Data search


search
Exact
Search

Results for MligTC455_52110

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52110 160 3.34 Mlig455_009429

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 1.913/0.04747

PASK Mlig455_009429 {REF} {Length: 4727} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.3]; Kinase-like [PF14531.8, score=25.5]; Fungal protein kinase [PF17667.3, score=19.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.7]} {Human: ENSG00000115687, PASK, PAS domain containing serine/threonine kinase, [RH, Score=301, Expect=4e-86]} {Mouse: ENSMUSG00000026274, Pask, PAS domain containing serine/threonine kinase, [RH, Score=315, Expect=3e-91]} {Dmel: FBgn0034950, Pask, PAS kinase, [RH, Score=304, Expect=2e-89]} {Celegans: WBGene00006814, unc-82, [Score=177, Expect=3e-45]} {Smed: dd_Smed_v6_5328_1_1, dd_Smed_v6_5328_1_1, [Score=167, Expect=4e-45]} {RNA1509_34540, RNA1509_52718} {RNA1310_5405.1, RNA1509_34540, RNA1509_52718} {RNA1509_34540, RNA1509_52718, RNA815_16361.1}

Cumulative graph for MligTC455_52110

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.586 2.457 0.11557 0.70292
RegionR2 1.498 2.457 0.18401 0.53606
RegionR3 0.675 2.457 0.50562 0.99691
RegionR4 -0.425 2.457 0.94757 1.00000
RegionR5 1.913 2.457 0.00763 0.04747
RegionR6 0.969 2.457 0.32326 0.91233
RegionR7 1.679 2.457 0.09857 0.60068
RegionR8 0.276 2.457 0.77927 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.441 2.457 0.99989 1.00000
RegenerationR2 0.568 2.457 0.36724 0.79384
RegenerationR3 0.03 2.457 0.97001 1.00000
RegenerationR4 -0.021 2.457 0.97078 1.00000
RegenerationR5 -0.223 2.457 0.72117 0.95990
RegenerationR6 0.375 2.457 0.61219 0.87543
RegenerationBL 0.526 2.457 0.56904 0.92281
RegenerationTP -5.124 2.457 0.02083 0.24704


Genes with expression patterns similar to MligTC455_52110

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52110 160 3.34 Mlig455_009429

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 1.913/0.04747

PASK 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009429 {REF} {Length: 4727} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.3]; Kinase-like [PF14531.8, score=25.5]; Fungal protein kinase [PF17667.3, score=19.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.7]} {Human: ENSG00000115687, PASK, PAS domain containing serine/threonine kinase, [RH, Score=301, Expect=4e-86]} {Mouse: ENSMUSG00000026274, Pask, PAS domain containing serine/threonine kinase, [RH, Score=315, Expect=3e-91]} {Dmel: FBgn0034950, Pask, PAS kinase, [RH, Score=304, Expect=2e-89]} {Celegans: WBGene00006814, unc-82, [Score=177, Expect=3e-45]} {Smed: dd_Smed_v6_5328_1_1, dd_Smed_v6_5328_1_1, [Score=167, Expect=4e-45]} {RNA1509_34540, RNA1509_52718} {RNA1310_5405.1, RNA1509_34540, RNA1509_52718} {RNA1509_34540, RNA1509_52718, RNA815_16361.1}
2. MligTC455_52111 120 2.5 Mlig455_036893

Neo: -

Age: -

Region-enriched R5: 2.209/0.02779

5.532 0.970 0.996 0.894 0.798 0.901 0.973 Mlig455_036893 {REF} {Length: 1778} {RNA1310_41662.1} {RNA815_33206}
3. MligTC455_35970 192 3.99 Mlig455_061768

Neo: -

Age: Up-Up-Down

Region-enriched R5: 1.751/0.02587

1.855 - 0.899 - - - 0.956 Mlig455_061768 {REF} {Length: 1528} {RNA1509_44181} {RNA1310_44078, RNA1509_44181} {RNA1509_44181, RNA815_34988}
4. MligTC455_12212 89 1.86 Mlig455_044685

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 4.084/0.00005

1.847 0.883 - - - - 0.964 Mlig455_044685 {REF} {Length: 3776} {TRANSSPLICED} {Pfam: Myb/SANT-like DNA-binding domain [PF13837.8, score=25.9]; Myb-like DNA-binding domain [PF13921.8, score=19.1]; Myb/SANT-like DNA-binding domain [PF13873.8, score=18.7]} {RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1310_24568, RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1509_24862, RNA1509_54105, RNA1509_56945, RNA815_11589}
5. MligTC455_11334 78 1.62 Mlig455_057602

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 4.130/0.00067

1.811 - 0.950 - - - 0.861 Mlig455_057602 {REF} {Length: 2858} {RNA1509_19017, RNA1509_24905} {RNA1310_40025, RNA1509_19017, RNA1509_24905} {RNA1509_19017, RNA1509_24905, RNA815_26955}
6. MligTC455_24888 155 3.23 Mlig455_019084, Mlig455_064280

Neo: -

Age: Up-Down-Up

1.788 - - - 0.834 0.954 -

Mlig455_019084 {REF} {Length: 3521} {RNA1509_35560, RNA1509_47523} {RNA1310_18618, RNA1509_35560, RNA1509_47523} {RNA1509_35560, RNA1509_47523, RNA815_20762}

Mlig455_064280 {REF} {Length: 211} {NoTransDecoderORF} {RNA1509_47523} {RNA1310_25677.2} {RNA815_20762}
7. MligTC455_20743 385 8.02 Mlig455_030435

Neo: -

Age: Down-Up-Down

TNIK 1.717 - - - - 0.961 0.756 Mlig455_030435 {REF} {Length: 6454} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=157.0]; ABC1 atypical kinase-like domain [PF03109.18, score=34.0]; CNH domain [PF00780.24, score=31.8]; Fungal protein kinase [PF17667.3, score=23.2]} {Human: ENSG00000154310, TNIK, TRAF2 and NCK interacting kinase, [RH, Score=504, Expect=2e-159]; ENSG00000141503, MINK1, misshapen like kinase 1, [RH, Score=482, Expect=8e-152]} {Mouse: ENSMUSG00000027692, Tnik, TRAF2 and NCK interacting kinase, [RH, Score=504, Expect=2e-160]; ENSMUSG00000020827, Mink1, misshapen-like kinase 1 (zebrafish), [RH, Score=483, Expect=3e-152]} {Dmel: FBgn0010909, msn, misshapen, [RH, Score=509, Expect=8e-161]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [RH, Score=505, Expect=4e-163]} {Smed: dd_Smed_v6_1029_0_1, dd_Smed_v6_1029_0_1, [RH, Score=446, Expect=6e-142]} {RNA1509_35146, RNA1509_5951} {RNA1310_3546, RNA1509_35146, RNA1509_5951} {RNA1509_35146, RNA1509_5951, RNA815_6714}
8. MligTC455_20744 340 7.08 Mlig455_030472

Neo: -

Age: -

1.688 - - - - 0.954 0.734 Mlig455_030472 {REF} {Length: 1379} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_18800} {RNA815_24990}
9. MligTC455_38751 286 5.97 Mlig455_041346

Neo: Germline

Age: -

AP3M1 1.688 - - 0.735 - - 0.953 Mlig455_041346 {REF} {Length: 2725} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=210.9]; Clathrin adaptor complex small chain [PF01217.22, score=41.7]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=531, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=503, Expect=5e-178]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=481, Expect=3e-169]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [Score=447, Expect=2e-156]} {RNA1509_42193} {RNA1310_18368} {RNA815_13395}
10. MligTC455_25177 330 6.87 Mlig455_058575

Neo: -

Age: Up-Down-Down

1.661 - 0.952 - - - 0.709 Mlig455_058575 {REF} {Length: 3172} {RNA1509_34496, RNA1509_56824} {RNA1310_29369, RNA1509_34496} {RNA1509_34496, RNA815_24472}
11. MligTC455_29203 334 6.95 Mlig455_037140

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.614

0.967 - - - 0.967 - - Mlig455_037140 {REF} {Length: 5032} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=37.3]; Ankyrin repeat [PF00023.32, score=28.8]; Ankyrin repeat [PF13606.8, score=25.8]; Ankyrin repeats (many copies) [PF13637.8, score=24.6]; Ankyrin repeats (many copies) [PF13857.8, score=22.2]; Mab-21 protein [PF03281.16, score=20.5]} {RNA1509_39416} {RNA1310_14401} {RNA815_5545.1}
12. MligTC455_29205 321 6.69 Mlig455_052289

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.669

ANK1 0.967 - - - 0.967 - - Mlig455_052289 {REF} {Length: 6562} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=364.7]; Ankyrin repeat [PF00023.32, score=234.1]; Ankyrin repeat [PF13606.8, score=222.8]; Ankyrin repeats (many copies) [PF13637.8, score=217.7]; Ankyrin repeats (many copies) [PF13857.8, score=194.7]; PEGA domain [PF08308.13, score=40.5]; Protein of unknown function (DUF3979) [PF13141.8, score=35.2]; QSOX Trx-like domain [PF18108.3, score=21.5]; Mab-21 protein [PF03281.16, score=19.3]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=231, Expect=5e-61]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=228, Expect=3e-60]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=225, Expect=2e-59]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=217, Expect=7e-57]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=207, Expect=4e-54]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=206, Expect=1e-53]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=222, Expect=4e-60]} {RNA1509_39416} {RNA1310_6142.1} {RNA815_6750.1}
13. MligTC455_29204 333 6.93 Mlig455_052247

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.586

ANK3 0.963 - - - 0.963 - - Mlig455_052247 {REF} {Length: 5485} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=62.8]; Ankyrin repeats (many copies) [PF13637.8, score=51.6]; Ankyrin repeat [PF00023.32, score=40.1]; Ankyrin repeat [PF13606.8, score=38.1]; Ankyrin repeats (many copies) [PF13857.8, score=34.4]; Mab-21 protein [PF03281.16, score=20.6]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=65.9, Expect=3e-10]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=2e-10]} {Dmel: FBgn0031473, CG3104, [Score=74.3, Expect=6e-14]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=70.5, Expect=2e-12]} {RNA1509_39688} {RNA1310_6142.1} {RNA815_6750.1}
14. MligTC455_22929 333 6.94 Mlig455_002604, Mlig455_050280

Neo: -

Age: -

AFTPH 0.961 - - - - 0.961 -

Mlig455_002604 {REF} {Length: 943} {RNA1509_3250} {RNA1310_7253.1} {RNA815_4748}

Mlig455_050280 {REF} {Length: 4398} {TRANSSPLICED} {Pfam: Clathrin-binding box of Aftiphilin, vesicle trafficking [PF15045.8, score=24.4]} {Human: ENSG00000119844, AFTPH, aftiphilin, [Score=69.7, Expect=1e-11]} {Mouse: ENSMUSG00000049659, Aftph, aftiphilin, [RH, Score=72.4, Expect=1e-12]} {RNA1509_3250, RNA1509_52946} {RNA1310_7253.1, RNA1509_52946} {RNA1509_52946, RNA815_5478}
15. MligTC455_45416 37 0.77 Mlig455_048800

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_048800 {REF} {Length: 2619} {NoTransDecoderORF} {RNA1509_55284} {RNA1310_112938} {RNA815_36946}
16. MligTC455_06620 200 4.16 Mlig455_004955

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.101/0.00930

0.959 - - - 0.959 - - Mlig455_004955 {REF} {Length: 3483} {RNA1509_40456} {RNA1310_2192.1} {RNA815_16881}
17. MligTC455_49161 139 2.9 Mlig455_062367

Neo: Irradiation

Age: -

0.959 - - - - - 0.959 Mlig455_062367 {REF} {Length: 4268} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=275.1]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=244, Expect=3e-75]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=300, Expect=1e-96]} {RNA1509_31673} {RNA1310_2142} {RNA815_14799}
18. MligTC455_51299 435 9.06 Mlig455_004044

Neo: -

Age: -

NCOR1 0.958 - - - - - 0.958 Mlig455_004044 {REF} {Length: 5997} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=23.3]} {Human: ENSG00000141027, NCOR1, nuclear receptor corepressor 1, [Score=179, Expect=2e-44]; ENSG00000196498, NCOR2, nuclear receptor corepressor 2, [Score=174, Expect=4e-43]} {Mouse: ENSMUSG00000018501, Ncor1, nuclear receptor co-repressor 1, [Score=178, Expect=2e-44]; ENSMUSG00000029478, Ncor2, nuclear receptor co-repressor 2, [Score=177, Expect=5e-44]} {Dmel: FBgn0265523, Smr, Smrter, [Score=171, Expect=3e-42]} {Smed: dd_Smed_v6_7709_0_1, dd_Smed_v6_7709_0_1, [Score=184, Expect=8e-47]} {RNA1509_6957} {RNA1310_15304.1} {RNA815_1593}
19. MligTC455_43410 203 4.22 Mlig455_057515

Neo: -

Age: logFC(26M/2M)=-0.214

TRAF5 0.957 - - - 0.957 - - Mlig455_057515 {REF} {Length: 2170} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.7]; Seven in absentia protein family [PF03145.18, score=25.7]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=197, Expect=7e-55]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=173, Expect=2e-46]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=96.7, Expect=6e-21]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_10424_0_1, dd_Smed_v6_10424_0_1, [Score=109, Expect=2e-25]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
20. MligTC455_11631 21 0.44 Mlig455_004595

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_004595 {REF} {Length: 2076} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [Score=47.0, Expect=1e-05]} {RNA1310_44557.1} {RNA815_31853}
21. MligTC455_10518 19 0.39 Mlig455_033554

Neo: -

Age: -

RHCG 0.953 - - - - 0.953 - Mlig455_033554 {REF} {Length: 3086} {Pfam: Ammonium Transporter Family [PF00909.23, score=406.6]; Death domain [PF00531.24, score=36.2]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=23.6]} {Human: ENSG00000140519, RHCG, Rh family C glycoprotein, [Score=60.8, Expect=5e-09]} {Mouse: ENSMUSG00000030549, Rhcg, Rhesus blood group-associated C glycoprotein, [Score=57.4, Expect=5e-08]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [RH, Score=441, Expect=2e-145]} {Celegans: WBGene00000135, amt-3, Putative ammonium transporter 3, [RH, Score=407, Expect=9e-131]} {Smed: dd_Smed_v6_2323_0_1, dd_Smed_v6_2323_0_1, [Score=52.4, Expect=8e-07]} {RNA1509_53274} {RNA1310_14916} {RNA815_10943}
22. MligTC455_35439 471 9.81 Mlig455_052921

Neo: Int S/G2/M

Age: Up-Down-Up

QDPR 0.953 - 0.953 - - - - Mlig455_052921 {REF} {Length: 2537} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=61.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=33.8]; short chain dehydrogenase [PF00106.27, score=30.6]; NAD dependent epimerase/dehydratase family [PF01370.23, score=20.5]} {Human: ENSG00000151552, QDPR, quinoid dihydropteridine reductase, [RH, Score=245, Expect=1e-76]} {Mouse: ENSMUSG00000015806, Qdpr, quinoid dihydropteridine reductase, [RH, Score=247, Expect=1e-77]} {Dmel: FBgn0035964, Dhpr, Dihydropteridine reductase, [RH, Score=223, Expect=1e-68]} {Celegans: WBGene00011398, qdpr-1, Quinoid DihydroPteridine Reductase, [Score=224, Expect=3e-69]} {Smed: dd_Smed_v6_2408_0_1, dd_Smed_v6_2408_0_1, [RH, Score=204, Expect=2e-61]} {RNA1509_19705} {RNA1310_19924} {RNA815_8952}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA