Data search


search
Exact
Search

Results for MligTC455_51794

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51794 7 0.14 Mlig455_069725

Neo: -

Age: -

Mlig455_069725 {REF} {Length: 787} {NoTransDecoderORF} {RNA1509_48977} {RNA1310_77518} {RNA815_45587}

Cumulative graph for MligTC455_51794

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_51794

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51794 7 0.14 Mlig455_069725

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_069725 {REF} {Length: 787} {NoTransDecoderORF} {RNA1509_48977} {RNA1310_77518} {RNA815_45587}
2. MligTC455_11954 21 0.43 Mlig455_056770

Neo: -

Age: -

LHX6 0.99 - - 0.990 - - - Mlig455_056770 {REF} {Length: 1956} {Pfam: Homeodomain [PF00046.31, score=63.1]; LIM domain [PF00412.24, score=52.0]} {Human: ENSG00000106852, LHX6, LIM homeobox 6, [Score=135, Expect=1e-35]; ENSG00000162624, LHX8, LIM homeobox 8, [Score=129, Expect=3e-33]} {Mouse: ENSMUSG00000026890, Lhx6, LIM homeobox protein 6, [Score=137, Expect=5e-36]} {Dmel: FBgn0013751, Awh, Arrowhead, [RH, Score=157, Expect=6e-45]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [RH, Score=159, Expect=1e-44]} {Smed: dd_Smed_v6_47123_0_1, dd_Smed_v6_47123_0_1, [RH, Score=222, Expect=1e-68]}
3. MligTC455_33976 14 0.29 Mlig455_046330, Mlig455_047555, Mlig455_069685

Neo: -

Age: -

0.978 - - 0.978 - - -

Mlig455_046330 {REF} {Length: 210} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [Score=69.3, Expect=2e-15]} {RNA1509_43825} {RNA1310_55270} {RNA815_45398}

Mlig455_047555 {REF} {Length: 1917} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=54.7]} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [RH, Score=227, Expect=7e-69]} {RNA1509_43825} {RNA1310_55270, RNA1509_43825} {RNA1509_43825, RNA815_45398}

Mlig455_069685 {REF} {Length: 1553} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=50.9]} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [RH, Score=223, Expect=3e-67]} {RNA1509_43825} {RNA1310_55270} {RNA815_45398}
4. MligTC455_43880 107 2.24 Mlig455_034314

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.962

MFSD11 0.96 - - 0.960 - - - Mlig455_034314 {REF} {Length: 3517} {Pfam: Ion channel regulatory protein UNC-93 [PF05978.18, score=154.5]} {Human: ENSG00000092931, MFSD11, major facilitator superfamily domain containing 11, [Score=247, Expect=2e-77]} {Mouse: ENSMUSG00000020818, Mfsd11, major facilitator superfamily domain containing 11, [Score=247, Expect=1e-77]} {Dmel: FBgn0038053, CG18549, [Score=198, Expect=5e-59]} {Celegans: WBGene00017945, F31D5.2, [Score=152, Expect=8e-42]} {Smed: dd_Smed_v6_6305_0_1, dd_Smed_v6_6305_0_1, [Score=206, Expect=4e-62]} {RNA1509_23938} {RNA1310_10975.1} {RNA815_5713}
5. MligTC455_36838 55 1.15 Mlig455_023457

Neo: -

Age: -

SSTR4 0.957 - - 0.957 - - - Mlig455_023457 {REF} {Length: 5737} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=97.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=60.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000031489, Adrb3, adrenergic receptor, beta 3, [Score=53.1, Expect=3e-07]; ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=52.0, Expect=9e-07]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [RH, Score=154, Expect=9e-42]} {Celegans: WBGene00009629, sprr-2, Sex Peptide Receptor (Drosophila) Related, [RH, Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_14444_0_1, dd_Smed_v6_14444_0_1, [RH, Score=192, Expect=3e-56]} {RNA1310_22470} {RNA815_32139}
6. MligTC455_26471 119 2.47 Mlig455_050266

Neo: Neoblast, stringent

Age: Up-Down-Down

PUM3 0.955 - - 0.955 - - - Mlig455_050266 {REF} {Length: 4249} {TRANSSPLICED} {Pfam: CPL (NUC119) domain [PF08144.13, score=55.2]; Pumilio-family RNA binding repeat [PF00806.21, score=24.5]} {Human: ENSG00000080608, PUM3, pumilio RNA binding family member 3, [RH, Score=210, Expect=4e-58]} {Mouse: ENSMUSG00000041360, Pum3, pumilio RNA-binding family member 3, [RH, Score=217, Expect=9e-61]} {Dmel: FBgn0015527, peng, penguin, [RH, Score=127, Expect=4e-30]} {Celegans: WBGene00014165, puf-12, Pumilio domain-containing protein 12, [RH, Score=204, Expect=2e-55]} {Smed: dd_Smed_v6_7389_0_1, dd_Smed_v6_7389_0_1, [RH, Score=221, Expect=7e-63]} {RNA1509_8112} {RNA1310_6869.1} {RNA815_1829.1}
7. MligTC455_42559 17 0.36 Mlig455_064128

Neo: -

Age: -

0.955 - - 0.955 - - - Mlig455_064128 {REF} {Length: 1837} {Pfam: Glycine rich protein [PF12810.9, score=23.2]} {RNA1310_112308} {RNA815_32418}
8. MligTC455_36450 63 1.32 Mlig455_019216

Neo: -

Age: Down-Up-Down

0.953 - - 0.953 - - - Mlig455_019216 {REF} {Length: 972} {RNA1509_36471} {RNA1310_4381} {RNA815_59293}
9. MligTC455_36959 14 0.28 Mlig455_019348, Mlig455_019567, Mlig455_045238

Neo: -

Age: -

AC243734.1 0.95 - - 0.950 - - -

Mlig455_019348 {REF} {Length: 1134}

Mlig455_019567 {REF} {Length: 1135}

Mlig455_045238 {REF} {Length: 1757} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=170.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.4]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=1e-73]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=1e-73]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=243, Expect=5e-73]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=233, Expect=3e-69]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=244, Expect=1e-73]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=235, Expect=2e-70]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=252, Expect=5e-76]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=234, Expect=1e-69]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=242, Expect=2e-72]} {RNA1310_104931} {RNA815_34654}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA