Data search
Results for MligTC455_52155
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52155 | 342 | 7.13 | Mlig455_003563 | Neo: - Age: logFC(26M/2M)=-0.399 Region-enriched R3: 1.440/0.01270 |
LCP1 | Mlig455_003563 {REF} {Length: 4879} {Pfam: Calponin homology (CH) domain [PF00307.33, score=253.3]; CAMSAP CH domain [PF11971.10, score=41.5]; EF hand [PF00036.34, score=35.4]; EF-hand domain pair [PF13499.8, score=34.7]; EF hand [PF13202.8, score=34.3]; EF-hand domain [PF13405.8, score=31.6]; EF-hand domain [PF14658.8, score=19.1]} {Human: ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [RH, Score=526, Expect=8e-180]; ENSG00000102024, PLS3, plastin 3, [RH, Score=526, Expect=1e-179]; ENSG00000120756, PLS1, plastin 1, [RH, Score=516, Expect=2e-175]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [RH, Score=531, Expect=0.0]; ENSMUSG00000049493, Pls1, plastin 1 (I-isoform), [RH, Score=530, Expect=0.0]; ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [RH, Score=526, Expect=6e-180]} {Dmel: FBgn0024238, Fim, Fimbrin, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00022425, plst-1, PLaSTin (Actin bundling protein) homolog, [RH, Score=399, Expect=5e-134]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [Score=477, Expect=4e-161]} {RNA1509_12992, RNA1509_56632, RNA1509_7501} {RNA1310_8848, RNA1509_12992, RNA1509_56632} {RNA1509_12992, RNA1509_56632, RNA815_2895} |
Cumulative graph for MligTC455_52155
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.098 | 3.286 | 0.45957 | 1.00000 | |
| RegionR2 | 0.765 | 3.286 | 0.16888 | 0.51426 | |
| RegionR3 | 1.44 | 3.286 | 0.00035 | 0.01270 | |
| RegionR4 | 0.001 | 3.286 | 0.98205 | 1.00000 | |
| RegionR5 | 0.333 | 3.286 | 0.41573 | 0.77538 | |
| RegionR6 | 0.723 | 3.286 | 0.11368 | 0.61572 | |
| RegionR7 | -2.922 | 3.286 | 0.00481 | 0.10721 | |
| RegionR8 | 0.758 | 3.286 | 0.28848 | 0.91587 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.056 | 3.286 | 0.36260 | 1.00000 | |
| RegenerationR2 | -0.056 | 3.286 | 0.89202 | 1.00000 | |
| RegenerationR3 | -0.853 | 3.286 | 0.05358 | 0.39879 | |
| RegenerationR4 | 0.194 | 3.286 | 0.67937 | 0.94555 | |
| RegenerationR5 | -0.376 | 3.286 | 0.37572 | 0.78431 | |
| RegenerationR6 | -0.319 | 3.286 | 0.51217 | 0.81500 | |
| RegenerationBL | 1.114 | 3.286 | 0.11347 | 0.39795 | |
| RegenerationTP | 1.945 | 3.286 | 0.01257 | 0.19063 |
Genes with expression patterns similar to MligTC455_52155
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52155 | 342 | 7.13 | Mlig455_003563 | Neo: - Age: logFC(26M/2M)=-0.399 Region-enriched R3: 1.440/0.01270 |
LCP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003563 {REF} {Length: 4879} {Pfam: Calponin homology (CH) domain [PF00307.33, score=253.3]; CAMSAP CH domain [PF11971.10, score=41.5]; EF hand [PF00036.34, score=35.4]; EF-hand domain pair [PF13499.8, score=34.7]; EF hand [PF13202.8, score=34.3]; EF-hand domain [PF13405.8, score=31.6]; EF-hand domain [PF14658.8, score=19.1]} {Human: ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [RH, Score=526, Expect=8e-180]; ENSG00000102024, PLS3, plastin 3, [RH, Score=526, Expect=1e-179]; ENSG00000120756, PLS1, plastin 1, [RH, Score=516, Expect=2e-175]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [RH, Score=531, Expect=0.0]; ENSMUSG00000049493, Pls1, plastin 1 (I-isoform), [RH, Score=530, Expect=0.0]; ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [RH, Score=526, Expect=6e-180]} {Dmel: FBgn0024238, Fim, Fimbrin, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00022425, plst-1, PLaSTin (Actin bundling protein) homolog, [RH, Score=399, Expect=5e-134]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [Score=477, Expect=4e-161]} {RNA1509_12992, RNA1509_56632, RNA1509_7501} {RNA1310_8848, RNA1509_12992, RNA1509_56632} {RNA1509_12992, RNA1509_56632, RNA815_2895} |
| 2. | MligTC455_28153 | 87 | 1.82 | Mlig455_023355 | Neo: - Age: Down-Up-Down |
1.711 | - | - | - | 0.750 | 0.961 | - | Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1} | |
| 3. | MligTC455_34868 | 1265 | 26.36 | Mlig455_005678 | Neo: - Age: Down-Up-Up |
CALM2 | 1.654 | - | - | - | 0.702 | 0.952 | - | Mlig455_005678 {REF} {Length: 1313} {Pfam: EF hand [PF00036.34, score=124.8]; EF-hand domain pair [PF13499.8, score=117.9]; EF hand [PF13202.8, score=101.9]; EF-hand domain [PF13405.8, score=99.9]; EF-hand domain pair [PF13833.8, score=77.4]; Dockerin type I domain [PF00404.20, score=45.3]; EF-hand domain [PF14658.8, score=41.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.8]; EF-hand domain [PF08976.13, score=24.8]; Family of unknown function (DUF5580) [PF17743.3, score=19.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=7e-43]; ENSG00000160014, CALM3, calmodulin 3, [Score=140, Expect=7e-43]; ENSG00000198668, CALM1, calmodulin 1, [Score=140, Expect=7e-43]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=140, Expect=5e-43]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=140, Expect=5e-43]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=140, Expect=5e-43]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=134, Expect=7e-41]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=6e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=138, Expect=1e-42]} {RNA1509_12165, RNA1509_40867} {RNA1310_49287, RNA1509_12165, RNA1509_40867} {RNA1509_12165, RNA1509_40867, RNA815_17221.2} |
| 4. | MligTC455_28144 | 413 | 8.6 | Mlig455_004583, Mlig455_014444, Mlig455_017702, Mlig455_031687, Mlig455_040527 | Neo: - Age: - |
0.983 | - | - | - | - | 0.983 | - | Mlig455_004583 {REF} {Length: 1809} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_014444 {REF} {Length: 2800} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_017702 {REF} {Length: 1835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_031687 {REF} {Length: 2190} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_040527 {REF} {Length: 2301} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} |
|
| 5. | MligTC455_23774 | 749 | 15.6 | Mlig455_051848, Mlig455_051861 | Neo: - Age: - Region-enriched R7: 1.943/0.04725 |
0.98 | - | - | - | - | 0.980 | - | Mlig455_051848 {REF} {Length: 1676} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} Mlig455_051861 {REF} {Length: 1572} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} |
|
| 6. | MligTC455_28136 | 87 | 1.82 | Mlig455_001489 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_001489 {REF} {Length: 2208} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} | |
| 7. | MligTC455_28151 | 69 | 1.43 | Mlig455_052923 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_052923 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613} | |
| 8. | MligTC455_49461 | 310 | 6.45 | Mlig455_038212 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.921/0.01372 |
ABCB6 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_038212 {REF} {Length: 3868} {TRANSSPLICED} {Pfam: Mitochondrial ABC-transporter N-terminal five TM region [PF16185.7, score=201.8]; ABC transporter transmembrane region [PF00664.25, score=118.3]; ABC transporter [PF00005.29, score=117.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=20.9]; RsgA GTPase [PF03193.18, score=18.6]} {Human: ENSG00000115657, ABCB6, ATP binding cassette subfamily B member 6 (Langereis blood group), [RH, Score=728, Expect=0.0]} {Mouse: ENSMUSG00000026198, Abcb6, ATP-binding cassette, sub-family B (MDR/TAP), member 6, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0038376, Hmt-1, Heavy metal tolerance factor 1, [RH, Score=816, Expect=0.0]} {Celegans: WBGene00001815, hmt-1, Heavy Metal Tolerance factor; Heavy metal tolerance factor 1, [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_7348_0_1, dd_Smed_v6_7348_0_1, [RH, Score=821, Expect=0.0]} {RNA1509_41047, RNA1509_5979} {RNA1310_2900, RNA1509_41047} {RNA1509_41047, RNA815_4379} |
| 9. | MligTC455_35882 | 47 | 0.99 | Mlig455_058278 | Neo: - Age: - Region-enriched R4: 3.066/0.02470 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_058278 {REF} {Length: 133} {NoTransDecoderORF} {RNA1509_52793} {RNA1310_10196} {RNA815_54846} | |
| 10. | MligTC455_17524 | 186 | 3.87 | Mlig455_019598 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_019598 {REF} {Length: 2178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=88.0]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_35331} {RNA1310_2795.1} {RNA815_4169} |
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