Data search
Results for MligTC455_52203
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52203 | 111 | 2.31 | Mlig455_017324, Mlig455_029112, Mlig455_048914 | Neo: - Age: - Region-enriched R2: 4.189/0.01995 Regeneration-upregulated R6: 6.548 Regeneration-enriched R6: 6.548 |
Mlig455_017324 {REF} {Length: 2300} {NoTransDecoderORF} {RNA1509_56959} {RNA1310_12656} {RNA815_27954} Mlig455_029112 {REF} {Length: 478} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_27954} Mlig455_048914 {REF} {Length: 899} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_32537} |
Cumulative graph for MligTC455_52203
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.922 | 2.041 | 1.00000 | 1.00000 | |
| RegionR2 | 4.189 | 2.041 | 0.00088 | 0.01995 | |
| RegionR3 | -2.239 | 2.041 | 1.00000 | 1.00000 | |
| RegionR4 | 0.599 | 2.041 | 0.31747 | 0.63392 | |
| RegionR5 | 2.524 | 2.041 | 0.00807 | 0.04937 | |
| RegionR6 | -2.386 | 2.041 | 1.00000 | 1.00000 | |
| RegionR7 | -0.636 | 2.041 | 0.81553 | 1.00000 | |
| RegionR8 | 1.87 | 2.041 | 0.29376 | 0.92260 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.864 | 2.041 | 0.99997 | 1.00000 | |
| RegenerationR2 | 1.368 | 2.041 | 0.06448 | 0.41603 | |
| RegenerationR3 | 5.071 | 2.041 | 0.00100 | 0.04998 | |
| RegenerationR4 | 1.926 | 2.041 | 0.05341 | 0.37125 | |
| RegenerationR5 | -0.302 | 2.041 | 0.72713 | 0.96197 | |
| RegenerationR6 | 6.548 | 2.041 | 0.00001 | 0.00247 | Specific for R6: 6.548 |
| RegenerationBL | 3.836 | 2.041 | 0.00546 | 0.06969 | |
| RegenerationTP | 2.898 | 2.041 | 0.07260 | 0.43155 |
Genes with expression patterns similar to MligTC455_52203
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52203 | 111 | 2.31 | Mlig455_017324, Mlig455_029112, Mlig455_048914 | Neo: - Age: - Region-enriched R2: 4.189/0.01995 Regeneration-upregulated R6: 6.548 Regeneration-enriched R6: 6.548 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017324 {REF} {Length: 2300} {NoTransDecoderORF} {RNA1509_56959} {RNA1310_12656} {RNA815_27954} Mlig455_029112 {REF} {Length: 478} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_27954} Mlig455_048914 {REF} {Length: 899} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_32537} |
|
| 2. | MligTC455_39631 | 51 | 1.06 | Mlig455_013952 | Neo: - Age: Up-Down-Down Region-enriched R2: 4.442/0.04477 |
APBA1 | 1.745 | - | 0.968 | - | 0.777 | - | - | Mlig455_013952 {REF} {Length: 5620} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=122.7]; PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=50.5]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=478, Expect=3e-157]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=474, Expect=3e-161]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=477, Expect=2e-158]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=476, Expect=9e-157]} {Dmel: FBgn0052677, X11Lbeta, [Score=533, Expect=2e-168]} {Celegans: WBGene00002999, lin-10, [Score=520, Expect=1e-172]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=551, Expect=0.0]} {RNA1509_55204} {RNA1310_18864.1, RNA1509_55204} {RNA1509_55204, RNA815_11653} |
| 3. | MligTC455_41043 | 18 | 0.38 | Mlig455_009339, Mlig455_053563 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_009339 {REF} {Length: 1411} {NoTransDecoderORF} {RNA1310_4582.1} {RNA815_12775} Mlig455_053563 {REF} {Length: 699} {NoTransDecoderORF} {RNA1310_4582.1} {RNA815_12775} |
|
| 4. | MligTC455_32996 | 35 | 0.73 | Mlig455_039006 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_039006 {REF} {Length: 1342} {RNA1509_43135} {RNA1310_50569} {RNA815_3411} | |
| 5. | MligTC455_33925 | 519 | 10.82 | Mlig455_020716, Mlig455_020784 | Neo: - Age: Down-Down-Up Region-enriched R8: 6.564/0.00000 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_020716 {REF} {Length: 1635} {Pfam: Amastin surface glycoprotein [PF07344.13, score=21.1]} {RNA1310_25321} {RNA815_36976} Mlig455_020784 {REF} {Length: 2274} {Pfam: Amastin surface glycoprotein [PF07344.13, score=22.1]} {RNA1310_25321} {RNA815_36976} |
|
| 6. | MligTC455_11212 | 66 | 1.38 | Mlig455_069909 | Neo: - Age: - Region-enriched R4: 4.111/0.02748 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_069909 {REF} {Length: 1945} {NoTransDecoderORF} {RNA1509_9725} {RNA1310_56853} {RNA815_29618} |