Data search


search
Exact
Search

Results for MligTC455_51856

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51856 15 0.30 Mlig455_041045

Neo: -

Age: -

Mlig455_041045 {REF} {Length: 1607} {NoTransDecoderORF} {RNA1310_68361} {RNA815_51930}

Cumulative graph for MligTC455_51856

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_51856

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51856 15 0.3 Mlig455_041045

Neo: -

Age: -

1 - - - - - 1.000 Mlig455_041045 {REF} {Length: 1607} {NoTransDecoderORF} {RNA1310_68361} {RNA815_51930}
2. MligTC455_46831 32 0.66 Mlig455_000140

Neo: -

Age: -

0.998 - - - - - 0.998 Mlig455_000140 {REF} {Length: 1100}
3. MligTC455_19679 66 1.38 Mlig455_028164

Neo: -

Age: -

Region-enriched R2: 5.194/0.00256

SLC7A11 0.992 - - - - - 0.992 Mlig455_028164 {REF} {Length: 3562} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=187.6]; Amino acid permease [PF00324.23, score=95.8]} {Human: ENSG00000151012, SLC7A11, solute carrier family 7 member 11, [RH, Score=350, Expect=1e-115]} {Mouse: ENSMUSG00000027737, Slc7a11, solute carrier family 7 (cationic amino acid transporter, y+ system), member 11, [Score=370, Expect=2e-123]} {Dmel: FBgn0002778, mnd, minidiscs, [RH, Score=379, Expect=5e-127]} {Celegans: WBGene00000004, aat-3, Amino Acid Transporter, [Score=331, Expect=2e-108]} {Smed: dd_Smed_v6_4211_0_1, dd_Smed_v6_4211_0_1, [Score=465, Expect=3e-160]} {RNA1310_31710.1} {RNA815_14153}
4. MligTC455_44316 38 0.8 Mlig455_014665

Neo: -

Age: -

CALM2 0.989 - - - - - 0.989 Mlig455_014665 {REF} {Length: 2169} {Pfam: EF hand [PF00036.34, score=106.1]; EF-hand domain pair [PF13499.8, score=99.6]; EF hand [PF13202.8, score=88.6]; EF-hand domain [PF13405.8, score=80.4]; EF-hand domain pair [PF13833.8, score=74.3]; EF-hand domain [PF14658.8, score=34.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.7]; Dockerin type I domain [PF00404.20, score=20.7]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=90.1, Expect=1e-22]; ENSG00000198668, CALM1, calmodulin 1, [Score=89.4, Expect=7e-23]; ENSG00000160014, CALM3, calmodulin 3, [Score=89.4, Expect=7e-23]; ENSG00000178363, CALML3, calmodulin like 3, [Score=89.0, Expect=1e-22]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=94.7, Expect=5e-25]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=90.5, Expect=1e-23]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=89.7, Expect=2e-23]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=89.7, Expect=2e-23]} {RNA1310_43007} {RNA815_46660}
5. MligTC455_13813 22 0.45 Mlig455_013816

Neo: -

Age: -

0.987 - - - - - 0.987 Mlig455_013816 {REF} {Length: 2884} {Pfam: Glycine rich protein [PF12810.9, score=45.1]} {RNA1310_61234} {RNA815_39176}
6. MligTC455_16607 52 1.08 Mlig455_010045

Neo: -

Age: Down-Up-Up

0.986 - - - - - 0.986 Mlig455_010045 {REF} {Length: 2283} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [Score=71.6, Expect=9e-15]} {RNA1310_14473.1} {RNA815_57194}
7. MligTC455_19850 21 0.44 Mlig455_016817

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.038

GUCY1B1 0.984 - - - - - 0.984 Mlig455_016817 {REF} {Length: 2782} {Pfam: Heme NO binding associated [PF07701.16, score=218.0]; Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=199.9]; Haem-NO-binding [PF07700.17, score=175.1]} {Human: ENSG00000061918, GUCY1B1, guanylate cyclase 1 soluble subunit beta 1, [Score=338, Expect=4e-107]} {Mouse: ENSMUSG00000028005, Gucy1b1, guanylate cyclase 1, soluble, beta 1, [Score=342, Expect=6e-109]; ENSMUSG00000021933, Gucy1b2, guanylate cyclase 1, soluble, beta 2, [Score=339, Expect=1e-105]} {Dmel: FBgn0038295, Gyc88E, Guanylyl cyclase at 88E, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00001551, gcy-31, Soluble guanylate cyclase gcy-31, [RH, Score=513, Expect=2e-174]} {Smed: dd_Smed_v6_18111_0_1, dd_Smed_v6_18111_0_1, [RH, Score=823, Expect=0.0]} {RNA1509_55074} {RNA1310_24262} {RNA815_41754}
8. MligTC455_49211 30 0.63 Mlig455_044533

Neo: -

Age: -

0.984 - - - - - 0.984 Mlig455_044533 {REF} {Length: 2489} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=139.7]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=62.0, Expect=5e-10]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=51.6, Expect=1e-07]} {RNA1509_50956} {RNA1310_27155} {RNA815_39321}
9. MligTC455_24523 144 2.99 Mlig455_010636, Mlig455_010724

Neo: -

Age: -

Region-enriched R2: 9.355/0.00000

RGS6 0.981 - - - - - 0.981

Mlig455_010636 {REF} {Length: 2512} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=118.4]; Regulator of G protein signaling domain [PF00615.21, score=116.4]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=31.3]} {Human: ENSG00000182732, RGS6, regulator of G protein signaling 6, [Score=301, Expect=3e-95]} {Mouse: ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [Score=299, Expect=2e-94]; ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [Score=290, Expect=6e-91]} {Dmel: FBgn0259927, CG42450, [RH, Score=327, Expect=2e-98]} {Celegans: WBGene00001145, eat-16, [Score=217, Expect=1e-63]} {Smed: dd_Smed_v6_5311_0_1, dd_Smed_v6_5311_0_1, [RH, Score=384, Expect=1e-127]} {RNA1509_59108} {RNA1310_13711, RNA1509_59108} {RNA1509_59108, RNA815_9935}

Mlig455_010724 {REF} {Length: 2512} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=118.4]; Regulator of G protein signaling domain [PF00615.21, score=113.1]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=31.3]} {Human: ENSG00000182732, RGS6, regulator of G protein signaling 6, [Score=299, Expect=2e-94]} {Mouse: ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [Score=297, Expect=2e-93]; ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [Score=287, Expect=4e-90]} {Dmel: FBgn0259927, CG42450, [RH, Score=324, Expect=1e-97]} {Celegans: WBGene00001145, eat-16, [Score=214, Expect=8e-63]} {Smed: dd_Smed_v6_5311_0_1, dd_Smed_v6_5311_0_1, [RH, Score=382, Expect=8e-127]} {RNA1509_59108} {RNA1310_13711} {RNA815_9935}
10. MligTC455_26283 32 0.66 Mlig455_017872

Neo: -

Age: -

0.98 - - - - - 0.980 Mlig455_017872 {REF} {Length: 2794} {RNA1509_998} {RNA1310_87.2} {RNA815_3880}
11. MligTC455_46429 48 1 Mlig455_042128

Neo: -

Age: -

0.978 - - - - - 0.978 Mlig455_042128 {REF} {Length: 1428} {Pfam: F5/8 type C domain [PF00754.27, score=33.1]} {RNA1310_65361} {RNA815_33677}
12. MligTC455_40290 58 1.21 Mlig455_058728

Neo: -

Age: -

Region-enriched R2: 4.464/0.00807
Region-enriched R7: 3.833/0.03206

0.977 - - - - - 0.977 Mlig455_058728 {REF} {Length: 1351} {Pfam: CUB domain [PF00431.22, score=48.4]} {RNA1310_48745} {RNA815_23305}
13. MligTC455_38279 69 1.44 Mlig455_045200

Neo: -

Age: -

NOL4L 0.976 - - - - - 0.976 Mlig455_045200 {REF} {Length: 1997} {Human: ENSG00000197183, NOL4L, nucleolar protein 4 like, [RH, Score=150, Expect=9e-40]} {Mouse: ENSMUSG00000061411, Nol4l, nucleolar protein 4-like, [RH, Score=150, Expect=1e-39]} {Dmel: FBgn0283651, CG46301, [RH, Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_27580_0_1, dd_Smed_v6_27580_0_1, [RH, Score=85.5, Expect=1e-17]} {RNA1310_76365.1} {RNA815_48196}
14. MligTC455_47808 151 3.15 Mlig455_066806

Neo: -

Age: -

STAC2 0.976 - - - - - 0.976 Mlig455_066806 {REF} {Length: 4661} {Pfam: SH3 domain [PF00018.30, score=41.7]; Variant SH3 domain [PF14604.8, score=35.5]} {Human: ENSG00000141750, STAC2, SH3 and cysteine rich domain 2, [RH, Score=72.8, Expect=1e-12]} {Mouse: ENSMUSG00000017400, Stac2, SH3 and cysteine rich domain 2, [RH, Score=72.0, Expect=2e-12]} {Dmel: FBgn0263980, CG43729, [RH, Score=149, Expect=5e-36]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [Score=53.9, Expect=2e-08]} {Smed: dd_Smed_v6_14652_0_1, dd_Smed_v6_14652_0_1, [Score=172, Expect=1e-43]} {RNA1509_54523} {RNA1310_1618} {RNA815_6997}
15. MligTC455_40289 93 1.94 Mlig455_017727, Mlig455_056175

Neo: -

Age: -

BMP1, CUBN 0.973 - - - - - 0.973

Mlig455_017727 {REF} {Length: 1202} {Pfam: CUB domain [PF00431.22, score=55.3]} {Human: ENSG00000107611, CUBN, cubilin, [Score=54.7, Expect=4e-08]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=52.0, Expect=3e-07]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=51.6, Expect=3e-07]; ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=49.7, Expect=1e-06]} {Dmel: FBgn0003719, tld, tolloid, [Score=51.2, Expect=3e-07]} {Smed: dd_Smed_v6_69474_0_1, dd_Smed_v6_69474_0_1, [Score=47.4, Expect=2e-07]} {RNA1310_48745} {RNA815_23305}

Mlig455_056175 {REF} {Length: 2747} {Pfam: CUB domain [PF00431.22, score=62.6]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=52.8, Expect=2e-07]; ENSG00000107611, CUBN, cubilin, [Score=51.6, Expect=4e-07]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=51.6, Expect=3e-07]; ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=49.7, Expect=1e-06]} {Dmel: FBgn0003719, tld, tolloid, [Score=51.2, Expect=3e-07]} {Smed: dd_Smed_v6_69474_0_1, dd_Smed_v6_69474_0_1, [Score=47.0, Expect=3e-07]} {RNA1310_48745} {RNA815_23305}
16. MligTC455_44327 94 1.95 Mlig455_026126

Neo: -

Age: Down-Down-Down

Region-enriched R5: 3.905/0.02515

0.973 - - - - - 0.973 Mlig455_026126 {REF} {Length: 572} {RNA1509_32102} {RNA1310_60068} {RNA815_37486}
17. MligTC455_18011 38 0.8 Mlig455_066318

Neo: -

Age: -

SLC35F4 0.972 - - - - - 0.972 Mlig455_066318 {REF} {Length: 2334} {Human: ENSG00000151812, SLC35F4, solute carrier family 35 member F4, [RH, Score=80.1, Expect=2e-15]} {Mouse: ENSMUSG00000021852, Slc35f4, solute carrier family 35, member F4, [RH, Score=80.9, Expect=8e-16]} {Dmel: FBgn0259222, CG42322, [Score=117, Expect=2e-27]} {Smed: dd_Smed_v6_18554_0_1, dd_Smed_v6_18554_0_1, [RH, Score=94.4, Expect=8e-22]} {RNA1310_93042} {RNA815_44166}
18. MligTC455_47877 27 0.57 Mlig455_016941

Neo: -

Age: -

TRAF4 0.97 - - - - - 0.970 Mlig455_016941 {REF} {Length: 5966} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=84.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.0]; Seven in absentia protein family [PF03145.18, score=21.6]; Ring finger domain [PF13639.8, score=19.3]; zf-RING of BARD1-type protein [PF14835.8, score=19.3]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [RH, Score=240, Expect=1e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [RH, Score=244, Expect=2e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [RH, Score=172, Expect=2e-47]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=262, Expect=1e-81]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=573, Expect=0.0]} {RNA1310_10917} {RNA815_7389}
19. MligTC455_29152 33 0.68 Mlig455_018706

Neo: -

Age: -

0.968 - - - - - 0.968 Mlig455_018706 {REF} {Length: 1786} {RNA1509_38365} {RNA1310_54025} {RNA815_28950}
20. MligTC455_19410 194 4.04 Mlig455_047838

Neo: -

Age: Down-Up-Up

Region-specific R2: 5.170

Region-enriched R2: 5.689/0.00000

0.967 - - - - - 0.967 Mlig455_047838 {REF} {Length: 724} {TRANSSPLICED} {RNA1509_54915} {RNA1310_53549} {RNA815_27051}
21. MligTC455_29157 30 0.63 Mlig455_018723

Neo: -

Age: -

0.967 - - - - - 0.967 Mlig455_018723 {REF} {Length: 504} {RNA1509_38365} {RNA1310_117516} {RNA815_19813}
22. MligTC455_20220 62 1.28 Mlig455_009719

Neo: -

Age: Up-Down-Down

0.966 - - - - - 0.966 Mlig455_009719 {REF} {Length: 1941} {RNA1509_17322} {RNA1310_627.1, RNA1509_17322} {RNA1509_17322, RNA815_7468}
23. MligTC455_52393 60 1.25 Mlig455_039640

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.560

Region-enriched R2: 5.399/0.01138

CHAT 0.964 - - - - - 0.964 Mlig455_039640 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=546.9]} {Human: ENSG00000070748, CHAT, choline O-acetyltransferase, [RH, Score=520, Expect=1e-176]} {Mouse: ENSMUSG00000021919, Chat, choline acetyltransferase, [RH, Score=521, Expect=3e-177]} {Dmel: FBgn0000303, ChAT, Choline acetyltransferase, [Score=452, Expect=1e-149]} {Celegans: WBGene00000481, cha-1, Choline O-acetyltransferase, [RH, Score=356, Expect=1e-113]} {Smed: dd_Smed_v6_6208_0_1, dd_Smed_v6_6208_0_1, [Score=535, Expect=0.0]} {RNA1509_40088} {RNA1310_20833} {RNA815_26395}
24. MligTC455_44308 40 0.82 Mlig455_006155

Neo: -

Age: -

Region-enriched R2: 5.931/0.03949
Region-enriched R5: 4.482/0.01958

0.962 - - - - - 0.962 Mlig455_006155 {REF} {Length: 1184} {Pfam: F5/8 type C domain [PF00754.27, score=25.5]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=47.8, Expect=4e-07]} {RNA1509_2129} {RNA1310_49415} {RNA815_42540}
25. MligTC455_15344 63 1.3 Mlig455_037163, Mlig455_052315

Neo: -

Age: -

FEV 0.961 - - - - - 0.961

Mlig455_037163 {REF} {Length: 2044} {Pfam: Ets-domain [PF00178.24, score=118.9]} {Human: ENSG00000163497, FEV, FEV, ETS transcription factor, [RH, Score=186, Expect=7e-58]} {Mouse: ENSMUSG00000055197, Fev, FEV (ETS oncogene family), [RH, Score=187, Expect=4e-58]} {Dmel: FBgn0005658, Ets65A, Ets at 65A, [Score=206, Expect=2e-65]} {Celegans: WBGene00020368, ast-1, Axon STeering defect, [RH, Score=196, Expect=2e-60]} {Smed: dd_Smed_v6_11113_0_1, dd_Smed_v6_11113_0_1, [Score=226, Expect=3e-72]} {RNA1509_29423} {RNA1310_30786.1} {RNA815_45406}

Mlig455_052315 {REF} {Length: 2061} {Pfam: Ets-domain [PF00178.24, score=118.7]; Protein of unknown function (DUF2722) [PF10846.10, score=18.2]} {Human: ENSG00000163497, FEV, FEV, ETS transcription factor, [RH, Score=186, Expect=2e-57]} {Mouse: ENSMUSG00000055197, Fev, FEV (ETS oncogene family), [RH, Score=186, Expect=1e-57]} {Dmel: FBgn0005658, Ets65A, Ets at 65A, [Score=207, Expect=2e-65]} {Celegans: WBGene00020368, ast-1, Axon STeering defect, [RH, Score=196, Expect=4e-60]} {Smed: dd_Smed_v6_14611_0_1, dd_Smed_v6_14611_0_1, [RH, Score=211, Expect=7e-65]} {RNA1509_29423} {RNA1310_30786.1} {RNA815_45406}
26. MligTC455_41106 42 0.88 Mlig455_010275

Neo: -

Age: -

Region-enriched R2: 5.386/0.03242

CALM1 0.958 - - - - - 0.958 Mlig455_010275 {REF} {Length: 1557} {Pfam: EF hand [PF00036.34, score=32.5]; EF-hand domain pair [PF13499.8, score=30.4]; EF-hand domain [PF13405.8, score=29.3]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=67.0, Expect=4e-14]; ENSG00000160014, CALM3, calmodulin 3, [Score=67.0, Expect=4e-14]; ENSG00000143933, CALM2, calmodulin 2, [Score=67.0, Expect=4e-14]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=67.0, Expect=3e-14]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=67.0, Expect=3e-14]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=67.0, Expect=3e-14]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=63.9, Expect=5e-13]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=66.2, Expect=4e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=66.6, Expect=3e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=66.6, Expect=2e-14]} {RNA1310_51265}
27. MligTC455_40352 49 1.03 Mlig455_024410

Neo: -

Age: -

0.956 - - - - - 0.956 Mlig455_024410 {REF} {Length: 1509} {TRANSSPLICED} {RNA1310_29008} {RNA815_41596}
28. MligTC455_43581 177 3.68 Mlig455_042725, Mlig455_042827, Mlig455_063146

Neo: -

Age: Up-Down-Down

GRIA2 0.956 - - - - - 0.956

Mlig455_042725 {REF} {Length: 3074} {Pfam: Ligand-gated ion channel [PF00060.28, score=104.7]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=44.7]; Receptor family ligand binding region [PF01094.30, score=33.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.7]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=153, Expect=1e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=149, Expect=2e-36]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=147, Expect=7e-36]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=152, Expect=2e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=148, Expect=3e-36]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=147, Expect=8e-36]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=145, Expect=2e-35]} {Dmel: FBgn0038837, CG3822, [Score=140, Expect=5e-34]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=126, Expect=1e-29]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=253, Expect=2e-76]} {RNA1310_25150} {RNA815_13942}

Mlig455_042827 {REF} {Length: 2869} {Pfam: Ligand-gated ion channel [PF00060.28, score=83.9]; Receptor family ligand binding region [PF01094.30, score=49.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=44.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=20.3]; Iron-containing alcohol dehydrogenase [PF13685.8, score=18.6]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=125, Expect=6e-29]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=122, Expect=5e-28]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=121, Expect=7e-28]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=125, Expect=5e-29]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=122, Expect=4e-28]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=121, Expect=1e-27]; ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=120, Expect=1e-27]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=119, Expect=3e-27]} {Dmel: FBgn0039927, CG11155, [Score=127, Expect=7e-30]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=217, Expect=2e-63]} {RNA1310_25150} {RNA815_13942}

Mlig455_063146 {REF} {Length: 2444} {Pfam: Receptor family ligand binding region [PF01094.30, score=35.8]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=82.4, Expect=1e-16]} {RNA1310_25150} {RNA815_13999}
29. MligTC455_13068 13 0.27 Mlig455_021784

Neo: -

Age: -

0.955 - - - - - 0.955 Mlig455_021784 {REF} {Length: 905} {NoTransDecoderORF} {RNA1310_100071}
30. MligTC455_38682 102 2.12 Mlig455_039641

Neo: -

Age: -

Region-enriched R2: 6.138/0.02363

SLC18A3 0.955 - - - - - 0.955 Mlig455_039641 {REF} {Length: 3925} {Pfam: Major Facilitator Superfamily [PF07690.18, score=147.1]; Sugar (and other) transporter [PF00083.26, score=29.0]; LacY proton/sugar symporter [PF01306.21, score=20.2]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [RH, Score=469, Expect=9e-161]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [RH, Score=469, Expect=1e-160]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [RH, Score=513, Expect=2e-177]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [RH, Score=486, Expect=2e-167]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [RH, Score=563, Expect=0.0]} {RNA1310_28397} {RNA815_32284.1}
31. MligTC455_34655 89 1.86 Mlig455_058020, Mlig455_058176

Neo: -

Age: -

Region-enriched R2: 5.798/0.00826

PPEF1 0.954 - - - - - 0.954

Mlig455_058020 {REF} {Length: 3007} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=84.9]; EF-hand domain pair [PF13499.8, score=77.8]; EF hand [PF00036.34, score=66.0]; EF-hand domain pair [PF13833.8, score=52.1]; EF-hand domain [PF13405.8, score=48.4]; EF hand [PF13202.8, score=38.2]; PPP5 TPR repeat region [PF08321.14, score=37.0]; EF-hand domain [PF14658.8, score=23.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.4]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [Score=416, Expect=2e-138]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=413, Expect=9e-138]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=404, Expect=3e-134]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=455, Expect=2e-155]} {Smed: dd_Smed_v6_11874_0_2, dd_Smed_v6_11874_0_2, [Score=516, Expect=2e-178]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}

Mlig455_058176 {REF} {Length: 3371} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=102.6]; EF-hand domain pair [PF13499.8, score=72.6]; EF hand [PF00036.34, score=64.2]; EF-hand domain pair [PF13833.8, score=51.3]; EF-hand domain [PF13405.8, score=46.1]; EF hand [PF13202.8, score=36.7]; PPP5 TPR repeat region [PF08321.14, score=36.6]; EF-hand domain [PF14658.8, score=26.5]; IQ calmodulin-binding motif [PF00612.29, score=21.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=546, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=520, Expect=3e-177]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=529, Expect=2e-180]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=598, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=671, Expect=0.0]} {RNA1509_3508} {RNA1310_10928.2} {RNA815_11707}
32. MligTC455_49557 280 5.82 Mlig455_017273

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.728

Region-specific R2: 3.642

Region-enriched R2: 3.187/0.00196

0.954 - - - - - 0.954 Mlig455_017273 {REF} {Length: 1333} {RNA1509_52848} {RNA1310_64923, RNA1509_52848} {RNA1509_52848, RNA815_51063}
33. MligTC455_07439 17 0.36 Mlig455_056539

Neo: -

Age: -

THAP12 0.952 - - - - - 0.952 Mlig455_056539 {REF} {Length: 2824} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=97.0]; Protein of unknown function (DUF 659) [PF04937.17, score=19.0]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=135, Expect=3e-33]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_27814_0_2, dd_Smed_v6_27814_0_2, [Score=113, Expect=2e-28]} {RNA1310_98157} {RNA815_50753}
34. MligTC455_53349 48 1 Mlig455_034044, Mlig455_060425

Neo: -

Age: -

Region-enriched R8: 4.743/0.03399

0.952 - - - - - 0.952

Mlig455_034044 {REF} {Length: 117} {NoTransDecoderORF} {RNA1310_129264}

Mlig455_060425 {REF} {Length: 180} {NoTransDecoderORF} {RNA1310_129264}
35. MligTC455_32234 17 0.36 Mlig455_005702

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_005702 {REF} {Length: 810} {NoTransDecoderORF} {RNA1509_34199} {RNA1310_27268} {RNA815_5538}
36. MligTC455_51154 45 0.94 Mlig455_045899

Neo: -

Age: -

CPED1 0.95 - - - - - 0.950 Mlig455_045899 {REF} {Length: 3530} {Human: ENSG00000106034, CPED1, cadherin like and PC-esterase domain containing 1, [RH, Score=178, Expect=2e-47]} {Mouse: ENSMUSG00000062980, Cped1, cadherin-like and PC-esterase domain containing 1, [RH, Score=179, Expect=6e-48]} {Smed: dd_Smed_v6_14757_0_1, dd_Smed_v6_14757_0_1, [RH, Score=188, Expect=3e-53]} {RNA1509_12903} {RNA1310_19899.1} {RNA815_44464}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA