TomoSeq data search

Data search

Results for MligTC455_52537

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52537	492	10.24	Mlig455_043851	Neo: - Age: -	KCNIP3	Mlig455_043851 {REF} {Length: 1620} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572, RNA1509_26771} {RNA1509_26771, RNA815_13854}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52537

492

10.24

Mlig455_043851

Neo: -

Age: -

KCNIP3

Mlig455_043851 {REF} {Length: 1620} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572, RNA1509_26771} {RNA1509_26771, RNA815_13854}

Cumulative graph for MligTC455_52537

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.378	3.69	0.75830	1.00000
RegionR2	0.359	3.69	0.51667	0.89219
RegionR3	-0.342	3.69	0.48311	0.98453
RegionR4	-0.129	3.69	0.82906	1.00000
RegionR5	-0.976	3.69	0.05105	0.19041
RegionR6	0.419	3.69	0.37102	0.95142
RegionR7	0.663	3.69	0.23100	0.85453
RegionR8	-0.372	3.69	0.64739	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.205	3.69	0.08628	0.78990
RegenerationR2	-0.566	3.69	0.24664	0.69432
RegenerationR3	0.109	3.69	0.84860	0.99812
RegenerationR4	0.461	3.69	0.42161	0.82618
RegenerationR5	0.755	3.69	0.16690	0.59340
RegenerationR6	-0.577	3.69	0.29198	0.64238
RegenerationBL	-0.463	3.69	0.47916	0.84466
RegenerationTP	-0.616	3.69	0.38855	0.82157

Genes with expression patterns similar to MligTC455_52537

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52537	492	10.24	Mlig455_043851	Neo: - Age: -	KCNIP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043851 {REF} {Length: 1620} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572, RNA1509_26771} {RNA1509_26771, RNA815_13854}
2.	MligTC455_48942	1132	23.58	Mlig455_065618, Mlig455_065630	Neo: - Age: Down-Down-Up		1.717	-	-	-	-	0.754	0.963	Mlig455_065618 {REF} {Length: 2944} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_5564_0_1, dd_Smed_v6_5564_0_1, [Score=188, Expect=5e-51]} {RNA1509_19669, RNA1509_53121} {RNA1310_5673, RNA1509_19669, RNA1509_53121} {RNA1509_19669, RNA1509_53121, RNA815_17154} Mlig455_065630 {REF} {Length: 2933} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=191, Expect=3e-51]} {RNA1509_19669} {RNA1310_5673} {RNA815_17154}
3.	MligTC455_20840	378	7.87	Mlig455_023078	Neo: - Age: Up-Down-Up	H6PD	0.98	-	-	-	-	-	0.980	Mlig455_023078 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=99.1]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=84.2]} {Human: ENSG00000049239, H6PD, hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase, [Score=167, Expect=3e-43]} {Mouse: ENSMUSG00000028980, H6pd, hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase), [Score=173, Expect=2e-45]} {Dmel: FBgn0004057, Zw, Zwischenferment, [Score=140, Expect=3e-35]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [Score=136, Expect=6e-34]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [Score=130, Expect=3e-32]} {RNA1509_16416} {RNA1310_9105} {RNA815_2264.1}
4.	MligTC455_27927	110	2.29	Mlig455_047594, Mlig455_067424	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_047594 {REF} {Length: 233} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452} Mlig455_067424 {REF} {Length: 2126} {RNA1509_6383} {RNA1310_17474} {RNA815_9083}
5.	MligTC455_27232	381	7.93	Mlig455_000862	Neo: - Age: Up-Down-Down	OXR1	0.961	-	-	-	-	0.961	-	Mlig455_000862 {REF} {Length: 4070} {TRANSSPLICED} {Pfam: TLD [PF07534.18, score=75.9]; LysM domain [PF01476.22, score=23.1]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [RH, Score=118, Expect=3e-27]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [RH, Score=120, Expect=5e-28]} {Dmel: FBgn0013576, mtd, mustard, [RH, Score=117, Expect=5e-27]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [RH, Score=109, Expect=8e-25]} {Smed: dd_Smed_v6_5399_0_1, dd_Smed_v6_5399_0_1, [RH, Score=122, Expect=2e-29]} {RNA1509_18814} {RNA1310_16271} {RNA815_8145}
6.	MligTC455_53150	224	4.67	Mlig455_036588	Neo: Int S/G2/M Age: -		0.956	-	-	-	-	-	0.956	Mlig455_036588 {REF} {Length: 1437} {RNA1509_20954} {RNA1310_9776.1} {RNA815_6133.1}
7.	MligTC455_41434	736	15.32	Mlig455_034800	Neo: Irradiation Age: -		0.955	-	-	-	-	-	0.955	Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952}
8.	MligTC455_39828	163	3.39	Mlig455_058050	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_058050 {REF} {Length: 1095} {TRANSSPLICED} {RNA1509_22785} {RNA1310_33331.1} {RNA815_22461}