Data search
Results for MligTC455_52125
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52125 | 467 | 9.73 | Mlig455_019381 | Neo: Int S/G2/M Age: Up-Down-Up |
TTC37 | Mlig455_019381 {REF} {Length: 4479} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=72.5]; Tetratricopeptide repeat [PF00515.30, score=65.3]; Tetratricopeptide repeat [PF13431.8, score=59.0]; TPR repeat [PF13414.8, score=50.1]; Tetratricopeptide repeat [PF13181.8, score=50.0]; Tetratricopeptide repeat [PF13371.8, score=43.7]; Tetratricopeptide repeat [PF14559.8, score=36.3]; Tetratricopeptide repeat [PF13432.8, score=30.4]; Tetratricopeptide repeat [PF13428.8, score=28.4]; Tetratricopeptide repeat [PF13174.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=24.9]} {Human: ENSG00000198677, TTC37, tetratricopeptide repeat domain 37, [RH, Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000033991, Ttc37, tetratricopeptide repeat domain 37, [RH, Score=112, Expect=2e-24]} {Dmel: FBgn0033376, CG8777, [RH, Score=108, Expect=2e-23]} {RNA1509_6117} {RNA1310_1556.1} {RNA815_497.1} |
Cumulative graph for MligTC455_52125
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.452 | 3.733 | 0.77510 | 1.00000 | |
| RegionR2 | 0.093 | 3.733 | 0.88606 | 1.00000 | |
| RegionR3 | 0.231 | 3.733 | 0.64691 | 1.00000 | |
| RegionR4 | 0.291 | 3.733 | 0.60920 | 0.92074 | |
| RegionR5 | 0.739 | 3.733 | 0.08944 | 0.28242 | |
| RegionR6 | -0.229 | 3.733 | 0.66921 | 1.00000 | |
| RegionR7 | 0.147 | 3.733 | 0.82841 | 1.00000 | |
| RegionR8 | -0.822 | 3.733 | 0.41918 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.132 | 3.733 | 0.23402 | 0.96368 | |
| RegenerationR2 | 0.421 | 3.733 | 0.38355 | 0.80377 | |
| RegenerationR3 | 0.218 | 3.733 | 0.68788 | 0.94330 | |
| RegenerationR4 | 0.263 | 3.733 | 0.63532 | 0.92535 | |
| RegenerationR5 | 0.14 | 3.733 | 0.77524 | 0.98034 | |
| RegenerationR6 | 0.588 | 3.733 | 0.29127 | 0.64162 | |
| RegenerationBL | 0.908 | 3.733 | 0.18903 | 0.52202 | |
| RegenerationTP | 0.373 | 3.733 | 0.64150 | 0.98411 |
Genes with expression patterns similar to MligTC455_52125
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52125 | 467 | 9.73 | Mlig455_019381 | Neo: Int S/G2/M Age: Up-Down-Up |
TTC37 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019381 {REF} {Length: 4479} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=72.5]; Tetratricopeptide repeat [PF00515.30, score=65.3]; Tetratricopeptide repeat [PF13431.8, score=59.0]; TPR repeat [PF13414.8, score=50.1]; Tetratricopeptide repeat [PF13181.8, score=50.0]; Tetratricopeptide repeat [PF13371.8, score=43.7]; Tetratricopeptide repeat [PF14559.8, score=36.3]; Tetratricopeptide repeat [PF13432.8, score=30.4]; Tetratricopeptide repeat [PF13428.8, score=28.4]; Tetratricopeptide repeat [PF13174.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=24.9]} {Human: ENSG00000198677, TTC37, tetratricopeptide repeat domain 37, [RH, Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000033991, Ttc37, tetratricopeptide repeat domain 37, [RH, Score=112, Expect=2e-24]} {Dmel: FBgn0033376, CG8777, [RH, Score=108, Expect=2e-23]} {RNA1509_6117} {RNA1310_1556.1} {RNA815_497.1} |
| 2. | MligTC455_30971 | 714 | 14.87 | Mlig455_008820, Mlig455_008918 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.746/0.00005 |
MSH6 | 2.489 | 0.771 | - | - | 0.759 | 0.959 | - | Mlig455_008820 {REF} {Length: 4904} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=245.5]; MutS domain I [PF01624.22, score=121.2]; MutS domain III [PF05192.20, score=110.7]; PWWP domain [PF00855.19, score=49.6]; MutS family domain IV [PF05190.20, score=32.2]; MutS domain II [PF05188.19, score=26.6]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [RH, Score=997, Expect=0.0]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [RH, Score=1016, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [RH, Score=826, Expect=0.0]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_15463_0_1, dd_Smed_v6_15463_0_1, [RH, Score=862, Expect=0.0]} {RNA1509_49698, RNA1509_8873} {RNA1310_1357.1, RNA1509_49698, RNA1509_8873} {RNA1509_49698, RNA1509_8873, RNA815_8019} Mlig455_008918 {REF} {Length: 5066} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=111.5]; MutS family domain IV [PF05190.20, score=33.0]; MutS domain II [PF05188.19, score=27.8]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=764, Expect=0.0]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=775, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [Score=620, Expect=0.0]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=556, Expect=0.0]} {Smed: dd_Smed_v6_15463_0_1, dd_Smed_v6_15463_0_1, [Score=666, Expect=0.0]} {RNA1509_8873} {RNA1310_1357.1} {RNA815_8507} |
| 3. | MligTC455_20073 | 1050 | 21.88 | Mlig455_021812 | Neo: - Age: - |
CWC22 | 1.789 | - | - | - | - | 0.811 | 0.978 | Mlig455_021812 {REF} {Length: 2402} {TRANSSPLICED} {Pfam: MA3 domain [PF02847.19, score=86.0]; MIF4G domain [PF02854.21, score=48.8]} {Human: ENSG00000163510, CWC22, CWC22 spliceosome associated protein homolog, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000027014, Cwc22, CWC22 spliceosome-associated protein, [RH, Score=564, Expect=0.0]; ENSMUSG00000096729, Gm13695, predicted gene 13695, [RH, Score=561, Expect=0.0]; ENSMUSG00000094336, Gm13693, predicted gene 13693, [RH, Score=561, Expect=0.0]; ENSMUSG00000094125, Gm13698, predicted gene 13698, [RH, Score=561, Expect=0.0]; ENSMUSG00000096484, Gm13696, predicted gene 13696, [RH, Score=561, Expect=0.0]; ENSMUSG00000096337, Gm13694, predicted gene 13694, [RH, Score=561, Expect=0.0]; ENSMUSG00000095824, Gm13697, predicted gene 13697, [RH, Score=561, Expect=0.0]; ENSMUSG00000079247, Gm13691, predicted gene 13691, [RH, Score=561, Expect=0.0]} {Dmel: FBgn0086707, ncm, nucampholin, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00002957, let-858, Pre-mRNA-splicing factor CWC22 homolog, [RH, Score=503, Expect=7e-168]} {Smed: dd_Smed_v6_5597_0_1, dd_Smed_v6_5597_0_1, [RH, Score=471, Expect=4e-159]} {RNA1509_42093, RNA1509_7437} {RNA1310_7876, RNA1509_42093, RNA1509_7437} {RNA1509_42093, RNA1509_7437, RNA815_2944} |
| 4. | MligTC455_44312 | 751 | 15.65 | Mlig455_004600 | Neo: - Age: - Regeneration-depleted R6: -2.473 |
MYL6B | 1.787 | - | - | 0.837 | 0.950 | - | - | Mlig455_004600 {REF} {Length: 1435} {Pfam: EF-hand domain [PF13405.8, score=39.0]; EF-hand domain pair [PF13499.8, score=33.1]; EF-hand domain pair [PF13833.8, score=33.1]; EF hand [PF00036.34, score=23.9]} {Human: ENSG00000196465, MYL6B, myosin light chain 6B, [Score=116, Expect=1e-31]; ENSG00000198336, MYL4, myosin light chain 4, [Score=111, Expect=9e-30]} {Mouse: ENSMUSG00000039824, Myl6b, myosin, light polypeptide 6B, [Score=117, Expect=5e-32]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=114, Expect=3e-31]} {Dmel: FBgn0002772, Mlc1, Myosin alkali light chain 1, [RH, Score=116, Expect=1e-32]} {Celegans: WBGene00003371, mlc-3, Myosin, essential light chain, [RH, Score=130, Expect=3e-38]} {Smed: dd_Smed_v6_223_0_1, dd_Smed_v6_223_0_1, [RH, Score=251, Expect=6e-86]} {RNA1509_3915} {RNA1310_33866} {RNA815_15285} |
| 5. | MligTC455_38945 | 3598 | 74.95 | Mlig455_019505 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.260 Region-enriched R7: 1.955/0.00000 |
HSP90B1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_019505 {REF} {Length: 4318} {Pfam: Hsp90 protein [PF00183.20, score=709.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=49.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.1]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [RH, Score=909, Expect=0.0]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [RH, Score=885, Expect=0.0]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [RH, Score=979, Expect=0.0]} {RNA1509_34044, RNA1509_37551, RNA1509_537} {RNA1310_2681, RNA1509_34044, RNA1509_37551} {RNA1509_34044, RNA1509_37551, RNA815_1298.2} |
| 6. | MligTC455_44398 | 552 | 11.5 | Mlig455_034087 | Neo: - Age: - |
RNF121 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_034087 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: RING-H2 zinc finger domain [PF12678.9, score=29.5]; Ring finger domain [PF13639.8, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.8]; zinc-RING finger domain [PF14634.8, score=22.7]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=19.5]} {Human: ENSG00000137522, RNF121, ring finger protein 121, [RH, Score=424, Expect=3e-149]} {Mouse: ENSMUSG00000070426, Rnf121, ring finger protein 121, [RH, Score=423, Expect=3e-149]} {Dmel: FBgn0030873, CG15814, [RH, Score=392, Expect=2e-137]} {Celegans: WBGene00007626, rnf-121, RING finger protein 121, [RH, Score=362, Expect=2e-125]} {Smed: dd_Smed_v6_4887_0_1, dd_Smed_v6_4887_0_1, [RH, Score=452, Expect=4e-161]} {RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1310_28434.1, RNA1509_18705, RNA1509_19174, RNA1509_44036} {RNA1509_18705, RNA1509_19174, RNA1509_44036, RNA815_13155} |
| 7. | MligTC455_18148 | 1499 | 31.23 | Mlig455_048309, Mlig455_048353 | Neo: Int S/G2/M Age: - |
U2AF1L5 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_048309 {REF} {Length: 2547} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=51.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=28.7]; Torus domain [PF16131.7, score=25.9]; Zinc finger domain [PF18345.3, score=24.1]} {Human: ENSG00000275895, U2AF1L5, U2 small nuclear RNA auxiliary factor 1 like 5, [RH, Score=337, Expect=3e-118]; ENSG00000160201, U2AF1, U2 small nuclear RNA auxiliary factor 1, [RH, Score=337, Expect=3e-118]} {Mouse: ENSMUSG00000061613, U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, [RH, Score=337, Expect=2e-118]; ENSMUSG00000078765, U2af1l4, U2 small nuclear RNA auxiliary factor 1-like 4, [RH, Score=332, Expect=1e-116]; ENSMUSG00000109378, Gm49396, predicted gene, 49396, [RH, Score=332, Expect=1e-116]} {Dmel: FBgn0017457, U2af38, U2 small nuclear riboprotein auxiliary factor 38, [RH, Score=329, Expect=6e-115]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [RH, Score=265, Expect=3e-89]} {Smed: dd_Smed_v6_4061_0_2, dd_Smed_v6_4061_0_2, [RH, Score=361, Expect=3e-128]} {RNA1509_16766, RNA1509_16935} {RNA1310_24807, RNA1509_16766, RNA1509_16935} {RNA1509_16766, RNA1509_16935, RNA815_15940.1} Mlig455_048353 {REF} {Length: 1999} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=51.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=28.7]; Torus domain [PF16131.7, score=25.9]; Zinc finger domain [PF18345.3, score=24.1]} {Human: ENSG00000275895, U2AF1L5, U2 small nuclear RNA auxiliary factor 1 like 5, [RH, Score=337, Expect=3e-118]; ENSG00000160201, U2AF1, U2 small nuclear RNA auxiliary factor 1, [RH, Score=337, Expect=3e-118]} {Mouse: ENSMUSG00000061613, U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, [RH, Score=337, Expect=2e-118]; ENSMUSG00000078765, U2af1l4, U2 small nuclear RNA auxiliary factor 1-like 4, [RH, Score=332, Expect=1e-116]; ENSMUSG00000109378, Gm49396, predicted gene, 49396, [RH, Score=332, Expect=1e-116]} {Dmel: FBgn0017457, U2af38, U2 small nuclear riboprotein auxiliary factor 38, [RH, Score=329, Expect=6e-115]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [RH, Score=265, Expect=3e-89]} {Smed: dd_Smed_v6_4061_0_2, dd_Smed_v6_4061_0_2, [RH, Score=361, Expect=3e-128]} {RNA1509_16935} {RNA1310_24807} {RNA815_15940.1} |
| 8. | MligTC455_49751 | 1607 | 33.47 | Mlig455_054100, Mlig455_054109 | Neo: Int S/G2/M |
EXOSC3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_054100 {REF} {Length: 1934} {TRANSSPLICED} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1, RNA1509_14817} {RNA1509_14817, RNA815_10248} Mlig455_054109 {REF} {Length: 1465} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1} {RNA815_10248} |