Data search
Results for MligTC455_51740
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51740 | 453 | 9.45 | Mlig455_056894 | Neo: Irradiation Age: - Region-enriched R5: 1.157/0.00158 |
MARS | Mlig455_056894 {REF} {Length: 4232} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=24.5} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=498.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=54.0]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=39.3]} {Human: ENSG00000166986, MARS, methionyl-tRNA synthetase, [RH, Score=798, Expect=0.0]} {Mouse: ENSMUSG00000040354, Mars, methionine-tRNA synthetase, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0034401, MetRS, Methionyl-tRNA synthetase, [RH, Score=744, Expect=0.0]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=698, Expect=0.0]} {Smed: dd_Smed_v6_3471_0_1, dd_Smed_v6_3471_0_1, [RH, Score=671, Expect=0.0]} {RNA1509_29874} {RNA1310_13250.1, RNA1509_29874} {RNA1509_29874, RNA815_453.1} |
Cumulative graph for MligTC455_51740
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.233 | 3.508 | 0.78676 | 1.00000 | |
| RegionR2 | 1.174 | 3.508 | 0.02800 | 0.18870 | |
| RegionR3 | -0.677 | 3.508 | 0.10109 | 0.55694 | |
| RegionR4 | -1.999 | 3.508 | 0.00003 | 0.00053 | |
| RegionR5 | 1.157 | 3.508 | 0.00009 | 0.00158 | |
| RegionR6 | -0.209 | 3.508 | 0.62051 | 1.00000 | |
| RegionR7 | 1.054 | 3.508 | 0.03775 | 0.37194 | |
| RegionR8 | -0.268 | 3.508 | 0.76073 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.317 | 3.508 | 0.29017 | 0.98886 | |
| RegenerationR2 | -0.07 | 3.508 | 0.88330 | 1.00000 | |
| RegenerationR3 | 1.304 | 3.508 | 0.01083 | 0.19007 | |
| RegenerationR4 | 1.308 | 3.508 | 0.00585 | 0.10949 | |
| RegenerationR5 | 0.038 | 3.508 | 0.89379 | 1.00000 | |
| RegenerationR6 | 1.135 | 3.508 | 0.02674 | 0.20470 | |
| RegenerationBL | 0.733 | 3.508 | 0.28656 | 0.64822 | |
| RegenerationTP | -1.177 | 3.508 | 0.20899 | 0.65079 |
Genes with expression patterns similar to MligTC455_51740
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51740 | 453 | 9.45 | Mlig455_056894 | Neo: Irradiation Age: - Region-enriched R5: 1.157/0.00158 |
MARS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056894 {REF} {Length: 4232} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=24.5} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=498.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=54.0]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=39.3]} {Human: ENSG00000166986, MARS, methionyl-tRNA synthetase, [RH, Score=798, Expect=0.0]} {Mouse: ENSMUSG00000040354, Mars, methionine-tRNA synthetase, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0034401, MetRS, Methionyl-tRNA synthetase, [RH, Score=744, Expect=0.0]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=698, Expect=0.0]} {Smed: dd_Smed_v6_3471_0_1, dd_Smed_v6_3471_0_1, [RH, Score=671, Expect=0.0]} {RNA1509_29874} {RNA1310_13250.1, RNA1509_29874} {RNA1509_29874, RNA815_453.1} |
| 2. | MligTC455_39646 | 934 | 19.46 | Mlig455_021914 | Neo: Neoblast, stringent |
SF3A3 | 3.203 | 0.717 | - | 0.752 | - | 0.784 | 0.950 | Mlig455_021914 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=144.3]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [Score=243, Expect=9e-77]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [Score=243, Expect=3e-77]} {Dmel: FBgn0014366, noi, noisette, [Score=253, Expect=9e-81]} {Celegans: WBGene00011758, T13H5.4, [Score=206, Expect=3e-63]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [Score=207, Expect=3e-63]} {RNA1509_27195} {RNA1310_12410} {RNA815_13038} |
| 3. | MligTC455_47490 | 338 | 7.05 | Mlig455_007581 | Neo: Irradiation Age: - Region-specific R5: 2.714 Region-enriched R5: 2.111/0.00000 |
TUT7 | 1.882 | 0.923 | - | - | - | - | 0.959 | Mlig455_007581 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=36.1]} {Human: ENSG00000083223, TUT7, terminal uridylyl transferase 7, [Score=53.5, Expect=2e-06]} {RNA1509_22764, RNA1509_41081, RNA1509_43617, RNA1509_43646} {RNA1310_6443.1, RNA1509_41081, RNA1509_43617, RNA1509_43646} {RNA1509_41081, RNA1509_43617, RNA1509_43646, RNA815_24098} |
| 4. | MligTC455_42387 | 458 | 9.54 | Mlig455_014475 | Neo: - Age: - Region-enriched R5: 2.653/0.00000 |
MYLIP | 1.784 | 0.802 | - | - | 0.982 | - | - | Mlig455_014475 {REF} {Length: 2143} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=42.2]; FERM N-terminal domain [PF09379.12, score=38.6]; Prokaryotic RING finger family 4 [PF14447.8, score=23.1]} {Human: ENSG00000007944, MYLIP, myosin regulatory light chain interacting protein, [Score=209, Expect=1e-62]} {Mouse: ENSMUSG00000038175, Mylip, myosin regulatory light chain interacting protein, [Score=209, Expect=6e-63]} {Dmel: FBgn0260866, dnr1, defense repressor 1, [Score=78.6, Expect=2e-15]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_50804} {RNA1310_19058, RNA1509_50804} {RNA1509_50804, RNA815_23484} |
| 5. | MligTC455_21058 | 197 | 4.11 | Mlig455_012541 | Neo: Int S/G2/M Age: - |
PPAT | 1.712 | - | - | - | 0.951 | - | 0.761 | Mlig455_012541 {REF} {Length: 5957} {TRANSSPLICED} {Pfam: Glutamine amidotransferase domain [PF13522.8, score=52.7]; Glutamine amidotransferase domain [PF13537.8, score=48.5]; Ring finger domain [PF13639.8, score=39.7]; 3' exoribonuclease family, domain 2 [PF03725.17, score=32.3]; 3' exoribonuclease family, domain 1 [PF01138.23, score=31.9]; RING-H2 zinc finger domain [PF12678.9, score=26.5]; Phosphoribosyl transferase domain [PF00156.29, score=26.4]; RING-type zinc-finger [PF13445.8, score=25.8]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.2]; Glutamine amidotransferases class-II [PF13230.8, score=20.4]; Domain of unknown function (DUF4620) [PF15399.8, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.2]} {Human: ENSG00000128059, PPAT, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=530, Expect=3e-173]} {Mouse: ENSMUSG00000029246, Ppat, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=529, Expect=3e-173]} {Dmel: FBgn0041194, Prat2, Phosphoribosylamidotransferase 2, [RH, Score=505, Expect=5e-164]} {Celegans: WBGene00011407, ppat-1, Amidophosphoribosyltransferase, [RH, Score=399, Expect=2e-125]} {Smed: dd_Smed_v6_10667_0_1, dd_Smed_v6_10667_0_1, [RH, Score=512, Expect=2e-167]} {RNA1509_41149} {RNA1310_4226.1} {RNA815_5739} |
| 6. | MligTC455_41228 | 892 | 18.59 | Mlig455_029646 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.317 Region-enriched R5: 1.550/0.00080 |
SAFB | 1.687 | 0.736 | - | - | - | - | 0.951 | Mlig455_029646 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000071054, Safb, scaffold attachment factor B, [Score=61.6, Expect=2e-09]} {RNA1509_11846, RNA1509_41823} {RNA1310_8499, RNA1509_11846, RNA1509_41823} {RNA1509_11846, RNA1509_41823, RNA815_6853} |
| 7. | MligTC455_26135 | 67 | 1.4 | Mlig455_009319 | Neo: - Age: - |
0.98 | - | - | - | 0.980 | - | - | Mlig455_009319 {REF} {Length: 1657} {RNA1310_28088} {RNA815_5881.1} | |
| 8. | MligTC455_08736 | 146 | 3.04 | Mlig455_041801 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.393/0.03544 |
0.978 | - | - | - | - | 0.978 | - | Mlig455_041801 {REF} {Length: 2295} {RNA1509_20698} {RNA1310_12115} {RNA815_7721} | |
| 9. | MligTC455_52418 | 120 | 2.49 | Mlig455_050438 | Neo: - Age: Up-Down-Down |
0.96 | - | - | - | - | - | 0.960 | Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655} | |
| 10. | MligTC455_42300 | 310 | 6.45 | Mlig455_003329 | Neo: - Age: - Region-enriched R5: 1.364/0.02236 |
GCNA | 0.955 | - | - | - | - | - | 0.955 | Mlig455_003329 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: SprT-like family [PF10263.11, score=86.7]; SprT-like zinc ribbon domain [PF17283.4, score=21.7]} {Human: ENSG00000147174, GCNA, germ cell nuclear acidic peptidase, [RH, Score=140, Expect=2e-34]} {Dmel: FBgn0023515, CG14814, [RH, Score=163, Expect=1e-41]} {Celegans: WBGene00022694, gcna-1, Germ Cell Nuclear Antigen, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_19176_0_2, dd_Smed_v6_19176_0_2, [RH, Score=167, Expect=2e-44]} {RNA1509_15952} {RNA1310_6594} {RNA815_2049} |
| 11. | MligTC455_23354 | 985 | 20.51 | Mlig455_043725, Mlig455_043812 | Neo: - Age: - |
GEMIN5 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_043725 {REF} {Length: 4629} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=53.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.1]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=263, Expect=6e-71]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=271, Expect=9e-74]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.5, Expect=6e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=56.6, Expect=6e-08]} {RNA1509_10687} {RNA1310_1434.2} {RNA815_13032} Mlig455_043812 {REF} {Length: 4661} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=281, Expect=1e-76]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=289, Expect=3e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=60.8, Expect=7e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=58.5, Expect=2e-08]} {RNA1509_10687, RNA1509_30279} {RNA1310_1434.2, RNA1509_30279} {RNA1509_30279, RNA815_13032} |
| 12. | MligTC455_35622 | 33 | 0.68 | Mlig455_004639 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_004639 {REF} {Length: 1531} {NoTransDecoderORF} {RNA1509_15717} {RNA1310_20201} {RNA815_28756} |
Berezikov Lab - 2020-2021 © ERIBA