Data search
Results for MligTC455_52019
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52019 | 8734 | 181.96 | Mlig455_020071, Mlig455_040874 | Neo: - Age: - |
COTL1 | Mlig455_020071 {REF} {Length: 2539} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=57.5]} {Human: ENSG00000103187, COTL1, coactosin like F-actin binding protein 1, [Score=98.6, Expect=2e-25]} {Mouse: ENSMUSG00000031827, Cotl1, coactosin-like 1 (Dictyostelium), [Score=96.7, Expect=5e-25]} {Dmel: FBgn0030955, CG6891, [Score=105, Expect=2e-28]} {Smed: dd_Smed_v6_63_0_1, dd_Smed_v6_63_0_1, [Score=94.4, Expect=4e-24]} {RNA1509_39410} {RNA1310_28066} {RNA815_15985} Mlig455_040874 {REF} {Length: 1036} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=56.8]} {Human: ENSG00000103187, COTL1, coactosin like F-actin binding protein 1, [Score=97.4, Expect=5e-26]} {Mouse: ENSMUSG00000031827, Cotl1, coactosin-like 1 (Dictyostelium), [Score=95.9, Expect=2e-25]} {Dmel: FBgn0030955, CG6891, [Score=102, Expect=3e-28]} {Smed: dd_Smed_v6_63_0_1, dd_Smed_v6_63_0_1, [Score=92.8, Expect=2e-24]} {RNA1509_18981, RNA1509_39939, RNA1509_48173, RNA1509_6793} {RNA1310_1685.1, RNA1509_18981, RNA1509_39939, RNA1509_48173} {RNA1509_18981, RNA1509_39939, RNA1509_48173, RNA815_8557} |
Cumulative graph for MligTC455_52019
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.5 | 7.545 | 0.01839 | 0.37804 | |
| RegionR2 | -1.159 | 7.545 | 0.03142 | 0.20088 | |
| RegionR3 | 0.857 | 7.545 | 0.04762 | 0.38200 | |
| RegionR4 | 1.283 | 7.545 | 0.00955 | 0.05900 | |
| RegionR5 | 0.878 | 7.545 | 0.04005 | 0.15962 | |
| RegionR6 | 0.919 | 7.545 | 0.03453 | 0.34500 | |
| RegionR7 | -0.386 | 7.545 | 0.41016 | 1.00000 | |
| RegionR8 | -0.891 | 7.545 | 0.10454 | 0.60378 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.713 | 7.545 | 0.30639 | 0.99987 | |
| RegenerationR2 | -0.504 | 7.545 | 0.39533 | 0.81189 | |
| RegenerationR3 | -0.801 | 7.545 | 0.17934 | 0.61526 | |
| RegenerationR4 | -0.528 | 7.545 | 0.38689 | 0.80553 | |
| RegenerationR5 | -0.632 | 7.545 | 0.28362 | 0.71205 | |
| RegenerationR6 | -0.84 | 7.545 | 0.15932 | 0.48712 | |
| RegenerationBL | -1.425 | 7.545 | 0.00970 | 0.09897 | |
| RegenerationTP | 0.259 | 7.545 | 0.63275 | 0.97928 |
Genes with expression patterns similar to MligTC455_52019
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52019 | 8734 | 181.96 | Mlig455_020071, Mlig455_040874 | Neo: - Age: - |
COTL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020071 {REF} {Length: 2539} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=57.5]} {Human: ENSG00000103187, COTL1, coactosin like F-actin binding protein 1, [Score=98.6, Expect=2e-25]} {Mouse: ENSMUSG00000031827, Cotl1, coactosin-like 1 (Dictyostelium), [Score=96.7, Expect=5e-25]} {Dmel: FBgn0030955, CG6891, [Score=105, Expect=2e-28]} {Smed: dd_Smed_v6_63_0_1, dd_Smed_v6_63_0_1, [Score=94.4, Expect=4e-24]} {RNA1509_39410} {RNA1310_28066} {RNA815_15985} Mlig455_040874 {REF} {Length: 1036} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=56.8]} {Human: ENSG00000103187, COTL1, coactosin like F-actin binding protein 1, [Score=97.4, Expect=5e-26]} {Mouse: ENSMUSG00000031827, Cotl1, coactosin-like 1 (Dictyostelium), [Score=95.9, Expect=2e-25]} {Dmel: FBgn0030955, CG6891, [Score=102, Expect=3e-28]} {Smed: dd_Smed_v6_63_0_1, dd_Smed_v6_63_0_1, [Score=92.8, Expect=2e-24]} {RNA1509_18981, RNA1509_39939, RNA1509_48173, RNA1509_6793} {RNA1310_1685.1, RNA1509_18981, RNA1509_39939, RNA1509_48173} {RNA1509_18981, RNA1509_39939, RNA1509_48173, RNA815_8557} |
| 2. | MligTC455_52020 | 2033 | 42.35 | Mlig455_066463 | Neo: - Age: - Region-enriched R3: 1.238/0.03405 |
COTL1 | 3.769 | 0.962 | 0.944 | - | 0.962 | 0.901 | - | Mlig455_066463 {REF} {Length: 3008} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=57.6]} {Human: ENSG00000103187, COTL1, coactosin like F-actin binding protein 1, [Score=98.6, Expect=1e-25]} {Mouse: ENSMUSG00000031827, Cotl1, coactosin-like 1 (Dictyostelium), [Score=96.7, Expect=5e-25]} {Dmel: FBgn0030955, CG6891, [Score=104, Expect=3e-28]} {Smed: dd_Smed_v6_63_0_1, dd_Smed_v6_63_0_1, [Score=94.0, Expect=5e-24]} {RNA1509_39410} {RNA1310_28066} {RNA815_8557} |
| 3. | MligTC455_19366 | 2365 | 49.28 | Mlig455_029830 | Neo: - Age: - Region-enriched R3: 1.992/0.00057 |
PANK3 | 2.576 | 0.730 | - | - | 0.892 | - | 0.954 | Mlig455_029830 {REF} {Length: 1495} {Pfam: Fumble [PF03630.16, score=108.9]} {Human: ENSG00000120137, PANK3, pantothenate kinase 3, [Score=57.0, Expect=2e-08]; ENSG00000152782, PANK1, pantothenate kinase 1, [Score=56.6, Expect=3e-08]; ENSG00000125779, PANK2, pantothenate kinase 2, [Score=55.1, Expect=5e-08]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=56.6, Expect=2e-08]; ENSMUSG00000033610, Pank1, pantothenate kinase 1, [Score=56.2, Expect=2e-08]; ENSMUSG00000037514, Pank2, pantothenate kinase 2, [Score=55.8, Expect=4e-08]} {Dmel: FBgn0011205, fbl, fumble, [Score=55.1, Expect=5e-08]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [RH, Score=227, Expect=2e-71]} {RNA1509_1801} {RNA1310_24657, RNA1509_1801} {RNA1509_1801, RNA815_10326} |
| 4. | MligTC455_39350 | 538 | 11.21 | Mlig455_023484 | Neo: - Age: Down-Up-Down Region-enriched R4: 3.492/0.00082 |
RAB8B | 1.839 | - | - | - | 0.860 | - | 0.979 | Mlig455_023484 {REF} {Length: 1074} {Pfam: Ras family [PF00071.24, score=174.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.8]; ADP-ribosylation factor family [PF00025.23, score=55.3]; 50S ribosome-binding GTPase [PF01926.25, score=32.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.5]; RsgA GTPase [PF03193.18, score=22.5]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=152, Expect=1e-45]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=146, Expect=1e-43]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=145, Expect=2e-43]; ENSG00000285641, AL358472.6, novel protein, [Score=145, Expect=2e-43]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=152, Expect=6e-46]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=149, Expect=1e-44]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=147, Expect=3e-44]; ENSMUSG00000020732, Rab37, RAB37, member RAS oncogene family, [Score=145, Expect=5e-43]} {Dmel: FBgn0262518, Rab8, [Score=147, Expect=5e-44]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=147, Expect=2e-44]} {Smed: dd_Smed_v6_9518_0_2, dd_Smed_v6_9518_0_2, [RH, Score=167, Expect=5e-52]} {RNA1509_19859, RNA1509_27459} {RNA1310_37116, RNA1509_27459} {RNA1509_27459, RNA815_17007} |
| 5. | MligTC455_18032 | 1924 | 40.08 | Mlig455_002153, Mlig455_002252, Mlig455_002296 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.657 Region-enriched R4: 1.857/0.00029 |
1.82 | - | - | - | 0.849 | - | 0.971 | Mlig455_002153 {REF} {Length: 4196} {Pfam: Tyrosine phosphatase family [PF13350.8, score=98.9]; Tyrosine phosphatase family [PF03162.15, score=20.4]} {Smed: dd_Smed_v6_6110_0_1, dd_Smed_v6_6110_0_1, [Score=82.4, Expect=1e-17]} {RNA1509_29961} {RNA1310_28149.1} {RNA815_13002} Mlig455_002252 {REF} {Length: 1500} {Pfam: Tyrosine phosphatase family [PF13350.8, score=98.9]; Tyrosine phosphatase family [PF03162.15, score=21.3]} {Smed: dd_Smed_v6_6110_0_2, dd_Smed_v6_6110_0_2, [Score=80.5, Expect=2e-17]} {RNA1509_29961} {RNA1310_28149.1} {RNA815_13002} Mlig455_002296 {REF} {Length: 1611} {Pfam: Tyrosine phosphatase family [PF13350.8, score=98.8]; Tyrosine phosphatase family [PF03162.15, score=21.3]} {Smed: dd_Smed_v6_6110_0_2, dd_Smed_v6_6110_0_2, [Score=81.3, Expect=1e-17]} {RNA1509_29961, RNA1509_38885} {RNA1310_28149.1, RNA1509_38885} {RNA1509_38885, RNA815_13002} |
|
| 6. | MligTC455_13418 | 424 | 8.82 | Mlig455_050768, Mlig455_050801 | Neo: - Age: logFC(26M/2M)=0.448 Region-enriched R4: 4.157/0.00006 |
1.8 | - | - | - | 0.832 | - | 0.968 | Mlig455_050768 {REF} {Length: 1713} {Smed: dd_Smed_v6_3107_0_1, dd_Smed_v6_3107_0_1, [Score=52.8, Expect=6e-08]} {RNA1310_20320} {RNA815_8931} Mlig455_050801 {REF} {Length: 1781} {RNA1310_20320} {RNA815_8931} |
|
| 7. | MligTC455_43692 | 1533 | 31.94 | Mlig455_010960 | Neo: Irradiation Age: - Region-specific R4: 4.173 Region-enriched R4: 2.690/0.00000 Regeneration-downregulated R4: -2.347 Regeneration-depleted R4: -2.347 |
ABCG4 | 1.781 | - | - | - | 0.827 | - | 0.954 | Mlig455_010960 {REF} {Length: 1261} {Pfam: ABC-2 type transporter [PF01061.26, score=140.7]} {Human: ENSG00000172350, ABCG4, ATP binding cassette subfamily G member 4, [Score=125, Expect=6e-31]} {Mouse: ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [Score=123, Expect=2e-30]} {Dmel: FBgn0003996, w, white, [Score=273, Expect=2e-85]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=219, Expect=6e-66]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [RH, Score=266, Expect=8e-83]} {RNA1509_6339, RNA1509_6662} {RNA1310_1122.2, RNA1509_6339, RNA1509_6662} {RNA1509_6339, RNA1509_6662, RNA815_3368} |
| 8. | MligTC455_48361 | 535 | 11.14 | Mlig455_017451, Mlig455_030948 | Neo: - Age: - Region-enriched R3: 2.862/0.00014 |
1.732 | - | 0.765 | - | - | - | 0.967 | Mlig455_017451 {REF} {Length: 4246} {Pfam: Death domain [PF00531.24, score=28.9]} {Celegans: WBGene00002041, hum-8, Heavy chain, Unconventional Myosin, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=107, Expect=1e-23]} {RNA1509_29690} {RNA1310_5206.1} {RNA815_3494} Mlig455_030948 {REF} {Length: 4219} {Pfam: Death domain [PF00531.24, score=29.8]} {Celegans: WBGene00002041, hum-8, Heavy chain, Unconventional Myosin, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=107, Expect=1e-23]} {RNA1509_29690} {RNA1310_5206.1} {RNA815_3494} |
|
| 9. | MligTC455_15909 | 17086 | 355.96 | Mlig455_046415 | Neo: - Age: logFC(26M/2M)=9.682 |
RPS17 | 1.703 | 0.729 | - | - | - | 0.974 | - | Mlig455_046415 {REF} {Length: 586} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662} {RNA1310_57463, RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662} {RNA1509_1256, RNA1509_1357, RNA1509_4921, RNA1509_662, RNA815_12035.3} |
| 10. | MligTC455_51671 | 356 | 7.41 | Mlig455_057733 | Neo: - |
1.681 | - | - | - | 0.709 | - | 0.972 | Mlig455_057733 {REF} {Length: 2645} {Pfam: Glycine rich protein [PF12810.9, score=42.1]} {RNA1310_30682} {RNA815_62083} | |
| 11. | MligTC455_16764 | 364 | 7.57 | Mlig455_005718, Mlig455_059498 | Neo: - Age: logFC(26M/2M)=0.526 Region-enriched R4: 2.535/0.04619 |
TRHR | 0.966 | - | - | - | - | - | 0.966 | Mlig455_005718 {REF} {Length: 1648} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.8]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=53.1, Expect=3e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=53.9, Expect=1e-07]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=52.0, Expect=7e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=73.2, Expect=8e-14]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=53.1, Expect=2e-07]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [Score=197, Expect=1e-59]} {RNA1509_11108} {RNA1310_22159} {RNA815_10331} Mlig455_059498 {REF} {Length: 2130} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=59.8]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=55.5, Expect=4e-08]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=53.1, Expect=2e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=72.8, Expect=1e-13]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=54.3, Expect=8e-08]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [RH, Score=198, Expect=6e-60]} {RNA1310_22159} {RNA815_10331} |
| 12. | MligTC455_19721 | 2162 | 45.04 | Mlig455_029202 | Neo: - Age: - |
REEP5 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_029202 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=95.2]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=182, Expect=2e-58]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [Score=178, Expect=4e-57]} {Dmel: FBgn0033906, CG8331, [RH, Score=152, Expect=5e-47]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=149, Expect=5e-46]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [Score=209, Expect=2e-69]} {RNA1509_13751, RNA1509_47067} {RNA1310_18132, RNA1509_47067} {RNA1509_47067, RNA815_6742.1} |
| 13. | MligTC455_37466 | 1949 | 40.61 | Mlig455_031186 | Neo: - Age: Down-Down-Up Region-enriched R3: 1.619/0.00008 |
ARHGEF10 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_031186 {REF} {Length: 5352} {Pfam: RhoGEF domain [PF00621.22, score=105.9]; WD40 repeated domain [PF19056.2, score=87.7]; PH domain [PF19057.2, score=32.3]} {Human: ENSG00000274726, ARHGEF10, Rho guanine nucleotide exchange factor 10, [RH, Score=289, Expect=7e-80]; ENSG00000104728, ARHGEF10, Rho guanine nucleotide exchange factor 10, [RH, Score=289, Expect=7e-80]} {Mouse: ENSMUSG00000071176, Arhgef10, Rho guanine nucleotide exchange factor (GEF) 10, [RH, Score=301, Expect=5e-84]} {Dmel: FBgn0263706, CG43658, [RH, Score=249, Expect=8e-67]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [Score=115, Expect=1e-25]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=112, Expect=7e-25]} {RNA1509_2853} {RNA1310_2593.1} {RNA815_1265} |
| 14. | MligTC455_15908 | 17739 | 369.57 | Mlig455_046390 | Neo: Int S/G2/M Age: Down-Up-Up |
RPS17 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_046390 {REF} {Length: 591} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1542} {RNA1310_57463} {RNA815_12035.3} |
| 15. | MligTC455_45293 | 1305 | 27.18 | Mlig455_051600 | Neo: - Age: - |
SUSD2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_051600 {REF} {Length: 5138} {Pfam: von Willebrand factor type D domain [PF00094.27, score=37.0]} {Human: ENSG00000099994, SUSD2, sushi domain containing 2, [Score=82.8, Expect=6e-16]} {Mouse: ENSMUSG00000006342, Susd2, sushi domain containing 2, [Score=100, Expect=7e-22]} {Dmel: FBgn0051004, mesh, [Score=102, Expect=3e-22]} {RNA1509_1220, RNA1509_1883, RNA1509_34687, RNA1509_36798, RNA1509_40605} {RNA1310_2718.1, RNA1509_1883, RNA1509_34687, RNA1509_36798, RNA1509_40605} {RNA1509_1883, RNA1509_34687, RNA1509_36798, RNA1509_40605, RNA815_500} |