TomoSeq data search

Data search

Results for MligTC455_52027

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52027

2742

57.12

Mlig455_038451

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=2.259

Region-enriched R3: 2.048/0.00000
Region-enriched R5: 1.468/0.00009
Region-enriched R4: 1.426/0.00323

NPC2

Mlig455_038451 {REF} {Length: 1128} {Pfam: ML domain [PF02221.17, score=98.8]} {Human: ENSG00000119655, NPC2, NPC intracellular cholesterol transporter 2, [RH, Score=127, Expect=1e-37]} {Mouse: ENSMUSG00000021242, Npc2, NPC intracellular cholesterol transporter 2, [Score=116, Expect=7e-34]} {Dmel: FBgn0031381, Npc2a, Niemann-Pick type C-2a, [RH, Score=129, Expect=8e-39]} {Smed: dd_Smed_v6_602_0_1, dd_Smed_v6_602_0_1, [RH, Score=129, Expect=3e-39]} {RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738} {RNA1310_12229, RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738} {RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738, RNA815_4030}

Cumulative graph for MligTC455_52027

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.182	5.956	0.09735	0.66249
RegionR2	-3.098	5.956	0.00000	0.00000
RegionR3	2.048	5.956	0.00000	0.00000
RegionR4	1.426	5.956	0.00023	0.00323
RegionR5	1.468	5.956	0.00000	0.00009
RegionR6	1.026	5.956	0.00240	0.06880
RegionR7	-0.105	5.956	0.79518	1.00000
RegionR8	-1.584	5.956	0.00332	0.10069

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.914	5.956	0.28374	0.98344
RegenerationR2	0.674	5.956	0.17198	0.61154
RegenerationR3	-0.906	5.956	0.03338	0.32501
RegenerationR4	-0.179	5.956	0.68062	0.94586
RegenerationR5	-0.514	5.956	0.21600	0.65076
RegenerationR6	-1.487	5.956	0.00088	0.03213
RegenerationBL	-0.965	5.956	0.04493	0.24257
RegenerationTP	0.633	5.956	0.19227	0.63032

Genes with expression patterns similar to MligTC455_52027

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52027	2742	57.12	Mlig455_038451	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.259 Region-enriched R3: 2.048/0.00000 Region-enriched R5: 1.468/0.00009 Region-enriched R4: 1.426/0.00323	NPC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038451 {REF} {Length: 1128} {Pfam: ML domain [PF02221.17, score=98.8]} {Human: ENSG00000119655, NPC2, NPC intracellular cholesterol transporter 2, [RH, Score=127, Expect=1e-37]} {Mouse: ENSMUSG00000021242, Npc2, NPC intracellular cholesterol transporter 2, [Score=116, Expect=7e-34]} {Dmel: FBgn0031381, Npc2a, Niemann-Pick type C-2a, [RH, Score=129, Expect=8e-39]} {Smed: dd_Smed_v6_602_0_1, dd_Smed_v6_602_0_1, [RH, Score=129, Expect=3e-39]} {RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738} {RNA1310_12229, RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738} {RNA1509_19406, RNA1509_27769, RNA1509_2995, RNA1509_4004, RNA1509_42381, RNA1509_45875, RNA1509_56738, RNA815_4030}
2.	MligTC455_45589	8445	175.93	Mlig455_060231	Neo: - Age: Up-Down-Down Region-enriched R3: 2.105/0.00005	MRC1	4.239	0.849	0.805	0.758	-	0.854	0.973	Mlig455_060231 {REF} {Length: 6599} {Pfam: Lectin C-type domain [PF00059.23, score=668.9]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=86.8]} {Human: ENSG00000260314, MRC1, mannose receptor C-type 1, [RH, Score=514, Expect=1e-153]} {Mouse: ENSMUSG00000026712, Mrc1, mannose receptor, C type 1, [RH, Score=487, Expect=3e-144]} {Dmel: FBgn0035199, tfc, triforce, [Score=57.4, Expect=1e-08]} {Celegans: WBGene00020191, clec-53, C-type LECtin, [RH, Score=103, Expect=2e-23]} {Smed: dd_Smed_v6_3193_0_2, dd_Smed_v6_3193_0_2, [Score=207, Expect=7e-54]} {RNA1509_14934, RNA1509_169, RNA1509_3659, RNA1509_3870} {RNA1310_579, RNA1509_14934, RNA1509_169, RNA1509_3659, RNA1509_3870} {RNA1509_14934, RNA1509_169, RNA1509_3659, RNA1509_3870, RNA815_112.1}
3.	MligTC455_45590	6933	144.44	Mlig455_060243	Neo: - Age: Up-Down-Down Region-enriched R3: 1.918/0.00019	MRC1	3.478	0.886	-	0.805	-	0.829	0.958	Mlig455_060243 {REF} {Length: 4769} {Pfam: Lectin C-type domain [PF00059.23, score=548.8]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=62.0]; Extracellular link domain [PF00193.19, score=22.4]} {Human: ENSG00000260314, MRC1, mannose receptor C-type 1, [RH, Score=513, Expect=2e-156]} {Mouse: ENSMUSG00000026712, Mrc1, mannose receptor, C type 1, [RH, Score=485, Expect=1e-146]} {Dmel: FBgn0035199, tfc, triforce, [Score=57.4, Expect=8e-09]} {Celegans: WBGene00020191, clec-53, C-type LECtin, [RH, Score=103, Expect=1e-23]} {Smed: dd_Smed_v6_3193_0_2, dd_Smed_v6_3193_0_2, [Score=209, Expect=1e-54]} {RNA1509_169} {RNA1310_579} {RNA815_112.1}
4.	MligTC455_27981	1573	32.77	Mlig455_014661	Neo: - Age: - Region-enriched R3: 1.975/0.00314	SLC9A3R2	1.739	0.774	-	-	-	-	0.965	Mlig455_014661 {REF} {Length: 2473} {Pfam: PDZ domain [PF00595.26, score=41.4]; PDZ domain [PF17820.3, score=26.4]; PDZ domain [PF13180.8, score=23.8]} {Human: ENSG00000065054, SLC9A3R2, SLC9A3 regulator 2, [RH, Score=97.4, Expect=7e-23]} {Mouse: ENSMUSG00000002504, Slc9a3r2, solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2, [RH, Score=96.7, Expect=1e-22]; ENSMUSG00000020733, Slc9a3r1, solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1, [RH, Score=95.9, Expect=3e-22]} {Dmel: FBgn0010620, CG10939, [Score=89.7, Expect=2e-20]} {Celegans: WBGene00006438, nrfl-1, NHERF (Mammalian Na/H Exchange Regulatory Factor) Like, [Score=92.4, Expect=5e-21]} {Smed: dd_Smed_v6_3039_0_1, dd_Smed_v6_3039_0_1, [Score=110, Expect=3e-29]} {RNA1509_39084} {RNA1310_17362} {RNA815_22754.1}

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