {Mouse: ENSMUSG00000035401, Emsy, EMSY, BRCA2-interacting transcriptional repressor, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0031377, CG15356, [Score=62.8, Expect=3e-10]} {Smed: dd_Smed_v6_10628_0_2, dd_Smed_v6_10628_0_2, [Score=65.5, Expect=3e-11]} {RNA1509_23176} {RNA1310_12450} {RNA815_4381} |
| 2. | MligTC455_22622 | 253 | 5.27 | Mlig455_069069 | Neo: - Age: - Regeneration-upregulated R6: 2.381 Regeneration-enriched R6: 2.381 |
ATRX | 2.562 | 0.831 | - | - | - | 0.770 | 0.961 | Mlig455_069069 {REF} {Length: 7313} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.0]; Helicase conserved C-terminal domain [PF00271.33, score=51.8]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [Score=757, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [RH, Score=759, Expect=0.0]} {Dmel: FBgn0039338, XNP, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=626, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=456, Expect=2e-139]} {RNA1509_2800} {RNA1310_990, RNA1509_2800} {RNA1509_2800, RNA815_839} |
| 3. | MligTC455_49391 | 1700 | 35.41 | Mlig455_040829, Mlig455_040928, Mlig455_049169 | Neo: - Age: Down-Up-Up |
1.722 | - | - | 0.751 | - | - | 0.971 | Mlig455_040829 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199} {RNA1310_39586, RNA1509_19199} {RNA1509_19199, RNA815_40218} Mlig455_040928 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199, RNA1509_30421, RNA1509_55207} {RNA1310_39586, RNA1509_30421, RNA1509_55207} {RNA1509_30421, RNA1509_55207, RNA815_40218} Mlig455_049169 {REF} {Length: 836} {RNA1509_19199} {RNA1310_39586} {RNA815_40218} |
|
| 4. | MligTC455_38540 | 303 | 6.32 | Mlig455_060217 | Neo: - Age: - Region-enriched R5: 2.468/0.00715 |
1.694 | - | - | 0.716 | - | - | 0.978 | Mlig455_060217 {REF} {Length: 1501} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=53.7]} {RNA1509_22974} {RNA1310_35264} {RNA815_10669} | |
| 5. | MligTC455_25171 | 260 | 5.42 | Mlig455_068373 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.564/0.00118 |
1.669 | - | - | - | 0.712 | - | 0.957 | Mlig455_068373 {REF} {Length: 554} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27649} {RNA1310_34727.2} {RNA815_19653} | |
| 6. | MligTC455_26646 | 1270 | 26.47 | Mlig455_036193, Mlig455_036200 | Neo: Irradiation Age: - Region-enriched R4: 2.027/0.00054 Regeneration-downregulated R4: -2.228 Regeneration-depleted R4: -2.228 |
GIPC3, PTPN23 | 1.668 | - | - | - | 0.714 | 0.954 | - | Mlig455_036193 {REF} {Length: 6626} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=62.9]} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=58.9, Expect=7e-08]} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=70.9, Expect=1e-11]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=99.8, Expect=1e-20]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [Score=54.7, Expect=3e-07]} {Smed: dd_Smed_v6_3351_0_2, dd_Smed_v6_3351_0_2, [Score=126, Expect=5e-29]} {RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1310_12276.2, RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1509_13027, RNA1509_26323, RNA1509_55968, RNA815_6413} Mlig455_036200 {REF} {Length: 8454} {Pfam: BRO1-like domain [PF03097.20, score=305.8]; ALIX V-shaped domain binding to HIV [PF13949.8, score=96.6]; Protein-tyrosine phosphatase [PF00102.29, score=75.4]} {Human: ENSG00000076201, PTPN23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=408, Expect=1e-115]} {Mouse: ENSMUSG00000036057, Ptpn23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=412, Expect=5e-117]} {Dmel: FBgn0036448, mop, myopic, [RH, Score=371, Expect=1e-103]} {Celegans: WBGene00001215, ego-2, Enhancer of Glp-One (Glp-1); Enhancer of glp-1, [RH, Score=260, Expect=1e-69]} {Smed: dd_Smed_v6_3351_0_1, dd_Smed_v6_3351_0_1, [RH, Score=424, Expect=2e-121]} {RNA1509_6410} {RNA1310_2882.1} {RNA815_3253.1} |
| 7. | MligTC455_51706 | 247 | 5.15 | Mlig455_051617 | Neo: - Age: - |
EAF1 | 0.981 | - | - | - | - | - | 0.981 | Mlig455_051617 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=88.2, Expect=1e-18]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_52015} {RNA1310_20563, RNA1509_52015} {RNA1509_52015, RNA815_8303} |
| 8. | MligTC455_22792 | 813 | 16.94 | Mlig455_006911 | Neo: - |
PPP1R10 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_006911 {REF} {Length: 4431} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=34.5} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=20.9]; Negative regulator of genetic competence (MecA) [PF05389.14, score=18.7]} {Human: ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0053526, PNUTS, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [Score=93.2, Expect=2e-19]} {RNA1509_35861, RNA1509_3759, RNA1509_41300} {RNA1310_6625, RNA1509_35861, RNA1509_41300} {RNA1509_35861, RNA1509_41300, RNA815_5489} |
| 9. | MligTC455_41238 | 268 | 5.58 | Mlig455_014819 | Neo: - Age: - |
NDOR1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_014819 {REF} {Length: 5603} {Pfam: Flavodoxin [PF00258.27, score=66.4]; FAD binding domain [PF00667.22, score=60.7]; Oxidoreductase NAD-binding domain [PF00175.23, score=43.6]} {Human: ENSG00000188566, NDOR1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=361, Expect=3e-115]} {Mouse: ENSMUSG00000006471, Ndor1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=363, Expect=2e-116]} {Dmel: FBgn0035890, CG13667, [RH, Score=295, Expect=1e-90]} {Celegans: WBGene00001485, fre-1, NADPH-dependent diflavin oxidoreductase 1, [RH, Score=300, Expect=7e-93]} {Smed: dd_Smed_v6_17265_0_1, dd_Smed_v6_17265_0_1, [RH, Score=339, Expect=1e-107]} {RNA1509_17019, RNA1509_19226} {RNA1310_9966, RNA1509_17019} {RNA1509_17019, RNA815_3436} |
| 10. | MligTC455_12932 | 233 | 4.86 | Mlig455_068053 | Neo: - Age: Down-Down-Up Region-enriched R2: 2.157/0.04323 |
ANKRD40 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_068053 {REF} {Length: 4350} {Pfam: OCRE domain [PF17780.3, score=45.6]; Ankyrin repeats (many copies) [PF13637.8, score=34.0]; Ankyrin repeat [PF00023.32, score=31.1]; Ankyrin repeats (3 copies) [PF12796.9, score=30.9]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000154945, ANKRD40, ankyrin repeat domain 40, [RH, Score=94.0, Expect=6e-20]} {Mouse: ENSMUSG00000020864, Ankrd40, ankyrin repeat domain 40, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0031319, CG4896, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00011270, R31.2, [RH, Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_2392_0_2, dd_Smed_v6_2392_0_2, [Score=58.2, Expect=1e-08]} {RNA1509_49616, RNA1509_49906} {RNA1310_18118, RNA1509_49906} {RNA1509_49906, RNA815_7502} |
| 11. | MligTC455_22416 | 437 | 9.1 | Mlig455_010847 | Neo: - Age: - |
NPRL2 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_010847 {REF} {Length: 3992} {TRANSSPLICED} {Pfam: Nitrogen permease regulator 2 [PF06218.13, score=192.6]} {Human: ENSG00000114388, NPRL2, NPR2 like, GATOR1 complex subunit, [RH, Score=243, Expect=2e-76]} {Mouse: ENSMUSG00000010057, Nprl2, NPR2 like, GATOR1 complex subunit, [RH, Score=246, Expect=1e-77]} {Dmel: FBgn0030800, Nprl2, Nitrogen permease regulator-like 2, [RH, Score=189, Expect=8e-56]} {Celegans: WBGene00018635, nprl-2, Nitrogen Permease Regulator Like homolog, [RH, Score=119, Expect=1e-29]} {RNA1509_21426} {RNA1310_23001.1} {RNA815_8901} |
| 12. | MligTC455_45485 | 766 | 15.96 | Mlig455_004917 | Neo: - Age: - |
DLG2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_004917 {REF} {Length: 3289} {Pfam: Guanylate kinase [PF00625.23, score=164.7]; PDZ domain [PF00595.26, score=69.8]; PDZ domain [PF17820.3, score=37.6]; SH3 domain [PF00018.30, score=33.0]; Variant SH3 domain [PF07653.19, score=27.3]; PDZ domain [PF13180.8, score=22.1]; Variant SH3 domain [PF14604.8, score=20.5]} {Human: ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [RH, Score=436, Expect=1e-141]; ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=418, Expect=7e-137]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=435, Expect=9e-143]; ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=414, Expect=3e-135]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=446, Expect=2e-146]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [RH, Score=357, Expect=5e-112]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [RH, Score=322, Expect=4e-103]} {RNA1509_19643, RNA1509_26114, RNA1509_42144} {RNA1310_2555.1, RNA1509_19643, RNA1509_26114, RNA1509_42144} {RNA1509_19643, RNA1509_26114, RNA1509_42144, RNA815_2319} |
| 13. | MligTC455_52846 | 289 | 6.03 | Mlig455_043189 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 2.322 Regeneration-enriched BL: 2.322 |
PHF12 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_043189 {REF} {Length: 2501} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=58.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=94.7, Expect=8e-20]} {Dmel: FBgn0029861, CG3815, [RH, Score=106, Expect=1e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [RH, Score=148, Expect=2e-37]} {RNA1509_54500} {RNA1310_6431} {RNA815_5155} |
| 14. | MligTC455_32339 | 311 | 6.48 | Mlig455_053508 | Neo: Irradiation |
SLC37A2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_053508 {REF} {Length: 5768} {Pfam: Major Facilitator Superfamily [PF07690.18, score=128.8]; Calponin homology (CH) domain [PF00307.33, score=86.3]; CAMSAP CH domain [PF11971.10, score=23.8]} {Human: ENSG00000134955, SLC37A2, solute carrier family 37 member 2, [Score=491, Expect=4e-161]} {Mouse: ENSMUSG00000032122, Slc37a2, solute carrier family 37 (glycerol-3-phosphate transporter), member 2, [Score=496, Expect=4e-163]; ENSMUSG00000024036, Slc37a1, solute carrier family 37 (glycerol-3-phosphate transporter), member 1, [Score=476, Expect=6e-155]} {Dmel: FBgn0034611, MFS16, Major Facilitator Superfamily Transporter 16, [Score=438, Expect=2e-140]} {Celegans: WBGene00011718, T11G6.3, [Score=183, Expect=2e-49]} {Smed: dd_Smed_v6_8095_0_1, dd_Smed_v6_8095_0_1, [RH, Score=486, Expect=7e-159]} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1} |
| 15. | MligTC455_45585 | 1813 | 37.77 | Mlig455_047383 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.249 |
CSNK2A1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_047383 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.5]; Phosphotransferase enzyme family [PF01636.25, score=24.8]; Fungal protein kinase [PF17667.3, score=20.2]} {Human: ENSG00000101266, CSNK2A1, casein kinase 2 alpha 1, [RH, Score=555, Expect=0.0]; ENSG00000254598, CSNK2A3, casein kinase 2 alpha 3, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000101523, Gm10031, predicted pseudogene 10031, [RH, Score=554, Expect=0.0]; ENSMUSG00000074698, Csnk2a1, casein kinase 2, alpha 1 polypeptide, [RH, Score=554, Expect=0.0]} {Dmel: FBgn0264492, CkIIalpha, casein kinase IIalpha, [RH, Score=539, Expect=0.0]} {Celegans: WBGene00002191, kin-3, Casein kinase II subunit alpha, [RH, Score=513, Expect=0.0]} {Smed: dd_Smed_v6_6315_0_2, dd_Smed_v6_6315_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_3405} {RNA1310_5348.1} {RNA815_5742} |
Berezikov Lab - 2020-2021 © ERIBA