M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52472

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52472 211 4.40 Mlig455_063702

Neo: -

Age: logFC(26M/2M)=-0.515

 Mlig455_063702 {REF} {Length: 1390} {RNA1509_56031} {RNA1310_30859} {RNA815_19803}

Cumulative graph for MligTC455_52472

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.608 2.817 0.35207 0.99536
RegionR2 1.59 2.817 0.09206 0.37220
RegionR3 1.644 2.817 0.03273 0.31263
RegionR4 1.738 2.817 0.06432 0.22852
RegionR5 0.437 2.817 0.63210 0.98531
RegionR6 0.929 2.817 0.32638 0.91422
RegionR7 -1.3 2.817 0.99448 1.00000
RegionR8 -0.431 2.817 0.94981 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.164 2.817 1.00000 1.00000
RegenerationR2 0.626 2.817 0.18225 0.62564
RegenerationR3 0.442 2.817 0.44508 0.82985
RegenerationR4 -0.117 2.817 0.85637 1.00000
RegenerationR5 0.531 2.817 0.37088 0.78078
RegenerationR6 -0.129 2.817 0.84663 0.99856
RegenerationBL 0.917 2.817 0.37562 0.74409
RegenerationTP 2.54 2.817 0.01146 0.18198


Genes with expression patterns similar to MligTC455_52472

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52472 211 4.4 Mlig455_063702

Neo: -

Age: logFC(26M/2M)=-0.515

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_063702 {REF} {Length: 1390} {RNA1509_56031} {RNA1310_30859} {RNA815_19803}
2. MligTC455_18961 290 6.05 Mlig455_027918

Neo: -

Age: -

 1.806 - - - 0.854 - 0.952 Mlig455_027918 {REF} {Length: 1269} {RNA1509_18336} {RNA1310_16542.2} {RNA815_28056}
3. MligTC455_32111 620 12.92 Mlig455_027304

Neo: -

Age: logFC(26M/2M)=-0.296

 SYT14 1.795 - - - 0.841 - 0.954 Mlig455_027304 {REF} {Length: 3221} {Pfam: C2 domain [PF00168.32, score=65.3]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [RH, Score=231, Expect=2e-67]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [RH, Score=229, Expect=2e-64]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [RH, Score=218, Expect=4e-62]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=73.2, Expect=2e-13]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [RH, Score=177, Expect=2e-49]} {RNA1509_11231} {RNA1310_10515.1} {RNA815_5645}
4. MligTC455_15671 88 1.84 Mlig455_059458

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.370

Region-enriched R4: 4.705/0.00509

 KIAA0895L 1.791 - - 0.962 - - 0.829 Mlig455_059458 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1704) [PF08014.13, score=37.3]} {Human: ENSG00000196123, KIAA0895L, KIAA0895 like, [RH, Score=151, Expect=4e-40]; ENSG00000164542, KIAA0895, KIAA0895, [RH, Score=150, Expect=1e-39]} {Mouse: ENSMUSG00000014837, 4931428F04Rik, RIKEN cDNA 4931428F04 gene, [RH, Score=156, Expect=4e-42]} {Smed: dd_Smed_v6_103892_0_1, dd_Smed_v6_103892_0_1, [RH, Score=98.6, Expect=3e-25]} {RNA1509_47713, RNA1509_49841} {RNA1310_17536.1, RNA1509_47713, RNA1509_49841} {RNA1509_47713, RNA1509_49841, RNA815_7463.1}
5. MligTC455_16743 4336 90.32 Mlig455_014160, Mlig455_014169

Neo: -

Age: logFC(26M/2M)=-0.380

 C2orf50 1.779 - - - 0.822 - 0.957

Mlig455_014160 {REF} {Length: 868} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=30.4]} {Human: ENSG00000150873, C2orf50, chromosome 2 open reading frame 50, [RH, Score=73.2, Expect=1e-16]} {Mouse: ENSMUSG00000071398, 2410004P03Rik, RIKEN cDNA 2410004P03 gene, [RH, Score=79.0, Expect=4e-19]} {Smed: dd_Smed_v6_6024_0_1, dd_Smed_v6_6024_0_1, [RH, Score=115, Expect=6e-34]} {RNA1509_4568} {RNA1310_56366} {RNA815_28077}

Mlig455_014169 {REF} {Length: 879} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=31.6]} {Human: ENSG00000150873, C2orf50, chromosome 2 open reading frame 50, [Score=53.9, Expect=1e-09]} {Mouse: ENSMUSG00000071398, 2410004P03Rik, RIKEN cDNA 2410004P03 gene, [Score=54.7, Expect=2e-10]} {Smed: dd_Smed_v6_6024_0_1, dd_Smed_v6_6024_0_1, [Score=81.3, Expect=9e-21]} {RNA1509_4568} {RNA1310_56366, RNA1509_4568} {RNA1509_4568, RNA815_28077}
6. MligTC455_43906 878 18.29 Mlig455_044333, Mlig455_044345

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.277

 RAI14 1.778 - - 0.827 - - 0.951

Mlig455_044333 {REF} {Length: 5825} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=81.1]; Ankyrin repeat [PF00023.32, score=72.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeat [PF13606.8, score=48.5]; Ankyrin repeats (many copies) [PF13857.8, score=44.2]} {Human: ENSG00000039560, RAI14, retinoic acid induced 14, [Score=90.1, Expect=3e-17]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=94.4, Expect=9e-19]; ENSMUSG00000007827, Ankrd26, ankyrin repeat domain 26, [Score=89.7, Expect=3e-17]} {Dmel: FBgn0039590, CG10011, [Score=82.4, Expect=4e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=85.9, Expect=3e-16]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=73.9, Expect=7e-13]} {RNA1509_7603} {RNA1310_960.3} {RNA815_5173}

Mlig455_044345 {REF} {Length: 6035} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=87.7]; Ankyrin repeat [PF00023.32, score=72.9]; Ankyrin repeats (many copies) [PF13637.8, score=66.8]; Ankyrin repeats (many copies) [PF13857.8, score=50.5]; Ankyrin repeat [PF13606.8, score=50.0]} {Human: ENSG00000039560, RAI14, retinoic acid induced 14, [Score=94.7, Expect=9e-19]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=92.0, Expect=6e-19]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=99.4, Expect=3e-20]} {Dmel: FBgn0039590, CG10011, [Score=87.4, Expect=1e-16]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=86.3, Expect=2e-16]} {Smed: dd_Smed_v6_7952_0_2, dd_Smed_v6_7952_0_2, [Score=80.5, Expect=8e-15]} {RNA1509_7603} {RNA1310_960.3} {RNA815_5173}
7. MligTC455_42733 190 3.96 Mlig455_060196

Neo: -

Age: logFC(26M/2M)=-0.623

 SLC22A7 1.764 - - 0.950 - - 0.814 Mlig455_060196 {REF} {Length: 2722} {Pfam: Sugar (and other) transporter [PF00083.26, score=94.3]; Major Facilitator Superfamily [PF07690.18, score=70.1]} {Human: ENSG00000137204, SLC22A7, solute carrier family 22 member 7, [Score=125, Expect=3e-30]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=124, Expect=7e-30]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=121, Expect=3e-29]} {Dmel: FBgn0034479, CG8654, [Score=115, Expect=2e-27]} {Celegans: WBGene00019408, K05F1.6, [Score=71.6, Expect=5e-13]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=87.8, Expect=2e-18]} {RNA1509_11814} {RNA1310_15619.1} {RNA815_5783.2}
8. MligTC455_43293 2619 54.57 Mlig455_001393

Neo: -

Age: -

Region-specific R2: 1.579

 ANXA7 1.757 - - 0.968 - - 0.789 Mlig455_001393 {REF} {Length: 4698} {Pfam: Annexin [PF00191.22, score=268.6]} {Human: ENSG00000138279, ANXA7, annexin A7, [RH, Score=307, Expect=6e-98]} {Mouse: ENSMUSG00000021814, Anxa7, annexin A7, [RH, Score=301, Expect=8e-96]} {Dmel: FBgn0000083, AnxB9, Annexin B9, [Score=259, Expect=4e-82]} {Celegans: WBGene00003589, nex-2, Annexin, [Score=261, Expect=2e-81]} {Smed: dd_Smed_v6_1735_0_1, dd_Smed_v6_1735_0_1, [Score=270, Expect=6e-86]} {RNA1509_5239} {RNA1310_11340, RNA1509_5239} {RNA1509_5239, RNA815_3977}
9. MligTC455_39099 2631 54.81 Mlig455_057941, Mlig455_057974, Mlig455_070742

Neo: -

Age: logFC(26M/2M)=-0.384

Region-enriched R4: 1.433/0.02316

 SLIT3 1.736 - - - - 0.768 0.968

Mlig455_057941 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323}

Mlig455_057974 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323}

Mlig455_070742 {REF} {Length: 4437} {Pfam: Leucine rich repeat [PF13855.8, score=54.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.6]; Leucine Rich Repeat [PF00560.35, score=21.4]; Leucine-rich repeat [PF14580.8, score=19.3]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.4, Expect=2e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.5, Expect=6e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=64.3, Expect=3e-10]; ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=61.2, Expect=3e-09]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=4e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=116, Expect=1e-27]} {RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1310_9830, RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1509_17236, RNA1509_20558, RNA1509_8042, RNA815_3323}
10. MligTC455_29771 742 15.47 Mlig455_013624, Mlig455_037980, Mlig455_038930, Mlig455_061382, Mlig455_061404

Neo: -

Age: logFC(26M/2M)=-0.311

 MAP3K19 1.713 - - 0.728 - - 0.985

Mlig455_013624 {REF} {Length: 1098} {RNA1509_53099} {RNA1310_47210.1} {RNA815_24422.1}

Mlig455_037980 {REF} {Length: 117} {NoTransDecoderORF} {RNA1509_30278} {RNA1310_95865} {RNA815_24422.1}

Mlig455_038930 {REF} {Length: 3221} {Pfam: Protein kinase domain [PF00069.27, score=190.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.1]; Ankyrin repeats (many copies) [PF13637.8, score=41.9]; Ankyrin repeats (3 copies) [PF12796.9, score=37.0]; Ankyrin repeats (many copies) [PF13857.8, score=28.9]; ABC1 atypical kinase-like domain [PF03109.18, score=25.3]; Fungal protein kinase [PF17667.3, score=24.5]; Ankyrin repeat [PF13606.8, score=19.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=161, Expect=7e-43]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=160, Expect=1e-42]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=137, Expect=3e-34]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=130, Expect=9e-32]} {Smed: dd_Smed_v6_2030_0_15, dd_Smed_v6_2030_0_15, [Score=140, Expect=2e-36]} {RNA1509_45037} {RNA1310_17852.1} {RNA815_5323.2}

Mlig455_061382 {REF} {Length: 1696} {Pfam: Protein kinase domain [PF00069.27, score=108.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.4]; Ternary complex associated domain 9 [PF19974.1, score=21.1]; Fungal protein kinase [PF17667.3, score=20.3]; Integrase core domain [PF13683.8, score=18.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=113, Expect=1e-27]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=110, Expect=3e-26]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=107, Expect=3e-25]; ENSMUSG00000031112, Stk26, serine/threonine kinase 26, [Score=105, Expect=2e-25]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=109, Expect=2e-26]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [Score=97.8, Expect=2e-22]} {Smed: dd_Smed_v6_1953_0_1, dd_Smed_v6_1953_0_1, [Score=103, Expect=8e-25]} {RNA1509_48626} {RNA1310_17852.1} {RNA815_5323.2}

Mlig455_061404 {REF} {Length: 2975} {Pfam: Protein kinase domain [PF00069.27, score=179.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeats (many copies) [PF13637.8, score=106.4]; Ankyrin repeats (3 copies) [PF12796.9, score=90.0]; Ankyrin repeats (many copies) [PF13857.8, score=68.8]; Ankyrin repeat [PF13606.8, score=48.4]; Ankyrin repeat [PF00023.32, score=38.0]; Fungal protein kinase [PF17667.3, score=26.3]; ABC1 atypical kinase-like domain [PF03109.18, score=22.9]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=150, Expect=2e-38]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=145, Expect=2e-35]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=150, Expect=1e-38]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=128, Expect=1e-30]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=121, Expect=1e-28]} {Smed: dd_Smed_v6_2030_0_9, dd_Smed_v6_2030_0_9, [Score=132, Expect=3e-33]} {RNA1509_34593} {RNA1310_22200.1} {RNA815_5323.4}
11. MligTC455_28989 92 1.92 Mlig455_016760

Neo: -

Age: Up-Down-Down

 1.683 - - 0.971 - - 0.712 Mlig455_016760 {REF} {Length: 2689} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59281} {RNA1310_51359} {RNA815_16150.1}
12. MligTC455_18546 418 8.7 Mlig455_044183

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.317

 FADS2 1.677 - - 0.726 - - 0.951 Mlig455_044183 {REF} {Length: 2950} {Pfam: Fatty acid desaturase [PF00487.26, score=112.5]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=37.6]} {Human: ENSG00000134824, FADS2, fatty acid desaturase 2, [Score=117, Expect=3e-28]; ENSG00000221968, FADS3, fatty acid desaturase 3, [Score=114, Expect=6e-27]} {Mouse: ENSMUSG00000024664, Fads3, fatty acid desaturase 3, [Score=119, Expect=5e-29]} {Celegans: WBGene00001395, fat-3, Delta(6)-fatty-acid desaturase fat-3, [Score=131, Expect=2e-33]} {Smed: dd_Smed_v6_10869_0_1, dd_Smed_v6_10869_0_1, [Score=94.0, Expect=9e-21]} {RNA1509_52879} {RNA1310_16890} {RNA815_2888}
13. MligTC455_53809 608 12.67 Mlig455_063377

Neo: -

Age: logFC(26M/2M)=-0.339

 HUNK 1.675 - - 0.953 - - 0.722 Mlig455_063377 {REF} {Length: 4517} {Pfam: Protein kinase domain [PF00069.27, score=241.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=147.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.3]; Kinase-like [PF14531.8, score=24.3]; RIO1 family [PF01163.24, score=19.0]; Haspin like kinase domain [PF12330.10, score=18.0]} {Human: ENSG00000142149, HUNK, hormonally up-regulated Neu-associated kinase, [RH, Score=382, Expect=1e-120]} {Mouse: ENSMUSG00000053414, Hunk, hormonally upregulated Neu-associated kinase, [RH, Score=385, Expect=1e-121]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=218, Expect=4e-61]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=226, Expect=2e-61]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=223, Expect=1e-63]} {RNA1509_10302, RNA1509_25913} {RNA1310_5970, RNA1509_10302, RNA1509_25913} {RNA1509_10302, RNA1509_25913, RNA815_9514}
14. MligTC455_27997 402 8.37 Mlig455_057028, Mlig455_057036

Neo: -

Age: -

Region-enriched R2: 3.762/0.00007

 HK2 0.974 - - 0.974 - - -

Mlig455_057028 {REF} {Length: 3324} {TRANSSPLICED} {Pfam: Hexokinase [PF03727.18, score=261.4]; Hexokinase [PF00349.23, score=174.5]} {Human: ENSG00000159399, HK2, hexokinase 2, [Score=321, Expect=1e-99]; ENSG00000156515, HK1, hexokinase 1, [Score=314, Expect=6e-97]; ENSG00000156510, HKDC1, hexokinase domain containing 1, [Score=312, Expect=2e-96]; ENSG00000160883, HK3, hexokinase 3, [Score=311, Expect=7e-96]} {Mouse: ENSMUSG00000037012, Hk1, hexokinase 1, [Score=321, Expect=9e-100]; ENSMUSG00000000628, Hk2, hexokinase 2, [Score=318, Expect=9e-99]; ENSMUSG00000020080, Hkdc1, hexokinase domain containing 1, [Score=309, Expect=4e-95]; ENSMUSG00000025877, Hk3, hexokinase 3, [Score=309, Expect=1e-95]} {Dmel: FBgn0001186, Hex-A, Hexokinase A, [RH, Score=352, Expect=1e-115]} {Celegans: WBGene00008780, hxk-1, Phosphotransferase, [Score=341, Expect=3e-112]} {Smed: dd_Smed_v6_4327_0_1, dd_Smed_v6_4327_0_1, [Score=442, Expect=1e-152]} {RNA1509_24721, RNA1509_48688, RNA1509_52831} {RNA1310_7926.3, RNA1509_24721, RNA1509_48688, RNA1509_52831} {RNA1509_24721, RNA1509_48688, RNA1509_52831, RNA815_2880}

Mlig455_057036 {REF} {Length: 3501} {TRANSSPLICED} {Pfam: Hexokinase [PF03727.18, score=261.4]; Hexokinase [PF00349.23, score=174.5]} {Human: ENSG00000159399, HK2, hexokinase 2, [Score=321, Expect=1e-99]; ENSG00000156515, HK1, hexokinase 1, [Score=314, Expect=6e-97]; ENSG00000156510, HKDC1, hexokinase domain containing 1, [Score=312, Expect=2e-96]; ENSG00000160883, HK3, hexokinase 3, [Score=311, Expect=7e-96]} {Mouse: ENSMUSG00000037012, Hk1, hexokinase 1, [Score=321, Expect=9e-100]; ENSMUSG00000000628, Hk2, hexokinase 2, [Score=318, Expect=9e-99]; ENSMUSG00000020080, Hkdc1, hexokinase domain containing 1, [Score=309, Expect=4e-95]; ENSMUSG00000025877, Hk3, hexokinase 3, [Score=309, Expect=1e-95]} {Dmel: FBgn0001186, Hex-A, Hexokinase A, [RH, Score=352, Expect=1e-115]} {Celegans: WBGene00008780, hxk-1, Phosphotransferase, [Score=341, Expect=3e-112]} {Smed: dd_Smed_v6_4327_0_1, dd_Smed_v6_4327_0_1, [Score=442, Expect=1e-152]} {RNA1509_42767} {RNA1310_7926.2, RNA1509_42767} {RNA1509_42767, RNA815_2880}
15. MligTC455_25780 86 1.79 Mlig455_024288

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_024288 {REF} {Length: 1124} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.1} {RNA815_10226}
16. MligTC455_27054 1268 26.42 Mlig455_010518, Mlig455_061853

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.418

Region-enriched R8: 2.038/0.00265

 EML2 0.971 - - - - - 0.971

Mlig455_010518 {REF} {Length: 3768} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=41.6]; Doublecortin [PF03607.19, score=40.3]; HELP motif [PF03451.16, score=33.6]; WD domain, G-beta repeat [PF00400.34, score=30.9]; PQQ-like domain [PF13360.8, score=20.8]} {Human: ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=285, Expect=5e-82]; ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=276, Expect=7e-79]} {Mouse: ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=290, Expect=7e-84]; ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=285, Expect=5e-82]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=312, Expect=4e-92]} {Smed: dd_Smed_v6_21299_0_4, dd_Smed_v6_21299_0_4, [Score=253, Expect=7e-73]} {RNA1509_17153} {RNA1310_1430.1} {RNA815_690.1}

Mlig455_061853 {REF} {Length: 4069} {Pfam: Doublecortin [PF03607.19, score=48.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.7]; HELP motif [PF03451.16, score=32.3]; WD domain, G-beta repeat [PF00400.34, score=29.2]} {Human: ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=283, Expect=5e-81]; ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=276, Expect=1e-78]} {Mouse: ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=288, Expect=7e-83]; ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=284, Expect=1e-81]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=310, Expect=1e-90]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=60.1, Expect=8e-09]} {Smed: dd_Smed_v6_958_0_1, dd_Smed_v6_958_0_1, [Score=251, Expect=1e-70]} {RNA1509_17153} {RNA1310_1430.1, RNA1509_17153} {RNA1509_17153, RNA815_690.1}
17. MligTC455_44652 28 0.58 Mlig455_024211

Neo: -

Age: -

Region-enriched R2: 6.750/0.00858

Regeneration-downregulated R2: -6.764

Regeneration-depleted R2: -6.764

 NPFFR2 0.966 - - 0.966 - - - Mlig455_024211 {REF} {Length: 2684} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=160.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.7]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=155, Expect=2e-42]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=152, Expect=2e-41]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=145, Expect=1e-38]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [Score=188, Expect=1e-52]} {Celegans: WBGene00016842, npr-35, NeuroPeptide Receptor family, [Score=124, Expect=1e-31]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=218, Expect=3e-67]} {RNA1310_39672}
18. MligTC455_27804 67 1.39 Mlig455_000284

Neo: -

Age: -

 PRKACA 0.961 - - 0.961 - - - Mlig455_000284 {REF} {Length: 4598} {Pfam: Protein kinase domain [PF00069.27, score=134.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=61.6]} {Human: ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [Score=268, Expect=2e-89]; ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [Score=267, Expect=4e-90]} {Mouse: ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [Score=271, Expect=1e-90]; ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [Score=261, Expect=1e-86]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [Score=275, Expect=4e-92]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [Score=276, Expect=6e-93]} {Smed: dd_Smed_v6_2413_0_2, dd_Smed_v6_2413_0_2, [Score=305, Expect=2e-104]} {RNA1509_14877} {RNA1310_22681.1} {RNA815_5959.1}
19. MligTC455_34951 179 3.73 Mlig455_055449

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.873/0.00779

 RIMS1 0.961 - - - - - 0.961 Mlig455_055449 {REF} {Length: 5007} {Pfam: C2 domain [PF00168.32, score=104.1]; PDZ domain [PF17820.3, score=39.8]; PDZ domain [PF00595.26, score=32.1]; PDZ domain [PF13180.8, score=23.8]; Piccolo Zn-finger [PF05715.15, score=20.6]} {Human: ENSG00000079841, RIMS1, regulating synaptic membrane exocytosis 1, [RH, Score=226, Expect=2e-59]; ENSG00000176406, RIMS2, regulating synaptic membrane exocytosis 2, [RH, Score=223, Expect=1e-58]} {Mouse: ENSMUSG00000111628, Rims1, regulating synaptic membrane exocytosis 1, [RH, Score=217, Expect=8e-64]; ENSMUSG00000037386, Rims2, regulating synaptic membrane exocytosis 2, [RH, Score=217, Expect=4e-63]; ENSMUSG00000041670, Rims1, regulating synaptic membrane exocytosis 1, [RH, Score=217, Expect=8e-64]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [RH, Score=236, Expect=1e-62]} {Celegans: WBGene00006750, unc-10, Rab-3-interacting molecule unc-10, [RH, Score=186, Expect=2e-47]} {Smed: dd_Smed_v6_10734_0_1, dd_Smed_v6_10734_0_1, [Score=245, Expect=2e-67]} {RNA1509_26372} {RNA1310_18417} {RNA815_9566}
20. MligTC455_40020 7894 164.45 Mlig455_008800

Neo: -

Age: -

 ODF3 0.961 - - 0.961 - - - Mlig455_008800 {REF} {Length: 1876} {TRANSSPLICED} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=67.2]} {Human: ENSG00000177947, ODF3, outer dense fiber of sperm tails 3, [RH, Score=186, Expect=4e-58]} {Mouse: ENSMUSG00000025482, Odf3, outer dense fiber of sperm tails 3, [RH, Score=181, Expect=3e-56]} {Dmel: FBgn0032010, CG8086, [RH, Score=119, Expect=3e-32]} {Smed: dd_Smed_v6_2658_0_1, dd_Smed_v6_2658_0_1, [RH, Score=331, Expect=1e-115]} {RNA1509_24509, RNA1509_25204, RNA1509_33091, RNA1509_587} {RNA1310_15447.1, RNA1509_24509, RNA1509_25204, RNA1509_33091, RNA1509_587} {RNA1509_24509, RNA1509_25204, RNA1509_33091, RNA1509_587, RNA815_2683.1}
21. MligTC455_40374 221 4.6 Mlig455_066549

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 2.403/0.02828

 C5orf22 0.961 - - - - 0.961 - Mlig455_066549 {REF} {Length: 1383} {TRANSSPLICED} {Pfam: UPF0489 domain [PF12640.9, score=115.1]} {Human: ENSG00000082213, C5orf22, chromosome 5 open reading frame 22, [RH, Score=125, Expect=2e-31]} {Mouse: ENSMUSG00000022195, 6030458C11Rik, RIKEN cDNA 6030458C11 gene, [RH, Score=129, Expect=6e-33]} {Dmel: FBgn0036846, MESR6, Misexpression suppressor of ras 6, [RH, Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_4655_0_1, dd_Smed_v6_4655_0_1, [RH, Score=95.9, Expect=3e-21]} {RNA1509_8329} {RNA1310_22859} {RNA815_7948}
22. MligTC455_30220 372 7.74 Mlig455_060458

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.463

 ANK1 0.96 - - - - - 0.960 Mlig455_060458 {REF} {Length: 9800} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=273.7]; Ankyrin repeat [PF00023.32, score=203.0]; Ankyrin repeats (many copies) [PF13637.8, score=198.8]; Ankyrin repeat [PF13606.8, score=164.5]; Ankyrin repeats (many copies) [PF13857.8, score=156.0]; Mab-21 protein [PF03281.16, score=31.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=232, Expect=1e-61]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=226, Expect=8e-60]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=227, Expect=3e-60]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=219, Expect=2e-57]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=206, Expect=2e-56]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=212, Expect=1e-55]} {Smed: dd_Smed_v6_2072_0_24, dd_Smed_v6_2072_0_24, [Score=207, Expect=2e-54]} {RNA1509_15674, RNA1509_26240, RNA1509_58464} {RNA1310_2797, RNA1509_15674, RNA1509_26240, RNA1509_58464} {RNA1509_15674, RNA1509_26240, RNA1509_58464, RNA815_10573}
23. MligTC455_31891 52 1.08 Mlig455_062869

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.362

 0.959 - - 0.959 - - - Mlig455_062869 {REF} {Length: 1033} {TRANSSPLICED} {RNA1509_11073} {RNA1310_6149} {RNA815_1772.1}
24. MligTC455_50935 553 11.53 Mlig455_037656, Mlig455_037661, Mlig455_037766

Neo: -

Age: Down-Up-Up

 0.959 - - - - - 0.959

Mlig455_037656 {REF} {Length: 2489} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.9]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_12261, RNA1509_57275} {RNA1310_8718.2, RNA1509_12261, RNA1509_57275} {RNA1509_12261, RNA1509_57275, RNA815_16423}

Mlig455_037661 {REF} {Length: 2450} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=151.7]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_12261} {RNA1310_8718.2} {RNA815_16423}

Mlig455_037766 {REF} {Length: 2439} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.9]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_12261} {RNA1310_8718.2} {RNA815_16423}
25. MligTC455_53960 381 7.93 Mlig455_039523

Neo: -

Age: logFC(26M/2M)=-0.527

Region-enriched R2: 1.863/0.02753

 TTLL7 0.959 - - 0.959 - - - Mlig455_039523 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=44.5]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=146, Expect=5e-37]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=261, Expect=2e-76]} {Dmel: FBgn0039501, CG5987, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=118, Expect=1e-27]} {RNA1509_8901} {RNA1310_4651} {RNA815_1757}
26. MligTC455_27440 207 4.31 Mlig455_050456

Neo: -

Age: -

 DCDC1 0.958 - - 0.958 - - - Mlig455_050456 {REF} {Length: 5764} {Pfam: Cep120 protein [PF12416.10, score=40.9]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=90.1, Expect=9e-18]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=57.8, Expect=3e-08]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282}
27. MligTC455_51236 761 15.85 Mlig455_022790

Neo: -

Age: logFC(26M/2M)=-0.317

Region-enriched R4: 2.121/0.01962

 0.958 - - - - - 0.958 Mlig455_022790 {REF} {Length: 2959} {TRANSSPLICED} {RNA1509_44483, RNA1509_49000, RNA1509_6911} {RNA1310_8893.2, RNA1509_44483, RNA1509_49000, RNA1509_6911} {RNA1509_44483, RNA1509_49000, RNA1509_6911, RNA815_2961.1}
28. MligTC455_14049 376 7.83 Mlig455_049671

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_049671 {REF} {Length: 2740} {Pfam: Ubiquitin family [PF00240.25, score=51.7]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=26.9]} {RNA1509_11983} {RNA1310_7335} {RNA815_858}
29. MligTC455_34792 238 4.96 Mlig455_045574

Neo: -

Age: logFC(26M/2M)=-0.239

 0.955 - - 0.955 - - - Mlig455_045574 {REF} {Length: 4478} {Smed: dd_Smed_v6_27312_0_1, dd_Smed_v6_27312_0_1, [RH, Score=160, Expect=9e-40]} {RNA1509_6675} {RNA1310_2307, RNA1509_6675} {RNA1509_6675, RNA815_650}
30. MligTC455_42503 20 0.41 Mlig455_051969

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_051969 {REF} {Length: 1296} {RNA1509_45595} {RNA1310_54539} {RNA815_44342}
31. MligTC455_38490 38 0.8 Mlig455_028980

Neo: -

Age: Down-Up-Down

 0.953 - - 0.953 - - - Mlig455_028980 {REF} {Length: 3387} {RNA1509_29504} {RNA1310_1629} {RNA815_5687}
32. MligTC455_12601 88 1.84 Mlig455_053883, Mlig455_055408

Neo: -

Age: Down-Up-Up

 0.952 - - 0.952 - - -

Mlig455_053883 {REF} {Length: 409} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_74777.1} {RNA815_45586}

Mlig455_055408 {REF} {Length: 482} {NoTransDecoderORF} {RNA1310_74777.1} {RNA815_45586}
33. MligTC455_38761 71 1.47 Mlig455_019918, Mlig455_047955

Neo: -

Age: -

 0.951 - - 0.951 - - -

Mlig455_019918 {REF} {Length: 1871} {RNA1509_41793} {RNA1310_36132.1} {RNA815_31684}

Mlig455_047955 {REF} {Length: 2537} {RNA1509_40333} {RNA1310_36132.1} {RNA815_31684}
34. MligTC455_31668 78 1.62 Mlig455_050217

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_050217 {REF} {Length: 1466} {RNA1509_36985} {RNA1310_22561} {RNA815_12605}
35. MligTC455_44070 1172 24.41 Mlig455_013674, Mlig455_013682, Mlig455_013691

Neo: -

Age: logFC(26M/2M)=-0.325

 CASKIN1 0.95 - - 0.950 - - -

Mlig455_013674 {REF} {Length: 3260} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=71.4]; SAM domain (Sterile alpha motif) [PF07647.19, score=60.8]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=6e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=103, Expect=3e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=142, Expect=4e-35]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013682 {REF} {Length: 4028} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=4e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=6e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=153, Expect=3e-38]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013691 {REF} {Length: 4523} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=9e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=8e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=146, Expect=6e-36]} {RNA1509_15754, RNA1509_52244} {RNA1310_14106, RNA1509_52244} {RNA1509_52244, RNA815_1106}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA