TomoSeq data search

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Results for MligTC455_39631

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39631	51	1.06	Mlig455_013952	Neo: - Age: Up-Down-Down Region-enriched R2: 4.442/0.04477	APBA1	Mlig455_013952 {REF} {Length: 5620} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=122.7]; PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=50.5]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=478, Expect=3e-157]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=474, Expect=3e-161]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=477, Expect=2e-158]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=476, Expect=9e-157]} {Dmel: FBgn0052677, X11Lbeta, [Score=533, Expect=2e-168]} {Celegans: WBGene00002999, lin-10, [Score=520, Expect=1e-172]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=551, Expect=0.0]} {RNA1509_55204} {RNA1310_18864.1, RNA1509_55204} {RNA1509_55204, RNA815_11653}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39631

1.06

Mlig455_013952

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.442/0.04477

APBA1

Mlig455_013952 {REF} {Length: 5620} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=122.7]; PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=50.5]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=478, Expect=3e-157]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=474, Expect=3e-161]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=477, Expect=2e-158]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=476, Expect=9e-157]} {Dmel: FBgn0052677, X11Lbeta, [Score=533, Expect=2e-168]} {Celegans: WBGene00002999, lin-10, [Score=520, Expect=1e-172]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=551, Expect=0.0]} {RNA1509_55204} {RNA1310_18864.1, RNA1509_55204} {RNA1509_55204, RNA815_11653}

Cumulative graph for MligTC455_39631

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.017	1.203	0.99980	1.00000
RegionR2	4.442	1.203	0.00287	0.04477
RegionR3	2.241	1.203	0.10830	0.57330
RegionR4	-0.048	1.203	0.75196	1.00000
RegionR5	-0.146	1.203	0.79881	1.00000
RegionR6	0.439	1.203	0.66805	1.00000
RegionR7	-2.611	1.203	0.99988	1.00000
RegionR8	1.7	1.203	0.43110	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.5	1.203	0.99995	1.00000
RegenerationR2	-1.474	1.203	0.09726	0.49528
RegenerationR3	-0.499	1.203	0.68348	0.94143
RegenerationR4	0.279	1.203	0.81342	0.99062
RegenerationR5	1.715	1.203	0.12740	0.53166
RegenerationR6	2.031	1.203	0.13957	0.45793
RegenerationBL	2.519	1.203	0.12157	0.41330
RegenerationTP	-1.735	1.203	0.99965	1.00000

Genes with expression patterns similar to MligTC455_39631

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39631	51	1.06	Mlig455_013952	Neo: - Age: Up-Down-Down Region-enriched R2: 4.442/0.04477	APBA1	5	1.000	1.000	1.000	1.000	1.000	-	Mlig455_013952 {REF} {Length: 5620} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=122.7]; PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=50.5]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=478, Expect=3e-157]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=475, Expect=2e-157]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=474, Expect=3e-161]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=477, Expect=2e-158]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=476, Expect=9e-157]} {Dmel: FBgn0052677, X11Lbeta, [Score=533, Expect=2e-168]} {Celegans: WBGene00002999, lin-10, [Score=520, Expect=1e-172]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=551, Expect=0.0]} {RNA1509_55204} {RNA1310_18864.1, RNA1509_55204} {RNA1509_55204, RNA815_11653}
2.	MligTC455_52203	111	2.31	Mlig455_017324, Mlig455_029112, Mlig455_048914	Neo: - Age: - Region-enriched R2: 4.189/0.01995 Region-enriched R5: 2.524/0.04937 Regeneration-upregulated R6: 6.548 Regeneration-enriched R6: 6.548		1.745	-	0.968	-	0.777	-	-	Mlig455_017324 {REF} {Length: 2300} {NoTransDecoderORF} {RNA1509_56959} {RNA1310_12656} {RNA815_27954} Mlig455_029112 {REF} {Length: 478} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_27954} Mlig455_048914 {REF} {Length: 899} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=18.9]} {RNA1509_2689} {RNA1310_214.1} {RNA815_32537}
3.	MligTC455_45862	69	1.44	Mlig455_034443, Mlig455_066209	Neo: - Age: - Region-enriched R2: 6.793/0.00003		1.708	0.755	0.953	-	-	-	-	Mlig455_034443 {REF} {Length: 1138} {RNA1310_86023} Mlig455_066209 {REF} {Length: 1301} {RNA1310_86023}
4.	MligTC455_43866	19	0.4	Mlig455_043501	Neo: - Age: -		0.994	-	-	-	0.994	-	-	Mlig455_043501 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_28510} {RNA1310_44786} {RNA815_33478}
5.	MligTC455_08651	18	0.38	Mlig455_039954	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_039954 {REF} {Length: 1358} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_36827} {RNA815_34017}
6.	MligTC455_18241	79	1.65	Mlig455_046687	Neo: - Age: logFC(26M/2M)=-0.444		0.965	-	-	0.965	-	-	-	Mlig455_046687 {REF} {Length: 2271} {RNA1509_43208} {RNA1310_24980} {RNA815_10956}
7.	MligTC455_13820	10	0.21	Mlig455_030340	Neo: - Age: logFC(26M/2M)=-0.872		0.963	-	-	-	0.963	-	-	Mlig455_030340 {REF} {Length: 486} {NoTransDecoderORF} {RNA1310_26756} {RNA815_28619}
8.	MligTC455_21753	67	1.39	Mlig455_023195, Mlig455_025831	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_023195 {REF} {Length: 660} {NoTransDecoderORF} {RNA1310_73607.2} {RNA815_19357} Mlig455_025831 {REF} {Length: 410} {NoTransDecoderORF} {RNA1310_98124} {RNA815_19357}
9.	MligTC455_17877	64	1.33	Mlig455_048239	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_048239 {REF} {Length: 469} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36834} {RNA1310_25226.1} {RNA815_34505}
10.	MligTC455_45581	49	1.03	Mlig455_045128, Mlig455_045162	Neo: - Age: Down-Down-Up Region-enriched R7: 4.346/0.00514		0.954	-	-	-	0.954	-	-	Mlig455_045128 {REF} {Length: 2950} {RNA1509_29, RNA1509_3187} {RNA1310_4199.2, RNA1509_3187} {RNA1509_3187, RNA815_8541.1} Mlig455_045162 {REF} {Length: 620} {NoTransDecoderORF} {RNA1509_10639} {RNA1310_4199.2} {RNA815_24585}
11.	MligTC455_35491	225	4.68	Mlig455_063578	Neo: - Age: Down-Up-Down		0.953	-	-	0.953	-	-	-	Mlig455_063578 {REF} {Length: 545} {NoTransDecoderORF} {RNA1509_54251} {RNA1310_4240.1} {RNA815_4868}