TomoSeq data search

Data search

Results for MligTC455_52400

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52400

1082

22.55

Mlig455_011305, Mlig455_022486, Mlig455_038582, Mlig455_056863, Mlig455_057049, Mlig455_057669, Mlig455_061128

Neo: -

Age: Down-Up-Down

Mlig455_011305 {REF} {Length: 652} {RNA1509_14690} {RNA1310_66185} {RNA815_31052}

Mlig455_022486 {REF} {Length: 1105} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373}

Mlig455_038582 {REF} {Length: 935} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373}

Mlig455_056863 {REF} {Length: 1065} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373}

Mlig455_057049 {REF} {Length: 1487} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373}

Mlig455_057669 {REF} {Length: 326} {NoTransDecoderORF} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373}

Mlig455_061128 {REF} {Length: 2461} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=22.0]} {RNA1509_17097, RNA1509_2910} {RNA1310_27479.2, RNA1509_2910} {RNA1509_2910, RNA815_19373}

Cumulative graph for MligTC455_52400

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.686	4.894	0.59299	1.00000
RegionR2	0.154	4.894	0.81859	1.00000
RegionR3	0.349	4.894	0.50755	0.99745
RegionR4	1.098	4.894	0.08126	0.26763
RegionR5	0.908	4.894	0.05575	0.20243
RegionR6	-0.07	4.894	0.89619	1.00000
RegionR7	0.441	4.894	0.42660	1.00000
RegionR8	-2.193	4.894	0.02212	0.29011

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.837	4.894	0.13380	0.86854
RegenerationR2	-0.237	4.894	0.68193	0.94953
RegenerationR3	-0.153	4.894	0.80720	0.98417
RegenerationR4	-0.973	4.894	0.14192	0.56455
RegenerationR5	-0.147	4.894	0.80721	0.99038
RegenerationR6	-0.098	4.894	0.87626	1.00000
RegenerationBL	-0.673	4.894	0.37084	0.73940
RegenerationTP	1.409	4.894	0.05811	0.39193

Genes with expression patterns similar to MligTC455_52400

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52400	1082	22.55	Mlig455_011305, Mlig455_022486, Mlig455_038582, Mlig455_056863, Mlig455_057049, Mlig455_057669, Mlig455_061128	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011305 {REF} {Length: 652} {RNA1509_14690} {RNA1310_66185} {RNA815_31052} Mlig455_022486 {REF} {Length: 1105} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373} Mlig455_038582 {REF} {Length: 935} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373} Mlig455_056863 {REF} {Length: 1065} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373} Mlig455_057049 {REF} {Length: 1487} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373} Mlig455_057669 {REF} {Length: 326} {NoTransDecoderORF} {RNA1509_17097} {RNA1310_27479.2} {RNA815_19373} Mlig455_061128 {REF} {Length: 2461} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=22.0]} {RNA1509_17097, RNA1509_2910} {RNA1310_27479.2, RNA1509_2910} {RNA1509_2910, RNA815_19373}
2.	MligTC455_52399	129	2.68	Mlig455_028953	Neo: - Age: -	ANK2	4.624	-	0.925	0.911	0.863	0.966	0.959	Mlig455_028953 {REF} {Length: 1003} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=49.3, Expect=2e-06]} {RNA1509_14690} {RNA1310_66185} {RNA815_31052}
3.	MligTC455_39039	274	5.7	Mlig455_026563	Neo: - Age: - Region-enriched R5: 1.645/0.03505	LAMTOR1	1.755	-	-	-	-	0.794	0.961	Mlig455_026563 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=20.2]} {Human: ENSG00000149357, LAMTOR1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=45.4, Expect=9e-06]} {Mouse: ENSMUSG00000030842, Lamtor1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=48.1, Expect=7e-07]} {RNA1509_34492} {RNA1310_43726.1, RNA1509_34492} {RNA1509_34492, RNA815_11657.1}
4.	MligTC455_32753	687	14.31	Mlig455_053740	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.380	SYNRG	0.967	-	-	-	-	-	0.967	Mlig455_053740 {REF} {Length: 4156} {TRANSSPLICED} {Human: ENSG00000274047, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]; ENSG00000275066, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000034940, Synrg, synergin, gamma, [RH, Score=81.3, Expect=5e-15]} {Celegans: WBGene00011218, R10E11.6, [RH, Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_8044_0_1, dd_Smed_v6_8044_0_1, [RH, Score=71.2, Expect=2e-12]} {RNA1509_13094} {RNA1310_2948.1} {RNA815_2849}
5.	MligTC455_18523	377	7.85	Mlig455_041280	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.516	ZNRF2	0.962	-	-	-	-	-	0.962	Mlig455_041280 {REF} {Length: 3365} {Pfam: Ring finger domain [PF13639.8, score=35.5]; RING-like zinc finger [PF17123.7, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]} {Human: ENSG00000180233, ZNRF2, zinc and ring finger 2, [RH, Score=149, Expect=8e-44]; ENSG00000186187, ZNRF1, zinc and ring finger 1, [RH, Score=143, Expect=1e-41]} {Mouse: ENSMUSG00000058446, Znrf2, zinc and ring finger 2, [RH, Score=151, Expect=4e-45]} {Dmel: FBgn0029911, CG14435, [RH, Score=154, Expect=2e-45]} {Celegans: WBGene00022115, Y71F9AL.10, [RH, Score=139, Expect=3e-41]} {Smed: dd_Smed_v6_2436_0_1, dd_Smed_v6_2436_0_1, [RH, Score=134, Expect=7e-39]} {RNA1509_22680} {RNA1310_29925} {RNA815_18349}
6.	MligTC455_41778	3129	65.2	Mlig455_001612	Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.583 Region-enriched R5: 1.234/0.00079	DKC1	0.952	0.952	-	-	-	-	-	Mlig455_001612 {REF} {Length: 1975} {TRANSSPLICED} {Pfam: tRNA pseudouridylate synthase B C-terminal domain [PF16198.7, score=71.2]; PUA domain [PF01472.22, score=70.9]; TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=63.0]} {Human: ENSG00000130826, DKC1, dyskerin pseudouridine synthase 1, [Score=454, Expect=1e-157]} {Mouse: ENSMUSG00000031403, Dkc1, dyskeratosis congenita 1, dyskerin, [Score=451, Expect=2e-156]} {Dmel: FBgn0259937, Nop60B, Nucleolar protein at 60B, [Score=481, Expect=1e-168]} {Celegans: WBGene00010478, K01G5.5, Putative H/ACA ribonucleoprotein complex subunit 4, [Score=435, Expect=2e-151]} {Smed: dd_Smed_v6_4087_0_1, dd_Smed_v6_4087_0_1, [Score=374, Expect=5e-128]} {RNA1509_2479, RNA1509_40144} {RNA1310_14344.1, RNA1509_40144} {RNA1509_40144, RNA815_5205}

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