TomoSeq data search

Data search

Results for MligTC455_51940

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51940	294	6.12	Mlig455_021853, Mlig455_022022	Neo: - Age: -	TOX4	Mlig455_021853 {REF} {Length: 2206} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1} {RNA815_3695.1} Mlig455_022022 {REF} {Length: 2326} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1, RNA1509_13216} {RNA1509_13216, RNA815_3695.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51940

294

6.12

Mlig455_021853, Mlig455_022022

Neo: -

Age: -

TOX4

Mlig455_021853 {REF} {Length: 2206} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1} {RNA815_3695.1}

Mlig455_022022 {REF} {Length: 2326} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1, RNA1509_13216} {RNA1509_13216, RNA815_3695.1}

Cumulative graph for MligTC455_51940

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.198	3.148	0.15641	0.77495
RegionR2	1.446	3.148	0.26793	0.65094
RegionR3	0.369	3.148	0.70576	1.00000
RegionR4	0.06	3.148	0.83644	1.00000
RegionR5	1.402	3.148	0.13346	0.37267
RegionR6	0.858	3.148	0.44832	1.00000
RegionR7	0.627	3.148	0.61351	1.00000
RegionR8	1.436	3.148	0.31809	0.95124

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.302	3.148	0.99997	1.00000
RegenerationR2	1.749	3.148	0.02369	0.25266
RegenerationR3	1.858	3.148	0.05120	0.39218
RegenerationR4	1.181	3.148	0.20074	0.64695
RegenerationR5	0.654	3.148	0.42026	0.81157
RegenerationR6	1.419	3.148	0.11403	0.41595
RegenerationBL	0.653	3.148	0.48458	0.84998
RegenerationTP	0.832	3.148	0.43040	0.85299

Genes with expression patterns similar to MligTC455_51940

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51940	294	6.12	Mlig455_021853, Mlig455_022022	Neo: - Age: -	TOX4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021853 {REF} {Length: 2206} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1} {RNA815_3695.1} Mlig455_022022 {REF} {Length: 2326} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.7]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=20.8]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216} {RNA1310_11409.1, RNA1509_13216} {RNA1509_13216, RNA815_3695.1}
2.	MligTC455_43956	275	5.74	Mlig455_037223	Neo: Irradiation Age: logFC(26M/2M)=0.464	OXA1L	0.969	0.969	-	-	-	-	-	Mlig455_037223 {REF} {Length: 1420} {Pfam: 60Kd inner membrane protein [PF02096.22, score=44.1]} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=96.3, Expect=2e-22]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=101, Expect=2e-24]} {Dmel: FBgn0027615, CG6404, [Score=91.3, Expect=9e-21]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=77.4, Expect=3e-16]} {Smed: dd_Smed_v6_6233_1_2, dd_Smed_v6_6233_1_2, [Score=74.3, Expect=3e-15]} {RNA1509_10268} {RNA1310_18722.1} {RNA815_10959}
3.	MligTC455_31193	110	2.29	Mlig455_055801	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_055801 {REF} {Length: 1730} {RNA1509_53053} {RNA1310_76106} {RNA815_54420}
4.	MligTC455_08245	567	11.81	Mlig455_063623	Neo: - Age: logFC(26M/2M)=-0.430	VAV1	0.958	-	-	-	0.958	-	-	Mlig455_063623 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=45.1]; SH2 domain [PF00017.26, score=37.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=30.6]; Calponin homology (CH) domain [PF00307.33, score=27.2]} {Human: ENSG00000141968, VAV1, vav guanine nucleotide exchange factor 1, [Score=73.9, Expect=4e-13]} {Mouse: ENSMUSG00000034116, Vav1, vav 1 oncogene, [Score=53.5, Expect=8e-07]; ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=65.9, Expect=4e-11]} {RNA1509_11075} {RNA1310_9537.1, RNA1509_11075} {RNA1509_11075, RNA815_3290}
5.	MligTC455_09366	315	6.57	Mlig455_004649	Neo: - Age: Down-Down-Up		0.958	-	-	-	0.958	-	-	Mlig455_004649 {REF} {Length: 2502} {Pfam: Ring finger domain [PF13639.8, score=34.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.5]; RING-type zinc-finger [PF13445.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]} {RNA1509_34007} {RNA1310_15024} {RNA815_7070}
6.	MligTC455_43403	347	7.22	Mlig455_015913, Mlig455_059672	Neo: - Age: Down-Up-Down		0.951	-	-	-	0.951	-	-	Mlig455_015913 {REF} {Length: 2147} {NoTransDecoderORF} {RNA1509_4496} {RNA1310_3148.1} {RNA815_3879} Mlig455_059672 {REF} {Length: 746} {NoTransDecoderORF} {RNA1509_42088, RNA1509_4496} {RNA1310_3148.1, RNA1509_42088} {RNA1509_42088, RNA815_3879}